Gene detail

Detail information of Am06G013260.1 Annotation

Gene ID	Annotation
Am06G013260.1	SET domain protein 25

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G013260.1	mRNA	Chr06	42047878	42063542	+

Sequences

CDS:

>Am06G013260.1
ATGGCTACCCGGTTTGCCGCAGCTGCACCATCGGCTCAACAAGCGTTTGATTCTGACACTGATGATTTGTTTGATGATCTTTTTGAGTCCGGCAGCTTGGAAAGTGTGGATATGGAGATTGATGCGAAACAAATAGTAAAGAATGACGTGGAAGAAGTGAAAATAGGTCTTTACACTGATACTGCATTTTTATTCTGCTGGATTTGGAGTATTGGTGATATTCCCTCTCGTGGCAATATTGATGATAAAATTGGTCCATGTTCTAGAATGGAAATGAGCTGCCAATCAAACGTTAATGGTGATGCTCCCGTGTGTTCCACGACAGTAAATATTTCACACCCGCACCAGAATTTCTGTGGCTATGTGCAACAGCCTTCTTTTGTGAGTGGATGGATGTATGTGAATGAACAAGGGCAAATGTGTGGTCCCTATATTAAGGAGCAGTTATATGAGGGCCTAACTACTGGTTTCTTGCCATTTGAGCTTCCTGTGTATCCTGTGATCAATGGCACAATAATGAACCCTGTACCATTGAATTATTTCAAGCAGTTTCCTGACCATGTTTCTACTGGGTTTGCATATCTAAGTATGGATATATCAGGCACAAGGCTACCTACAAATTGCTCCTCCTCTTCTAAAGATATGTCCATAAATGGGCAAGATAAATCTTTTGAGCATGCTGCTCTTCCTGCTGTTAACCCTGATTCGAAGTCTGTTTTGCAGTCACATGACAATTACTGCATTAAAGAATCCAATCACTTAAATTCAAACTCAGAGTTTGGAGAAGAGTCCTGTTGGCTTTATGAGGATAAAAAAGGGATGAAACATGGGCCACATTCCATTTCAGAATTGATTTCTTGGCACCACCATGGATATCTTGAAGATTCAACAGCGATCTCTCATTTTGACAATAAGTATGAAACCTTTGTGTTACTGTCTGCTGTAAACGCATCGAAAGGAGACATATCTGGAACCATTTGTATATCAGGTTCCAAAAGCAACGGAGTTGGTAATATGGTGAACTTAGTTGGTGAAATATCAGAAGACATTTCTTCCCAATTGCACACGGGTGTCATGAAAGCTTCCCGCAGAGTCATGCTAGATGGGATTATTGGCGATATCATTGCAGAATTTATTACTGAAAAGAAATGCAAGAGGCATAAGCCTGAGTCAACTGATCGGACTTCTGAAAATTGCATGTTGGACAATAAAATGATGAATAAACGTACTTCCATCCAAAGCAAGCATTCACCTTCCCATGTTTTGGATGATCATGAAATTTCCAGACCATCTTCAATAAGTGTTAAGGCGGTTGGAAGCATTGAAAATTTTTGGTGGTCATATGCTGTTGTTCGTAAAGTACTTCTTGATTATTGTTTGCAAGTCATGTGGAATGCAGTGTTTTATGACACTGTAGCGGATTACTTATCTTCTTGGAGGAAGAGGAAATTTTGGTCTGATCCTAAGCCTGATAGGAACCAATATCTATCAAGGCCTCAATCATCTGTTAATGAAAAGATTAAATCAGAAGCGTTGGTTCTCAGGGACAATTCATCTGTATGCAATGTTGATAGTGATATGGAGTCCAGAGGGATGGCGGCAGAGAGAAATTGTCATCCCGAGTTACCTAACAGCCAGAAAAGCGGAAATTTACTAAAAGATCAAAGAGTTTCATGCAGTTATCATAACTCCAAAGATTTGACATGCATTCTTGAAAGTGTGGAGAATGAGCTTCACTTCTCTTCGAAGGCGTCTTTAGCTGGTTACATTCGGAGTTTTGTTGAGAAGGAAGTAAACCAATTAATTCCTTCCCTAGAGAAAGACAAATTTAGCGAGGTTGCTGTTAGTGACTGTGGTTTCTCAGAGATGCTTACGGGTAAAGCATTTGTGAACGAGGAAATTCAGAAGGCCAAGTCTAGGGATTCTGTGATAAGTGGAGACTCGTTTGGCGTGGCTGCATCTGGAAACCATATGTCTAATGTATTCGCAAAAGCATTTAAAGAATTGTGTGGTCATTTAGATGACGTGGTTGATGAAGAGGAGATTGGTGACCTACCACCTGGATTCGAAAATAACTCTCAAACAAGTTTCCCGATCTACAATGCAAAATTTCGACCTTCTAGATTAGTTGAATGTAATCCTAAGATTACAGAATATGTTGCAACTGCACTTTGCAGACAGAAGCTGCATGATGAAGTTCTAGAAGACTGGAAGGTGTCGTTTCTTAATTCTGCAATTAATAAAGTTTTTACGTTATCATGTACCAAAAAGAAACACTTTCAGTCTCATGGTCATGAGAAGGGGAAAACGTTCAGTATCAACAAGGAACATTTGAATGATTCTATTGCTACTTCTGGACTGGGAAGAGTGAAGGAAGACGCAAAAAGTGCCGGAGTTCCTCTGGTGATTGGAAAGTATACATATTACCGTAAGAAGCTATCACGGAAAGAGCCTTGCTCCTCTCAGTCTGTTATGGAAGATGATTCAGGGCCAGTGAGGCGGCCTATGGCTAAGTTAATGAAACATGTTTCTGGAGATGTGGGTGTGACTGCAGAAGTTAAAATAGCTGCTATGAAACGTGAAAAGGCTAAGATGATAAAAGGGAAGAAGGATACATCTTCTAAGGGCAGGCCTTCTCCTATCAATGTCAATAGTAGTTCACCCAGTGCTCAATTATCCTTGAAGAATAAAACTAGTCAGAAAGTATTGAAATTTTCACGTGCAGTTCAAAATGATGTTATGAATGCTGGGAAGTCTAATGATAAGAGGATTTTAGTGCCAACTGATATTAGTGTTGGTGTGAAGGTGGTTAAAAGCAATAGCTCTAATGGCACCATTCAAAGGAAGACCACTGGTCATTGCTCGAGAGAGAAACTAAATGAATCAAATAAAGTATCAAAATCAAAAAGGAAGCATCAAACAGATGGTGTGACATCCTCACATCCTGCTAAGGTTTTGAAATTTTCAAATAAGGGTGCAAATCTGGGAGCTAGCAAGCAGGTAACTATTGCACAGAGGAAGTTTTCTGAATCCAAGCCGTTAGATTTATGTCCTAGATCTAATGGATGTGCTAGGACTTCTATTAGTGGGTGGGAATGGCACACATGGTCTCAAAGTGCTAGCCCTGCATGTAGAGCACGCGTCAGGGGTCTTCCACGTGTACAAAAGTGCCTTGAATCTGAAAATAATTCATCTCAGTTGTCAAATGGTAAGGGTCTTTCCGCAAGAACAAACAGGGTGAAATTGCGTAACCTTCTTGCTGCCGCTGAGGGTGCGGATCTTCTGAAAGTGCCTCAGTTGAAGGCACGGAAAAAACGATTACGTTTTCAACGGAGCAAGATACATGATTGGGGTCTTGTTGCCTTGGAGCCAATAGAAGCAGAGGACTTTGTGATTGAATATATTGGAGAACTAATTCGTCCTCGGATATCTGATATACGTGAGCGTCAATATGAGAAGATGGGAATCGGAAGCAGCTACCTTTTTAGACTGGATGATGGTTACGTGGTTGATGCTACAAAGAGGGGTGGGATTGCAAGATTTGTTAACCATTCTTGTGAGCCCAACTGTTACACAAAGGTGATATCTGTTGAGGGTCAAAAGAAGATTTTTATATATGCAAAACGGCATATAAATGCTGGTGAAGAAATTACATACAATTATAAGTTTCCCTTGGAGGAGAAAAAGATTCCCTGCAACTGTGGTTCCAAAAAGTGCCGTGGATCAATGAATTAG

