Gene detail

Detail information of Am06G013120.1 Annotation

Gene ID	Annotation
Am06G013120.1	cellulose synthase A4

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G013120.1	mRNA	Chr06	41310432	41316140	+

Sequences

CDS:

>Am06G013120.1
ATGGCCTCAAACACCATGGCTGGCTTGATCACTGGCTCTCATTCTCATCTCTCACTTGACTCTGATGAGCATAAGCCTCCTTCGCGACAATCTTCATCGAAAACGTGTCGAGTTTGTGGTGATGAGATTGGAAACAAGGAAAATGGAGACCTGTTTGTGGCTTGTCATGTGTGTGCATTTCCTGTTTGTAAACCTTGCTATGAGTATGAGAGGAGTGAAGGGAATCAGTGTTGCCCTCAATGCAGTACTCGCTATAAGCGTCACAAAGGTTGTCCTAGAGTGGTTGGAGATGAAGAGGAGAATCTTGATGCAGATGATTTTGAAGATGAGTTTCAAATTAAGAATCCTCATGATGATCTAGACCAGCATCGTGATGTTAATCATGTGGAAAATGGGGATTACAATCAACAGAAACTGCATTTTGATGGACAAGCTTTCTCTTCAAAAGGAAGTGTTTCTGGCAAGGATTTTGAAGGAGAGAAAGAATTCTACAGCAATGCAGAATGGCAAGAAAGAGTAGAGAAATGGAAAGTCAGGCAAGAAAAGAGAGGTTTACTAAACAAAGAAGATGGAAAAGAAGACCAAGTTGAAGAAGATGATTACCTTATGGCGGAAGCTAGGCAACCATTGTGGCGCAAGGTTGCAATACCTTCAAGCCTAATCAATCCATACCGCATAGTGATCGTGATGCGCCTTGTTATCCTCGCTTTCTTCTTCCGCTTCCGAATACTAACTCCAGCATATGATGCATATCCCTTATGGCTTATATCTGTGATATGTGAGATATGGTTTGCACTATCATGGATACTTGATCAGTTCCCTAAGTGGTTCCCCATAATGCGCGAAACTTACTTGGAACGTTTATCCATAAGGTTTGAGCGTGAAGGGGAACCAAACCAACTTTCACCTGTTGATGTCTTTGTGAGTTCTGTGGACCCTTTGAAGGAACCACCTATTATAACAGCAAACACTGTTCTGTCAATACTTGCTGTTGACTATCCTGTTGAGAAAGTCACATGCTACGTATCAGATGATGGTGCTTCTATGCTTCTGTTTGATTGTTTGGCAGAAACTGCTGAATTTGCAAGAAGGTGGGTTCCTTTTTGCAAAAAGTATAATATAGAGCCAAGGACACCTGAGTACTATTTTTCTGAGAAAATTGATTACTTGAAGGATAAAGTGCAGCCTACATTTGTCAAAGAAAGAAGGGCTATGAAGAGAGAATATGAAGAATTTAAAGTTAAAATTAATTCTTTGGTTGCAAAAGCTCAGAAAAAACCAGAAGAGGGTTGGGTTATGCAGGATGGAACTCCATGGCCCGGGAACAATACTCGTGATCATCCAGGAATGATTCAGGTATACTTAGGAAGTGCTGGTGCACTAGATGTGGAAGGCAAAGAACTACCAAAACTTGTGTATATTTCGCGTGAAAAACGCCCCGGCTATCCTCACCACAAGAAAGCTGGTGCCATGAATGCTTTGGTTAGAGTTTCTGCTGTGCTTACAAATGCACCATTCATGTTGAATCTGGATTGTGATCACTACATCAATAATAGCAAGGCTCTCAGAGAGGCAATGTGCTTTCTAATGGATCCACAACTAGGGAAAAAGCTTTGTTATGTCCAATTTCCACAAAGGTTTGATGGTATTGATCGCCACGATAGATATGCTAATCGCAACACTGTTTTCTTTGATATCAATATGAAAGGGCTTGATGGGATTCAAGGTCCAGTTTATGTTGGTACTGGAACTGTGTTCAACAGACAAGCATTATATGGCTATGATCCACCAGTGTCTGAGAAAAGACCAAAGATGACATGTGATTGTTGGCCTAAATGGTGCTGTTTTTGTTGTGGTTCAAGGAAATCCAAGTCAAAAAAGAAGTCAGGAACAGGAATAGGAAAAGGTCTCTTTAGTAGATTGCACAAGAAAAAGAAATTGATGGGCAAAGATTATGTTAGAAAAGGGTCTGGTTCCATGTTTGATCTTGAAGAGATTGAAGAAGGACTTGAGGGTTATGATGAGCTAGAGAAATCATCCCTTATGTCCCAGAAAAATTTCGAGAAGCGATTCGGACAGTCACCGGTTTTCATTGCTTCTACTTTGGTGGAAAGTGGAGGACTTCCTGAAGGCACCAATACTCAATCATTGGTTAAGGAAGCCATTCATGTCATAAGCTGTGGCTATGAAGAGAAAACTGAATGGGGTAAAGAGATTGGATGGATTTACGGCTCGGTCACAGAAGATATATTGACTGGATTTAAGATGCACTGCAGAGGATGGAAATCAGTATATTGCATGCCAAAAAGAGCAGCTTTCAAGGGGTCTGCTCCAATCAATCTATCAGATAGGTTGCATCAAGTTCTGAGATGGGCTCTTGGTTCTGTTGAGATTTTCCTTAGTCGCCATTGTCCATTGTGGTATGGTTATGGAGGAAAATTGAAGTACCTAGAGAGAATGGCTTATACTAATACCATTGTTTATCCATTCACTTCCATCCCTCTCATTGCATACTGCACAATTCCAGCTGTGTGTCTCCTAACTGGAAAGTTTATCATTCCTACTCTGACCAACCTTGCTAGTGTTTGGTTTATGGCTCTATTTATCTCCATCATTTTAACCGGTGTCCTCGAGCTCCGATGGAGTGGAGTTAGCATTGAAGACTGGTGGCGTAACGAGCAATTCTGGGTCATTGGAGGTGTTTCTGCACATCTTTTTGCTGTGTTTCAAGGTCTACTTAAAGTTCTAGCTGGAGTAGACACAAATTTCACAGTCACAGCAAAAGCAGCAGATGATGCTGAATTTGGAGAACTCTATATGTTCAAGTGGACTACTCTTCTCATTCCACCAACCACTCTTATAATCTTGAACATGGTTGGAGTTGTGGCTGGAGTTTCTGATGCTATTAACAATGGTTCTGGTTCATGGGGACCTTTATTTGGAAAGCTATTCTTTGCATTTTGGGTTATTGTTCACTTATATCCTTTCCTTAAAGGTCTCATGGGAAAACAAAACAGGACTCCTACCATTGTAGTGTTGTGGTCAATCCTTTTAGCATCAATTTTCTCATTGATTTGGGTAAGGATTGATCCTTTCTTGCCTAAGCAAACTGGTCCAATACTCAAACAATGTGGAGTAGAATGCTAA

