Gene detail

Detail information of Am06G015490.1 Annotation

Gene ID	Annotation
Am06G015490.1	auxin response factor 19

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G015490.1	mRNA	Chr06	59964393	59971633	-

Sequences

CDS:

>Am06G015490.1
ATGTTATTGGACAACTTTGTGGTAGGCACCAAAAGGGATTATTTTTATTATTTCTTGTTTGTTTCTGGAGAAGTGCTGCTGCTATTGTTAGGAACAAGGTTAAATTTTGTTGCAAGAAAAAGACCAAGTGTTCAACTTGTTTGGGGATATCAATTTTTTAAGGTTGCAATGAAGGTTCCTTCCAATGGTTACTTGCCTAATTCTGGTGAAGGAGAAAGGAAGAGCATTAATTCAGAGTTATGGCATGCCTGTGCTGGACCATTGGTATCTTTACCTCCAGTTGGAAGTCTTGTGGTTTACTTCCCTCAAGGACATAGTGAGCAAGTTGCAGCATCTATGCAAAAGGAGGCAGATTTCATACCCAGTTACCCTAACCTTCCATCCAAGTTGGTTTGCATGCTCCACAATGTTGCCCTCCATGCTGACCCTGAAACCGACGAGGTCTATGCACAGATGACCCTTCAACCTGTAAATAAATATGACAAGGAAGCCATGCTTGCTTCGGACATGGGTCTTAAACAAAACCAACAACCTACTGAATTCTTTTGCAAGACTCTTACAGCTAGTGACACTAGCACTCATGGTGGATTTTCAGTGCCTCGTAGAGCCGCTGAGAAAATATTCCCACCTCTGGATTTTTCAATGCAACCCCCAGCTCAGGAGATTGTTGCCAAAGATTTGCATGACACTACATGGACGTTTAGACATATTTATCGCGGACAACCAAAGAGGCATCTATTGACTACTGGTTGGAGTGTATTTGTAAGCACCAAAAGGCTTTTTGCTGGAGATTCTGTTCTTTTTATCAGGGATGAAAAGCAGCAACTTATGTTAGGTATAAAGAGATCCAATAGACAGCAATCAGCACTATCTTCATCAGTAATATCCAGTGACAGCATGCATATTGGCATTCTTGCTGCTGCAGCTCATGCTGCTTCAAATAACAGCCCATTTACTATATTTTATAATCCAAGGACCAGCCCTTCTGAATTTGTGATTCCATTGGCGAAGTATAATAAAGCCCTATACACTCATGTTTCACTTGGAATGAGATTCAGAATGATGTTTGAAACTGAGGAGTCAGGAGTACGCAGATATATGGGCACAATCACTGGTATCAGTGACTTGGATCCTGTGCGATGGAAAAATTCACAGTGGCGCAATCTTCAGGTTGGTTGGGATGAATCAACAGCTGGTGAGCGGCCAAGTAGAGTTTCGATTTGGGATATTGAACCAGTAGTGACTCCTTTCTACATTTGCCCACCTCCTTTTTTTAGGCCCAAGTTCCCCAAGCAACCAGGAATGCCAGAAGATGAGTCTGACATTGAAAATGCTTTCAAGAGAGCTATGCCGTGGCTTGGAGATGACCTAGGCATGAAGGATGCCTCAAGTTCAATGTTTCCTGGTTTGAGTTTAGTTCAATGGATGAGCATGCAGCAAAATAATCAGTTCTCTGCTGCACAATCAGGGATTTTACCTCCATCCATGCTTTCATCAAATACACTGCATGGTAACCTTAACACTGATGATCCTTCCAAGATATTGAACTTTCAAGCCCCTGTCCTCTCTTCACCAAACCTTCAATTTAACAAACCTAATTTACCAAACCAAATCAATCAATTACAACAGTCTCCAACCTCATGGCCTCCGCAGCAGCAACAGCAGCAACACCAGCAGCAGAAGCTGCAGTCGTTGTTGCAATCACCGTTAAACCAGCTCCAGCAGCAACAGAGGCAACCGCCTCAACAGCCTCAACAGCCCCAACTGCCTCAACAGAATGCACAGCAGCCACAACAACTGCAAAACCAGCACCAGCACCAACACCAACAGCCGTCTCAAAATACTATGATGAATAGCGGGACAGTTGCTTCTAACCAGATTCTAAATCAGTGTGTACAGCAACCGTTGCCATACTCTCATCTTCAGCAACAGTTACTATCTGGAAGTATCTCACCCCAACAAAATTTCCAGTCGGTTAGTAAGAATGCGTTGAAAATGACATCCTTACAACAAGAGTCACAATTTCAGCAACAGTTAGATCAGCAAGCGAGTCTCTTACAGAGGCAGCAACAGCAGCAACAGCAGCAACAACAGACTCAGTTGCAACAATCTCCCTTGCAGTTATTGCAGCAAAGCTTGTTACAAAGGGCACAACATCAGCCTCAAATGAATCAAATGTCACAGCAAAACACCTCCGAGCAACAACAACAACAGTTACAGTTGCTACAAAAGTTGCAGCAGCAACAGCAACAGCAACAACAACAACAGCAATCCCTTCTGCAGCAACAAAATAGTCACCAACAAAACCAGCAACTGCAGCAGCTGCCTCAATCACAGCATCAGCCTCAACAGCTTGGCAACAATACATTCTCAATGGAGAAGTTTCTAAACAACAACTACTCTTCTTCAGCTCCAATGCATTCACAGCAGCTTCCGGTGAACCATCCACAGAATACACAGAAATCACCGACTAATACTAGACCGCTCTCTGCTCATACAGATGGAGACGCCCCATCATGCTCAACTTCGCCGTCTACTAATAACTGTCAGATATCTCCGTCAAACCCCCTCAAAAGAAATCAATCTATCACATTAGGGGGACCTTCAGTAGTTGAACACACCAATAATCTGATACAGGAGCTTCATAGCAAGTCTGACATGCAGATGGAACACGAATTACCCGGTGTAAGAGGAACCGACAAGCAAAAATATAAAGGGGCGATTACTGAGCAGCTTGAAGCTTCTACTGGAACATCATATTGTATCGATACTGGCAACATCCACCAGAACTTCCCGCTTTCCAACTTCTGCATGGACGGGGATGTTCACTCACAACCTAGAAATAATCTACCATTTGCCTCTAATTTTGATGGATTAACACCTGATCCTTTACTCTCAAGGGGTTATGATTCTCAAAAAGATCTTCAAAACTTGTTGTCTAATTATGGCGGTGCTCCGAGAGACATTGAAACCGAGCTTTCTACTGCTGATATTAGTTCACAGTCTTTTGGGGTACCAAACATGTCTTTTAAGCCAGGATGCTCAAATGATATTGCTATCACCGATACTGGAGTTTTGAATAATGGCTTGTGGTCTAACCAGAATCAACGAATGCGAACATATACCAAGGTTCAAAAATGTGGATCTGTTGGAAGATGTATCGACGTCACACGTTACAAGGGATACGAAGAACTCCGGCATGATTTGGCTCGTATGTTTGGGATTGAAGGGCAGCTAGAAGATCCTTTAAGGACTGACTGGAAACTAGTATATGTGGATCACGAAAACGACATTCTTCTGGTCGGTGATGACCCTTGGGAAGAATTTGTAAGCTGTGTTCAGAGCATAAAGATATTGTCATCTGCTGAGGTACAACAAATGAGCTTGGAGGGGGACTTGGGTAATATTCCAATCCCAAATCAAGCTTGTAGTGGATCAGAAAGTGGAAATGCATGGAGGGCACAGTATGATGATAACTCTGCAGCCTCATTTAATCGATAA