Protein:

>Am06G013260.1
MATRFAAAAPSAQQAFDSDTDDLFDDLFESGSLESVDMEIDAKQIVKNDVEEVKIGLYTDTAFLFCWIWSIGDIPSRGNIDDKIGPCSRMEMSCQSNVNGDAPVCSTTVNISHPHQNFCGYVQQPSFVSGWMYVNEQGQMCGPYIKEQLYEGLTTGFLPFELPVYPVINGTIMNPVPLNYFKQFPDHVSTGFAYLSMDISGTRLPTNCSSSSKDMSINGQDKSFEHAALPAVNPDSKSVLQSHDNYCIKESNHLNSNSEFGEESCWLYEDKKGMKHGPHSISELISWHHHGYLEDSTAISHFDNKYETFVLLSAVNASKGDISGTICISGSKSNGVGNMVNLVGEISEDISSQLHTGVMKASRRVMLDGIIGDIIAEFITEKKCKRHKPESTDRTSENCMLDNKMMNKRTSIQSKHSPSHVLDDHEISRPSSISVKAVGSIENFWWSYAVVRKVLLDYCLQVMWNAVFYDTVADYLSSWRKRKFWSDPKPDRNQYLSRPQSSVNEKIKSEALVLRDNSSVCNVDSDMESRGMAAERNCHPELPNSQKSGNLLKDQRVSCSYHNSKDLTCILESVENELHFSSKASLAGYIRSFVEKEVNQLIPSLEKDKFSEVAVSDCGFSEMLTGKAFVNEEIQKAKSRDSVISGDSFGVAASGNHMSNVFAKAFKELCGHLDDVVDEEEIGDLPPGFENNSQTSFPIYNAKFRPSRLVECNPKITEYVATALCRQKLHDEVLEDWKVSFLNSAINKVFTLSCTKKKHFQSHGHEKGKTFSINKEHLNDSIATSGLGRVKEDAKSAGVPLVIGKYTYYRKKLSRKEPCSSQSVMEDDSGPVRRPMAKLMKHVSGDVGVTAEVKIAAMKREKAKMIKGKKDTSSKGRPSPINVNSSSPSAQLSLKNKTSQKVLKFSRAVQNDVMNAGKSNDKRILVPTDISVGVKVVKSNSSNGTIQRKTTGHCSREKLNESNKVSKSKRKHQTDGVTSSHPAKVLKFSNKGANLGASKQVTIAQRKFSESKPLDLCPRSNGCARTSISGWEWHTWSQSASPACRARVRGLPRVQKCLESENNSSQLSNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFVNHSCEPNCYTKVISVEGQKKIFIYAKRHINAGEEITYNYKFPLEEKKIPCNCGSKKCRGSMN*

Promoter(3k):