Protein:

>Am06G013120.1
MASNTMAGLITGSHSHLSLDSDEHKPPSRQSSSKTCRVCGDEIGNKENGDLFVACHVCAFPVCKPCYEYERSEGNQCCPQCSTRYKRHKGCPRVVGDEEENLDADDFEDEFQIKNPHDDLDQHRDVNHVENGDYNQQKLHFDGQAFSSKGSVSGKDFEGEKEFYSNAEWQERVEKWKVRQEKRGLLNKEDGKEDQVEEDDYLMAEARQPLWRKVAIPSSLINPYRIVIVMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWFPIMRETYLERLSIRFEREGEPNQLSPVDVFVSSVDPLKEPPIITANTVLSILAVDYPVEKVTCYVSDDGASMLLFDCLAETAEFARRWVPFCKKYNIEPRTPEYYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVKINSLVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPKWCCFCCGSRKSKSKKKSGTGIGKGLFSRLHKKKKLMGKDYVRKGSGSMFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLVESGGLPEGTNTQSLVKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERMAYTNTIVYPFTSIPLIAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYMFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC*

Promoter(3k):

>AM06G013120.1
GTCTATTGTTATTGTAGTTGGTTATGTTTTATCTTTTATCGCATGAATGAAATCGAAATTTTAATGAAACTCCACAAATATAATAAACAAGAAATAATAATAATCAAGTCATATAAAAATAGTTCAAACATACAATCCCACAAAACCCCCTAGTCACGCCTCGGTAGCATATCCAGTAACTGCGTGAGGTGAGCGTATGTCTGACTACCCATCCTAATGTCTCCGCTCCGAAGCCCCCTCCGAATCTCCTCCTCCACAATCTCGAGCAAATCTGGCTGTACTGGTGGTGGTGGTGGTGATGCAACCCATAAGAGTCTAGGAATAGATGCTCTCACATACCAATGTAAGTAGTCCGAAGCAACCTGACCCAACTCCTCAGCAGGATAAGTAGTACGCAAAACCTCATCCACCACAGGCATATAATGTGCAATACGAAAAATGCAGTCTGCATGGCTCAGACGACCAGTAAGGGTGACGTGGGATGACCTGCACGTACCCAAACTGTCTGAGGCACCTATCTGGCATGTAGGGAACAGTGATGTCTCCCCAGATGATGTGTCCCATGTATAATGACACCTGCTCAAAGTCTCTATTCCCCCGGTGCTTCTCAAACGGTCGCCAACAGACATCATCCGAGGTCAGCGCATCAATCCTCTGCTTGTATAACCCCAGCTTCACTCCATCTGTCTTCTTCTTCCTCCAACGCCCACACAGTGCTCCAGCCGGTAATCCACTCCTCCTCTCCACTAGCTGAGAAAAATACCATAAAATCCAGCTCTGAAATGCAAAGATAAACAACATGGTTCAGCTAAAAACTGTTTAACAGAAATTTAACCAAACTCGAAAAAATAAATCTAAAATTATTACCTGTAATAGGGTCGCATACCCTCCTAACTGATGCGCTTGGTCCAAATAAGAGTAATTCAGTTGGTCATACATGAAAGCAAGCCCTGCTGCCCCCATGCATATGATCCAACAGCAGCTGCACTGACGTCCTCAAGTAGAAGCAGCCACTTAGCCTCAGCCCTGTCGCGCGGTCTTGACAGTGAAGATGGACCAGCTCAGGATCAGAAGGATAAAGGCGCTGACAGCAGGACGCATGTCTTTCTGTATGGACCCTCTACTAACTATCTCCTGCAGCCACTCAAAACGGAAATATGGACCAGAAGAAGCTCAACACTCCAGCCCCGCCTCCTCAACACTCCAGCCCCACCTCCTCCATAGTCACTCCTAGATAAACATGTGCTAGGTGGATGGCCTGATCAGTGGTGACAGAAGTAGGTGGAGCTCTGTAGTAGTTCCCCGTAATGGGTAGATGCAGCAAACATGACACATCATCCAAAGTAATCATCATTTCACCAAATGGTAAGTGAAATGACGATGTCTCTGAGTGCCACCTCTCAAGAAAAGCAGACATCAGCTCATGGTCCACTTTTGTATGTCCGGTCAAGACGAGGGGGATTAATCTGGAACCTGTGATATACTCCCACAACTGGTGGTTTTGGGAATACCCAAGTAGTCTCTGACCCAGCTTGTTACCATGGTTGGTAACCTTCAATTTACGCTCATATGTCTGAATTAAAAATAAATAAAAAAATAAGGCTATGTAAATAAATTCAACTAACAAGACTATGTAAATAAATTCAACTTACCGGGTCTCTCAGAATAATGGTACAAACATGAGATGCTAGCCCAGTGAATAGAGGAGGCTGCTCCTCATGCTGCTGTGGCTGATGGTAGGGCTCCTCCTGGTACTGCTCCTCCCAGTGGTGATGTTGCTGATACTGCTACTGCTAATACCGCTGCTGCTCAGGCATATACTGGTCCTCATACATAGACTGGTCTGAGGACATAGAATGCTCATCAAAAGGGTGCCCCTGCTGGCCCTCCTCATAGTGATAGTCTGGGGCCTCCTCCACCTCCACCGACTGCTGCTGTTGGCTACGCCGGGTAGACGCATGTCTCGCAATCCTGTGGCGGGTGCGTGTACTGGGAGCAGATGGCGAGGCCTGAGCCGAGGACTCCCCTCGATACCTATTGGACACTGGAAAAAACAAACAAATTGTTAAACAAAAATCAGATCTAGCTATTTCTGATGCGAAATCGGATATAGGTAGATACGATGGGAAAATCGGATATAGCTAGATCCGACTTACTATTTACGCTGAATCTGAGGAAGATCGGATGTATGTAGATCCGACGGTAAAACGAATATAGCTCTCTGAATGGTAAATCCGATTTTTTCAGAAAACTTTCTGGTCAAATGGATGCAAGTGAAAAATGGTAAATGTTTTGTAAATTTGTATAAATTTTAAGGGTATTTTCGCAGGGTCCGTGGGGGTTAAAAAAAACCCCTTATTTGAGTTATGTGAATTTTGTAGTGCAAGTTTGGAATTATGGCCCAAATCATGGACTACAAATAAGCACCCCTTTTTTGTTCAACAACACCTCCACCCCCTTTTCCCAAAATACCCCTTCCTTTCTCTCTTTAGAAGTACCCCACACTATTTTACATCAACTAACAAATGTAACGATGTGACATTATAACTCCTAATGTGCAATGTGCATAATCTTTATGCATACATTAAGAATTAGAATAGACGCCTCCATAACAAGTTTCCATTTTCCTCTGCTTGAGGTTGGGACGTGACATTATAACCAGCTTATGCTTATGTGAAATATAAATAAATACACCAAACAAGACGTATCTTATTAATCAACGTAATGAAGAACTAGAAAGAGACACCTCCTTTCTTTAAGTCCAAGCAAGTAAGCAAACAAGCTTATATAAAAAGAAAAGCACTTCACACCTATCACTTCCTTTCTAACGTCCCTTAGACTCAAACTCATGACCCTCCAACTCACCGTTTGGTACTACACACTCTTCCATCAACAACCATCCATGTTTTAGAATCTGATGTTTCATTCCCAACCCACCATTTCTTATTTAACCCTCTTCTTCTTTACTCTTCTTTGGAATTAGCTTTGCTTTGCCTTGCC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03552.17	Cellulose_synt	304	1041	0
PF14569.9	zf-UDP	27	101	2.50E-36
PF13632.9	Glyco_trans_2_3	740	865	5.60E-06

