Gene detail

Detail information of Am06G012900.1 Annotation

Gene ID	Annotation
Am06G012900.1	Leucine-rich repeat transmembrane protein kinase

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G012900.1	mRNA	Chr06	40012185	40016449	-

Sequences

CDS:

>Am06G012900.1
ATGAAGACCGTAATAGTTGCACTTCTGTATCTCTTGGGTTTTTCTTCTACCCTTTCTCATGCTACTACTTCAGATGGTGAAACTGAAAGCACTATGAGAGTGCTTTTGGAGGTGAAATCATCCATTTCAGAAGATCCTCAAAATGTTCTAAGTGGTTGGTCAAAAAATAACACAGATTACTGTAGCTGGAATGGGGTTTCATGTGGGTTAAAAAATTTGAATGACTCGGTGCAAGTGCTGGTGGGGCTCAACCTGTCTAACTCGTCACTCACTGGGTCAATATCACCCTCACTCGGTTATTTCCAAAATCTGCTTCATCTTGATCTTTCAAATAACCATCTGACGGGTCCCATTCCACCTACTCTCTCCAACCTCACTTCACTGGAATCTCTGCTTCTTTTCTCCAACCAACTCACTGGTCCCATTCCCACCGAGTTAGGCTCGTTACTGAATCTCCAAGTCCTAAAAATCGGCGACAATACATTCACAGGTGCGATTCCCACGTCATTTGGCAATCTGGTCAATCTTGTTACCCTTGGTTTAGCTTCATGCAATCTCACAGGTTCAATTCCACCCCAACTCGGTCGACTCACTGAGTTGGAGAATCTGATCCTACAGAACAATGAGTTGACCGGTCCGATTCCCTCCGAGTTAGGGAACTGCTCAAAACTCATCTCATTTAGAGCTTCTGACAACAGACTCAACGGCACAATCGCGAGTAAACTGGGTCAACTCAGAAAACTCCAAACCCTCAATCTTGCCGATAACAGCTTAACGGGGGAGATACCAAGTCAACTCTGTCAAATAAGTGAGCTGAATTATCTCAATTTAGAGCGAAACCAGCTTGTGGGTCATATTCCACGGTCATTAGCTCAATTGGGTAACCTTCAAAATCTCTTCTTGGGAATGAATAAACTGAGTGGAGGAATTCCAAAAGAGTTTGGTAACATGGCTCAGTTAATACACATGGTTCTCTCTGGGAACCCACTTTATGGTACAATTCCAAGAATCATATGTTCAAATTCAACAAATTTGGAGCAATTTGAGGTATCAAGATGTGAACTTACTGGTGAGATTCCTGCTGAGTTCAGTAAATGCCAATCATTGAAGATCCTTGATTTGTCTAACAATACTCTCGATGGGTCAATACCTTCTGAGATTTATTGGTTGGTAGGGTTAACTGATCTATTGCTTCATAACAATAGTTTAGTTGGTTCAATTTCTCCCTTTATAGGAAATCTAACCAACTTGCAAACACTTGCATTGTATCATAACAAGTTGCATGGTGATTTGCCTAAAGAGATTGGGAGACTTGGAAAATTGGAATCACTACTTCTCTATGATAATCAATTGTCCGGTAAGATACCTATGCAGATTGGGAACTGTTCAAGATTGCAAGCATTTGATTTATTTAGGAATTCTTTTAGTGGTGGAATTCCTTTTACTATTGGAAGGCTAAAAGAGTTAAGTTTCCTCCACCTTAGGCAAAATGAGCTTGTGGGAAAAATTCCAGCTAGTATTGGTAACTGTCATAAATTGAATCTGTTGAATTTGGCAGAAAATCAGCTTTCTGGTGGCATTCCTTCAACAATTGGATTTCTCAAAGGCTTGGAGCAGCTTCTGCTTTACAATAATTCATTTGAAGGTAGTCTTCCTCATCAATTGGTAAACTTAGCAAACTTGACTTTTGTTAATCTTTCAAAGAACAAATTTAATGGAAGTTTGGTTCCATTATGTAGCTCTAGATTCTTTATTTCTTTTGATGTCACAAATAATGAATTTGATGGTGAAATTCCCTTTCAACTTGGAAACTCTATTTCCCTTGAGAGACTAAGATTAGGTTACAACAAATTTTCTGGGGAAATTCCAAGAACATTGGGAAAAATCATTGATTTGTCATTGTTAGACTTATCAGGAAATTCACTCACAGGACCAATACCAGATGAACTATCTTTGTGTACTAAATTGTCCTACATTGATTTAAACAATAATCTTCTATCTAGCCACTTACCTTCATGGCTTGGAAATTTTCCTATGTTGGGAGAACTTAAACTCTCTTTCAATCAGTTTTCTGGACCTCTTCCACTAGGCCTATTCAAACTACCCAAGTTGTTGGTTCTTTCCTTAGATAGTAATTCTCTCAATGGAAGTTTACCAAGTGACATTGGTGATCTTGAATCTCTTAATGTACTCAAACTTGATAACAATAGTTTCTCTGGATCGATTCCTCCTGCAATAGCGAAATTGAGAAATCTTTATGAGCTTCATCTGTCGAAAAATAGTTTTGAAGGGGAAATACCAATTGAGATTGGAAATCTGCAAAATCTGCAAGTCATTTTAGACCTGAGTTTCAATAATCTTTCTGGTCACATTCCACCTTCACTTAGTATGCTGTCAAAGTTAGAAGCTCTTAATCTATCTCACAATCAACTTTTCGGAGAAGTTCCTCTATCCATTGGTGAAATAGTGAGCTTGGAAGAGTTTGATATCTCTTACAATGATTTTCAAGGTGTATTGGATAAGAAGTTGTCTCATTGGCCATATAAGTCATTTGAAGGAAACATTCATCTTTGTGGAGCCTCTCTTGGAAGCTGTGACCGCGACAGTGCTTCTAGAAATAAGCTAGGAGGCTTAAGTGAGAAATCAGTGGTTATAATCTCAGCTATTTCAACTTTAGCTGCAATTGCTCTTCTGATATTTGCAGTCAACATGTTCTTGAAGAAAAGGCAAGATTTTTTCAAGAAAGGAAGTGTAGTTAGTTGGGTCTTTTCCTCCACTTCTTCACAAGCAAAGAGAAAATTGTTGTTCCCACTAAACATTGGTGGAAGGAGAGATTTCAAATTTGAAGAAATAGAGAAAGCCACAAATAATTTAAGTGATGAGTTCATAATTGGTTCTGGAGGTTCAGGAACAGTCTACAAAGTTGAATTTCCTAATGGAGAGATCGTGGCGGCCAAGAAGATTTCGCGGAAAGATGAATATATGTTAAATAAAAGCTTTATAAGAGAAATGAAGACTTTGGGGAGCATTAAGCATAGACATCTTGTGAAGCTTATTGGTTGTTGTAGTAATAGAAACAAAGGAATGGATTGGAATCTGTTGATATATGAGTACATGGAAAATGGAAGTGTATGGGATTGGCTACATGGAAAACCTCTCAAAGCAAAAGCAAGTCTTGACTGGGACACAAGGTTTAAAATTGTTGTGGGATTGGCCCAAGCAGTGGAGTACCTTCATCATGATTGTGTGCCAAAGATCATTCATAGGGACATCAAATCCAGCAATGTATTGCTAGATTCTAAAATGGTGGCACACTTGGGAGATTTTGGATTGGCAAAAGAAATCTTTGAGAATCTTGACTCTAATACTGAGTCAAATTCTTGTTTTGCTGGGTCTTTTGGTTACATAGCTCCAGAATATGCATATTCAATGAAGGCAACAGATAAAAGTGATATTTACAGCATGGGAATTGTGTTTATGGAACTTGCTAGTGGTAAAGGACCAACAGATGCAGCTTTTAGATCAGATATGGACATGGTGAGATGGGTGGAGATGAACCTTAACACGCAAGGAACTGAGCGCGAGGAACTGATAAATCCTGAACTTAAACCCCTTTTACCTGGTGAAGAGTTTGCTGCATTCCAAGTTCTCGAAATCGCCATACAGTGTACCAAAGCTGCACCACAAGAGAGGCCATCAGCGCGACAAGTATGTGATTTTCTTCAGCATGTTTCTAAGAACAAGAAGGTGAACTTTGAGAAGATGAATTTGGATCATTGCAACTGA