Protein:

>Am06G015490.1
MLLDNFVVGTKRDYFYYFLFVSGEVLLLLLGTRLNFVARKRPSVQLVWGYQFFKVAMKVPSNGYLPNSGEGERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLVCMLHNVALHADPETDEVYAQMTLQPVNKYDKEAMLASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLMLGIKRSNRQQSALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRTSPSEFVIPLAKYNKALYTHVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPEDESDIENAFKRAMPWLGDDLGMKDASSSMFPGLSLVQWMSMQQNNQFSAAQSGILPPSMLSSNTLHGNLNTDDPSKILNFQAPVLSSPNLQFNKPNLPNQINQLQQSPTSWPPQQQQQQHQQQKLQSLLQSPLNQLQQQQRQPPQQPQQPQLPQQNAQQPQQLQNQHQHQHQQPSQNTMMNSGTVASNQILNQCVQQPLPYSHLQQQLLSGSISPQQNFQSVSKNALKMTSLQQESQFQQQLDQQASLLQRQQQQQQQQQQTQLQQSPLQLLQQSLLQRAQHQPQMNQMSQQNTSEQQQQQLQLLQKLQQQQQQQQQQQQSLLQQQNSHQQNQQLQQLPQSQHQPQQLGNNTFSMEKFLNNNYSSSAPMHSQQLPVNHPQNTQKSPTNTRPLSAHTDGDAPSCSTSPSTNNCQISPSNPLKRNQSITLGGPSVVEHTNNLIQELHSKSDMQMEHELPGVRGTDKQKYKGAITEQLEASTGTSYCIDTGNIHQNFPLSNFCMDGDVHSQPRNNLPFASNFDGLTPDPLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTADISSQSFGVPNMSFKPGCSNDIAITDTGVLNNGLWSNQNQRMRTYTKVQKCGSVGRCIDVTRYKGYEELRHDLARMFGIEGQLEDPLRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLEGDLGNIPIPNQACSGSESGNAWRAQYDDNSAASFNR*