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT2

Gene Ontology

GO term	Description	Category
GO:0005802	trans-Golgi network	Cellular Component
GO:0005886	plasma membrane	Cellular Component
GO:0009833	plant-type primary cell wall biogenesis	Biological Process
GO:0046872	metal ion binding	Molecular Function
GO:0071555	cell wall organization	Biological Process

InterPro

InterPro term	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR029044	Nucleotide-diphospho-sugar transferases
IPR027934	Cellulose synthase, RING-type zinc finger
IPR005150	Cellulose synthase

trEMBL

trEMBL term	Description
G7INF0	_

SwissProt

SwissProt term	Description
CESA4_ARATH	Cellulose synthase A catalytic subunit 4 [UDP-forming]

KEGG

KO	Description	Enzyme
K10999	cellulose synthase A	[EC: 2.4.1.12]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G44030	cellulose synthase A4
Medicago sativa L.	MsG0280008107.01.T01	_
Oryza sativa L.	LOC_Os10g32980.1	CESA7 - cellulose synthase, expressed
Cucumis sativus L.	Csa008409	_
Glycyrrhiza uralensis Fisch.	Glyur000755s00017981.1	_
Codonopsis lanceolata	Cl_chr06_35860T	_
Arachis hypogaea L.	AH04G11280.1	Cellulose synthase A catalytic subunit 4 [UDP-forming] like

Expression pattern