Protein:

>Am06G012900.1
MKTVIVALLYLLGFSSTLSHATTSDGETESTMRVLLEVKSSISEDPQNVLSGWSKNNTDYCSWNGVSCGLKNLNDSVQVLVGLNLSNSSLTGSISPSLGYFQNLLHLDLSNNHLTGPIPPTLSNLTSLESLLLFSNQLTGPIPTELGSLLNLQVLKIGDNTFTGAIPTSFGNLVNLVTLGLASCNLTGSIPPQLGRLTELENLILQNNELTGPIPSELGNCSKLISFRASDNRLNGTIASKLGQLRKLQTLNLADNSLTGEIPSQLCQISELNYLNLERNQLVGHIPRSLAQLGNLQNLFLGMNKLSGGIPKEFGNMAQLIHMVLSGNPLYGTIPRIICSNSTNLEQFEVSRCELTGEIPAEFSKCQSLKILDLSNNTLDGSIPSEIYWLVGLTDLLLHNNSLVGSISPFIGNLTNLQTLALYHNKLHGDLPKEIGRLGKLESLLLYDNQLSGKIPMQIGNCSRLQAFDLFRNSFSGGIPFTIGRLKELSFLHLRQNELVGKIPASIGNCHKLNLLNLAENQLSGGIPSTIGFLKGLEQLLLYNNSFEGSLPHQLVNLANLTFVNLSKNKFNGSLVPLCSSRFFISFDVTNNEFDGEIPFQLGNSISLERLRLGYNKFSGEIPRTLGKIIDLSLLDLSGNSLTGPIPDELSLCTKLSYIDLNNNLLSSHLPSWLGNFPMLGELKLSFNQFSGPLPLGLFKLPKLLVLSLDSNSLNGSLPSDIGDLESLNVLKLDNNSFSGSIPPAIAKLRNLYELHLSKNSFEGEIPIEIGNLQNLQVILDLSFNNLSGHIPPSLSMLSKLEALNLSHNQLFGEVPLSIGEIVSLEEFDISYNDFQGVLDKKLSHWPYKSFEGNIHLCGASLGSCDRDSASRNKLGGLSEKSVVIISAISTLAAIALLIFAVNMFLKKRQDFFKKGSVVSWVFSSTSSQAKRKLLFPLNIGGRRDFKFEEIEKATNNLSDEFIIGSGGSGTVYKVEFPNGEIVAAKKISRKDEYMLNKSFIREMKTLGSIKHRHLVKLIGCCSNRNKGMDWNLLIYEYMENGSVWDWLHGKPLKAKASLDWDTRFKIVVGLAQAVEYLHHDCVPKIIHRDIKSSNVLLDSKMVAHLGDFGLAKEIFENLDSNTESNSCFAGSFGYIAPEYAYSMKATDKSDIYSMGIVFMELASGKGPTDAAFRSDMDMVRWVEMNLNTQGTEREELINPELKPLLPGEEFAAFQVLEIAIQCTKAAPQERPSARQVCDFLQHVSKNKKVNFEKMNLDHCN*