Promoter(3k):

>AM06G015490.1
GAACCAGTGAACCTGGAGCAAGCCTTGAATCACAAACAGTGGAAGGAAGCCATGATTGACGAGTTGAAGTCAATAGAGAAAAATGGTACTTGGAAGCTAGTCGAACTTCCAAAGCAGAAGAAGGCAATAGGTGTGAAATGGGTCTACAAGACCAAAGTCAAACCTAATGGAGAAGTGGCCAAGTATAAGGCCAGGTTAGTAGCCAAAGGTTTCCTACAGAAACCTGGTTTGGATTTCAATGAAGTCTTTTCCCCTGTAGCCAGAATCGAAACAATAAGATTGGTAGTGGCATTGGCAAGTCACAGAGGCTGGCCCCTACATCAACTTGATGTAAAGTCAACATTTCTCAATGGACCTCTGGAGTAGGAAGTCTATGTTTTCCAACCACCTGGTTTTGAGTCGAAGGGACAAGAAGACAAGGTATTCAAGCTTGAAAAGGCCCTATATGGACTCAAGCAAGCACCAAGGGCATGGAACAAGAGAATTGATTGTTTTCTCTTAGCTCAGAAGTTCATTAGATGCACCAATGAACATGGTGTATATGTTAAGAAGAATGGAACTTCGACTCAATTGCTACTGTGCCTGTATGTAGATGATCTACTAGTAACTGGCAGCAATGAGGTCGAAGTCGAAGCCTTTAAGAAAGTGATGATGTCTGAGTTCGAAATGAGTGATCTAGGACACTTATCATATTTCTTAGGAATGGAATTTACAGAGTCGAAGAAGGGAGTATTTCTGCATCAGTCGAAGTATGCAGCTGATATCCTGAAGAGATTCGACATGATTAACTGTAAGGAGGTTTCGACACCAACTGACACAAGCAACAAGCTGTCGAAAAATGATGAAGGGATTGAAGTAGATGCCACCCTCTACAAACAGATTGTGGGATCCCTGAGGTACCTGTGCAACACTCGACCTGAAATTATGTTTAGTGTCGGAATGATCAACAGATTCATGGAGAAGCCGAAAAGCTCCCATCTAGTAGCTGCAAAAAGAGTGCTAAGGTATATAAAGGGAACACAAAGTTATGGTATTCTCTTCCCTAGCAAGTCTGAGTCGAAGAATAACGCTGCAGTGTTTGGTTACACAGACTCCGACTGGAGTGGAGACAAGAGTGATCGAAAGAGCACAAGTGGGTATGTCTTCATGCATGGAACGACACCCATCTCTTGGTGCTCGAAAAAGAAAAGTATAGTTGTGTTATCCTCTTGTGAAGCAGAGTATGTGGCTGCTTCCTTTACAGCATGTCAAGCATCATGGCTGAGCATGTTATTGGTCGAAACTGGGCTGCACAGGATCGAAGCAATGAAGTTGTTGATCGACAACAAGTCTGCGATTGATCTCGCTAAGAACCCTGTCACACATGGTAGGTCGAAGCACATAGAGACCAGATATCACTTCCTGCGTGATCAAGTCAACAATGAGAAGCTGATGCAATGACCAAGCCATTGCAAAAGGGAAGATTCGAAGAACTGAAAACTATGCTTGGAATGATGTCACTTAGCAATGTGAATTAAGAGGGAATATTGAGATATGGTTTGTAATTCAATTGCTTGTAAATATAGGTAGGCGCTAGTAATACATATAGGTGTAGTAAGTAAGCCTATTATGGGCCTAGTCGAAAGTGTGGGCCTGGTCGAAATCATGAGTCTGGCTTATCTATATATATACGTAGTAGCATGTACAGTTACATATTCTTGTGAAGAACGATTTTACATAATACAGTTTTACTGCATCATTGTCTTGCCCTAACTTTCTCTTCTCTCTAGCGCTTTCGCCCCTTTCCCTCTCTCCTTGCGCCGTTTTTCCCCCAACACCTCTCCCATGTTCGCACAATACTTTAATCGATGTCGGTTTGATAAAAAAACAATAAAAACGAATTTCAGTGCATAAACTTTGACATGATTGATTTTTCTTTTGTTTTTTTTTGTTATATTGACACCGATAAGGTCTTTGCTAAGGACCCATGCAAACGCCGTTAGAGGACCATAAACATATGCTTGCAAGAGAAAATGTTGATATTCGTTAAAGTTTGAAGTAATTTTCAAGTGTCGGACTTGTATTTTCTGGATCGAATCATTGCTGGCTATCAATAAAGTGCCCTAACACTTTTAACGAATAACTAATCTCCACTCGTGTGTAAGAACAAATTTCGCTAAGGTCATGACATAATTTATCGAGTACAAGGGTTGAAGCATACTTAAAGCGTTAAACCACCCAAAAATGACCTTAGCTACAAGTATAATACGGCGCATCTTTAATGAGTTGTTTATAACCATGCCTGTCTGTGATTGATTACTTAAGCGCTATATTTGATGTCGGCTTGTTCACATAAAGCAAAATAAAAATAACAAAGCTGTCTTGCTTTTGTTCACCTCTCTCTGATTTCCCGGCGACAAGTCAGTTTCCTCAGCTTTGGTCTTACAAACAAACATCACCCTGCTCCCTCTTCTCTCTCCCTCCTTACCTTAATCCTAACGAAGCTACACTTCCCCATTTTCCACTTTTCCAATTTTAGCTACTTCCTCGGTTCCTCCTTCTCTTTCTGTCTTTGTTCTTGATTCATCTCATGATTCTGTTGGTTAATAAGATGCCTTGAAGGTGATCCCTTTTGCCTTGTTTTTTACTACCTTTTTGTTTTGTTTTGTTTTGTTTCACTTTTTTATGTTTTTTTTTTTAATTTGTTTGAAATGGACAGATTTTGGCTTGTTGGATGCTATAAGCTTCACTTGTTTTCTATGGTTTTGTGGGGTGGATGTTTCAGTTGCAAAGTTTTGATTTTTTGATTCATGCACAACAAGAGATTTTCATTTATTGGGATTTACTAATTCCTTTTGAAGATTCAGCACTGGAACTTGTGGTGGGAGATTGAGATTTGCTTGTATTGTTGGTGGAGTAAATTGCAGATTGAAGAGAGAAATTGGAGGCTTTGTGTTCAGTTTTTCTTCTATTTGTTGAATTTTGGAACATTTTTGGGGGAAAAGGGGTGAACTTTTTGTT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF06507.16	Auxin_resp	308	390	7.50E-36
PF02362.24	B3	182	283	2.90E-21
PF02309.19	AUX_IAA	1036	1125	4.80E-09

Gene family

Gene family	Subfamily
Transcription Factors Family	AUX/IAA
Transcription Factors Family	B3
Transcription Factors Family	B3-ARF

Gene Ontology

GO term	Description	Category
GO:0009734	auxin-activated signaling pathway	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0003677	DNA binding	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR000270	PB1 domain
IPR015300	DNA-binding pseudobarrel domain superfamily
IPR003340	B3 DNA binding domain
IPR010525	Auxin response factor domain
IPR044835	Auxin response factor
IPR033389	AUX/IAA domain

trEMBL

trEMBL term	Description
A0AAN9L6P3	_

SwissProt

SwissProt term	Description
ARFS_ARATH	Auxin response factor 19

KEGG

KO	Description	Enzyme
K14486	auxin response factor

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G19220	auxin response factor 19
Medicago sativa L.	MsG0280008452.01.T01	_
Oryza sativa L.	LOC_Os06g09660.1	auxin response factor, putative, expressed
Cucumis sativus L.	Csa012237	_
Glycyrrhiza uralensis Fisch.	Glyur001170s00029947.1	_
Codonopsis lanceolata	Cl_chr04_56000T	_
Arachis hypogaea L.	AH13G27820.1	Auxin response factor 19 like

Expression pattern