>AM06G013260.1
ATAAATTGGAAGAATAACCGTCTGGCATTTTCAACTCTTTTATCCACTGATAAACTGCTTTCGCTTGTTCGGTAGATAAAGTATAATTGGCTTTGGGTTTCAAAATCCTAGTACCTTGCTCAACCAGAATTATTTCTATTTTGATGGTGCCATGTCATTTGGCCTAAACCCATTATTGTACAAATGAAGTCTAACTTCATGTTCATTTTTTATAGCTCGAAATGAACATTTCAAGCACGGACATCTAATACCGCCTTGTCGCCCAAATTCTTCATGATCAATGTACTTAGCACAAAAAATAAACTATTCTACTCCTTCTACAAAACGTCGTTTTACACCAGTTCTTCCAGGATACAATCGATCATACATCCAACTACGATCCATTTTCAAGAACTATACGTATACTACACTACAATATAAATAAAATAAACTATCAATTACTTCATATTTTGATATATATATTTATATATTACTCATTTTATTTTGATATTTCAATAAACTACCAATTAATTAGCAACAGAATTAATTTTTTAATAATGTTATATACTAATAATTTAAACATTATAAATAATAATTCCAAATTTAATTTTAAATTTCAATTTTTATAAGACAATATATGTTAATAAAATTTATAAGTGAACTTAATAAATAAGTTTTTTCAATATAAATTAATTTGTATTATTATTGCAAACAAAATTTGTAACAAAATTTTACTAAAAATAGTGAAGTAAGTAATATTTTATTAATTACTTTAACAACTAACCGTAGTGAAGAGAAGGCTCTGGCTTGAAGCTTATTCTGAACTCAAGCAGAGAGGAAAAAGGAGGAACCCAAACAATACCTAAACAAAAAACAACACAATTAGTAACAAACTCATATTATTATAAAATAATTTAAAAACAAATATTAAAAAAAAAATTAAAAACTAAAACTATTAACTCATATCAAAAACATACCTTGAAGAAATTTCCCAATAAGAGCAGAAGACAATTCGTAGGGAGGGAGGAAGCGCTTTTGAGATTTAGTAGAGAAGGAGAGAATTTGGAGAGAGTAAAAGAGAAATTTTAAGAAGAGAATGGGAGGATTGTTAGAAGTGTGAAGAATGAGAAGTGGGGAATGGATATATATAGGAAAACGCAGCCAACGGTCAAAAGGTCATATCCGCCGCAATAGGAGATTTGCGGCGGATCATGGGTCTTTGCGGCGGATTTTGAAATTTATTATCCGCGGGTTTTTTTTACGGAGCTTTGCGGCGGATTATGGAGGTTTGCGGCGGATTTTGAAATTTAATATCCGCGGGTTTTTTTTTTACTGAGTTTTGCGGCGGATTCTGGGTCTTTGCGGCGGATATTCAAATTAAAATACCGCGCATTTTTTTTTAAAAAAACACCAAACAATCCGCCGCAAAAGCCACAATCCGCCGCAAATATCCGCCGCCAATACTCAACATCCGCCGCAAACGACACAAATCCGCCGCAAAGTACCATTTTTTTTTTAAAAAAAAATTATTATTTTTTTTAAAAAAATTATTATTATTTTTAAAAAAAAAATTTATTTTTTTAAAAAAATAGTTTTAATTAAAAATATATATTATTTTATTAAATTTTTTAATTATTGATAAAAAAATAAAATCCAATAACTAATTAATTTTTAATTTAAAAAAATAAAAATTGGGAAAAGCAGTAAAATATTATCACCAAAAAAATATCCATACAATTAATAAAATATCCATACAAAAAAATAAAATAATCTAAAGCAATAAAAATTGGGAAAAGCTGTAAAATATATATTTAATGTCTGCTACCCCTAAACAGAGACCTACGCCATTATCTTGATATGACACTCTCTTGAGCATTGTCGGCAGCAGCTCCATTACAGTGGCGTATGTCTCCATTTCTTTGTAAAGAAATCTCCACATTGTCGTGAACACCCCTTCATCTTTTTCGTTAAAAGTAACCCATTTATCAGCAAAAAGCTCCTCCTCATTATTTCCACCACAAGTGACATATACGTTAATCAAACGCTCGGTATCATCCTTCAACTTAACAGCCCGTCCTTGCAGTTCCTCAAACTTTCTATTTAGAGATTCAACCATATTTTCAAAATAGAAAGTTTCACAAGAAACCATCTTTTGAAAAGATGATTGAATCTCTAAATAGAAAGTTTGAGGAACTGCAAGGACGGGTTGTTAAGTTGGAGGATGATACCGAGCGTTTGATGAGCGTATATGTCTCTTGTGGTGAAAATAATGAGGAGGAGCTTTTTGCTGATAAATGGGTTACTTTTAACGAAAAAGATGAAGAGGTGTTCATGACAATGTGGAAATTTTTTTACAAAAAAATGGAGACATACGCCACTCTATTGGAGCCGCTGCCGACAATGCTCAAGAGAGTGCCGTATTAAGAGAGTGCCGTATCAAGAGAATGAGAGTATTGGTCGAGGTGTGAAAAAGAAGAAGGGGAGAAGGCGTTTATATAGGAGAAACCAAGTCAAACGGTCAAAAGGCATGATCCGCCGGAAACTGCAGTTACCGGCGGATTTATGGGCTTTGCGGCGGACTAGAGGGATTTGCGGCGGACGGAGTTGAATTTGCGGCGGTTTATGAATTTCAAAATTGGCAAATATCCGCCGGAAATAACCTTACCGGCGGATTGTTAAAATCTCGTAAAAAAAATAAATTTTTGTAATCCCAAATCCGCCGCAAAATCCAAGTCGAAAATTAATCCGCCGCAAAAGTCAATTATTTCGCCGGTAACTTTGCGGCGGATAAAATCCGCCGGAAATGCCTACAATCCGCCGGAATATTTGCGGCGGATCTATATCCGCCGGAAACTCCTGGCCGGAAAAATCAATTATTCTTGTAGTGTACGCATGCTCTTACCTTGCCGCGTATAATATCCATTGAAGATATGTCTGGGAACAAGTTCCCTGGTACTATGCATGTTGATCGGCACTGAGTCCCCTATATCCAAACGAATACGTTTAGCGTCTGTGCAAAAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00856.31	SET	1117	1221	1.20E-21

Gene family

Gene family	Subfamily
Transcription Factors Family	SET
Epigenetic Regulators	SDG25

Gene Ontology

GO term	Description	Category
GO:0006418	tRNA aminoacylation for protein translation	Biological Process
GO:0003723	RNA binding	Molecular Function
GO:0004812	aminoacyl-tRNA ligase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR046341	SET domain superfamily
IPR001214	SET domain
IPR003616	Post-SET domain
IPR037841	Histone-lysine N-methyltransferase SETD1A/B-like, SET domain
IPR044570	Histone-lysine N-methyltransferase Set1-like
IPR035445	GYF-like domain superfamily
IPR003169	GYF domain

trEMBL

trEMBL term	Description
A0A1S2XE53	_

SwissProt

SwissProt term	Description
ATXR7_ARATH	Histone-lysine N-methyltransferase ATXR7

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G42400	SET domain protein 25
Medicago sativa L.	MsG0280008128.01.T04	_
Oryza sativa L.	LOC_Os12g41900.1	SET domain containing protein, expressed
Cucumis sativus L.	Csa016500	_
Glycyrrhiza uralensis Fisch.	Glyur000043s00003848.1	_
Codonopsis lanceolata	Cl_chr07_24230T	_
Arachis hypogaea L.	AH04G11490.2	Histone-lysine N-methyltransferase ATXR7 like

Expression pattern