Promoter(3k):

>AM06G012900.1
TTAGCTAGGGAATTAGCGACGGAATCAGTCCCTCGCCAAACTGCTCCTCGCTAGTGGTAATTAGCGAGGGAATTTGAATCACTCGCTAATTAGCGAGGGAATATTCCGTCGTTAATTCCCTCGCTAATTAGCGAGGGAATATTCAATCGCTAACTCTGACAGCAACGTTTTTTTTTATATTAGCCTATTTTTTATATAGTTGTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATGGTGTGGTGGTGGTGGTGGTGGTGGGGAAGGGTATTAGGGTAGAGAGAGAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGAGAGAGATGAGCTATGTGGTGGTGGTAGTGGTGAAGGGTATTATGGTAGAGAGAGAAGGAGAATAGTAAGGGAGAAGGAGAGAAAGAGAGGGAGAAACGAGTGGTGGTGGTGGTGGTGAAGGGTATTAGGGTAGTGAGAGAAGATAGAGTGAGAGAAGAGTGTGAGGAGGTGGTGGTGTTGGTGTGGTGGTGGAAGAGTGAAGAGAGAAGAAGAGTGTGAGAGGAGGTGGTGGTGTGGTGGTGGAAGAGTGTGAGAGGAGTTGGTGGTGTGGTGGTGGAAGAGTGAAGAGATAAGAAGAGTGTTAGGAGAGAAGAAGAGAGAAGAGTGTGAGGAGAGTAGGAGAGAAGAGTGGCGTGTGAGAGGATAAATAAGCTGAAAAGTTAGAAATTTAGCGAGGGAATTAGCGAGGGACTGACAATTCCGTCGCTAAACACCAGCACGAAGTCCTATCATCTAAAAGCTGTCAGAAATTAGCGAGGGAATTAGCGAGGGACTGACAATTGCATCGCTAAACACCTGTACGAAGTCCTATCATCTAAAAGCTGTCAGAAATTAGGGAGAGACTGAAAAATCCGTCACTAATTAGCGAGAGACCTAAAAGTCTGTCGCTAATGACAGAATTAGCGAGAGACTAAAAATTCTCTCGCTAATTCCCTCGCTAATAAGCTTTTTTTTTTGTAGTGGGCTATTTGATTTATTTATGGCTTAGTGTTTGATTTATCCACATATTTGGGGCCTAAGGCAATTGCCTATATTGCCTTGCATGTTCCACGCCCCCCCCCCCCCCCCCCGCCGCCTGGGTTTAGATGAATCGTCGGCGTTCTCAGACACTCCCTTTTCTACCATCAAGATCGTTGACGCTATCTGAACCTGTTTGAAGCTATTGTCGATTTCATTCTGGATTTGAGCATTGAGGATTTGAAGCTATTTTTTTTTTATAAGCGATTTGAAGCTATTGTTGATTCCATCAGGGAGATTGGGTTTCTAGATCTGATCTTAATTTCTTGCTGATTTTCATTTTAATTTCAATCTGATTTTGTATTTGTTTTTAATATTTTATTTATCTTAATTATTAGTATTTGATGTGGTAAGTATATGTGGCATCATTAAGTGACGTGTGCAAGCTGCATCAGCTGCCACGTCATTTAATGAGGGCCACATCAGTTTTTTTTGGCAAGATTTCAACTCAGTAAAAAAACAAAAAAAAAAATTTCATTTAGACAAAATGTCTGATTTTTTTAAAATAAGAGGACTAAATGTCTTAGTTATCAAATAGTGGGACAAAAGCTATAATTTAGCCTAATTTTTAATTGCACTTTTGGTGCCTCAAAATCACGAGTTTTTTTTTCTGCATTTTTGGTTCATAAAATCTTGAATTTAGAAGGACCAAAATTGCAATTAAAAAACATAGAAACAAAATTGACACATAGAGAAAATAGTGAGACCAAAATGGCTAAAATAAAATAGAGGAACCAATAGTGCCAAATTGAGAAAGTTGGTGGACATAAATTCACAAAGTCCTTTAAAATCTTATGAAATAAATTCATTAAAATCCTAACTACAAATCTACGAGACTTTAACGACATAAATCCATTAAAATCTCAACTGTAAATTTTTTAAAAGTGTTATAAAATTATTACATTCCTACATAGTCTTTAAAACCACGGGACTTTTTTATGGCAAAATTGTCTTTTAAAATCTCAATTCAATACACCCTTGTTAAACATTCTTCATTATGTGTTCCATTTAAATTTATGATCATCATAACTAACTAATGTCCAGTTTGTGATAGAGTGATTTGGGAGTCATTACTTAGTTTAGAGTGCTTTCTATTAACTTGGCAACAAAATACAACTTTGTTAGGATTGGAAGTTTTGTACGTTTCTTTAATTTTTGGATTTATTCTAGCTCTTGGTTGCTTATGCTAGAAGTAAATCTTGTTGACTATGTTATGACTTTTGGCAATTAGCAACAAGTATTTTGTCCCAAGTCTTTCCGATTGTAACATGCATCCTTTCTCTAACCCAATATCTTCACGACTTCATTTATTCCTTTCTCATTAGTTCAGTTGCACTATTTTCAGACTCAAAAGTCAAAACAACAAAATCTCTACCATCTTCTCTAACCTATTTATCGACCGATTTCCTTTTTATGCTACCTTCCTTATACCCATTTTGACTTTCTCAATATTCACCTTATCTCATACAATACTAACTACACATTTTTTGACAAAAATTAATGCTTGCCAGTGGTTTATGAGTGTGATGACTGACATAGTCCATATCCTCATCTATCTTCATTAATATGCACTACTTACAATATGCATTCATGCATGAATGATCAGAAACTAGCCAACCATGTGAAAGGTTATTATATATATGGCTTCTCCCTATGTATCTATCTCTTCTGCTATAAAACACCACGCGTCTTCTCACAATCCAAGATCAACTACCTCCACCACCGCTTTCCCCAACCCCAACTCTACAACTACCTCCATTAATTTTCATTTCATTTTCTTTCTTCACGCAACACATGACTAATATTTGCATGCAATTCAACCCAAGAGTTTTGTGTTATAACTTCTCAGCTTTGCTAAGTTTTTAACACACAATCTCTACACACTAATTAAATTGCTTTAACG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF13855.9	LRR_8	271	330	6.30E-49
PF13855.9	LRR_8	750	811	6.30E-49
PF00069.28	Pkinase	963	1238	3.20E-44
PF07714.20	PK_Tyr_Ser-Thr	963	1240	2.00E-38
PF08263.15	LRRNT_2	34	68	1.70E-10

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.12.4:RLK-Pelle_LRR-XI-1

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0071944	cell periphery	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0033612	receptor serine/threonine kinase binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR003591	Leucine-rich repeat, typical subtype
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A1S2XER9	_

SwissProt

SwissProt term	Description
GSO1_ARATH	LRR receptor-like serine/threonine-protein kinase GSO1

KEGG

KO	Description	Enzyme
K13420	LRR receptor-like serine/threonine-protein kinase FLS2	[EC: 2.7.11.1]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G20140	Leucine-rich repeat transmembrane protein kinase
Medicago sativa L.	MsG0280008066.01.T01	_
Oryza sativa L.	LOC_Os07g31500.1	leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed
Cucumis sativus L.	Csa014398	_
Glycyrrhiza uralensis Fisch.	Glyur000234s00015068.1	_
Codonopsis lanceolata	Cl_chr02_45300T	_
Arachis hypogaea L.	AH13G50180.1	LRR receptor-like serine/threonine-protein kinase GSO1 like

Expression pattern