| Gene ID | Annotation |
|---|---|
| Am06G014430.1 | Transducin family protein / WD-40 repeat family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G014430.1 | mRNA | Chr06 | 49774588 | 49782704 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00400.35 | WD40 | 381 | 420 | 6.80E-25 |
| PF12265.11 | CAF1C_H4-bd | 67 | 133 | 1.80E-18 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DWD |
| Epigenetic Regulators | NFC4 |
| GO term | Description | Category |
|---|---|---|
| GO:0006338 | chromatin remodeling | Biological Process |
| GO:0005634 | nucleus | Cellular Component |
| GO:0031491 | nucleosome binding | Molecular Function |
| GO:0006355 | regulation of DNA-templated transcription | Biological Process |
| GO:0004402 | histone acetyltransferase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR001680 | WD40 repeat |
| IPR022052 | Histone-binding protein RBBP4, N-terminal |
| trEMBL term | Description |
|---|---|
| A0A1S2XHB1 | _ |
| SwissProt term | Description |
|---|---|
| MSI4_ARATH | WD-40 repeat-containing protein MSI4 |
| KO | Description | Enzyme |
|---|---|---|
| K10752 | histone-binding protein RBBP4 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G19520 | Transducin family protein / WD-40 repeat family protein |
| Medicago sativa L. | MsG0280011173.01.T01 | _ |
| Oryza sativa L. | LOC_Os01g51300.2 | WD domain, G-beta repeat domain containing protein, expressed |
| Cucumis sativus L. | Csa001792 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000299s00021234.1 | _ |
| Codonopsis lanceolata | Cl_chr02_03760T | _ |
| Arachis hypogaea L. | AH13G25350.1 | WD-40 repeat-containing protein MSI4 like |