Gene detail

Detail information of Am06G012740.1 Annotation

Gene ID	Annotation
Am06G012740.1	homolog of yeast sucrose nonfermenting 4

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G012740.1	mRNA	Chr06	39242665	39251146	+

Sequences

CDS:

>Am06G012740.1
ATGTTTAGTCAGAGCATGGATCCTGCAAGAGATGTAGGTGGTGCTGCAGGGACTGTGTTGATTCCCATGCGGTTTGTTTGGCCATATGGTGGAAGGAGTGTTTTTCTCAGTGGTTCTTTCACAAGGTGGACTGAGCTTGTACCAATGTCGCCAGTGGAAGGTTGCCCTACAGTATTTCAAGTTATTTATAGATTGTCTCCTGGTTATCATCAGTACAAGTTTTTTGTTGATGGAGAATGGCGGCATGATGAGCATCAACCTTATGCACATGGACAATATGGAATAGTTAACACTGTCTTATTGGCTACTGATCCCAATTACATGCCTGTTATAACTTCAGACGTTGCTCCTGGAAATAACATGGATGTGGATAACGAGGCTTTTCGCCGTATGCAGGTCCGGTTGACAGATGGTACATTGAGTGAGGTGCTGCCAAGAATATCAGATACTGATGTACAGATCTCCCGTCAGCGTATTTCTGCATTTCTATCTATGCACACAGCTTACGAATTACTTCCTGAGTCAGGCAAGGTTGTTGCCTTGGATGTTGATTTGCCAGTGAAACAAGCATTTCATATACTGCATGAGCAGGGAATATACACTGCTCCTCTCTGGGACATGTGCAAGGGGCAATTTGTTGGTGTCCTTAGTACTTTGGATTTTATCTTAATTTTAAAAGAGTTGGGGAATCGTGGGTCCAATCTGACAGAAGAGGAGCTTGAAACACATACCATATCAGCTTGGAAAGAAGGGAAGTCATATCTAAACAGACAAAACAATGGGCTCGGAACTGCATTTTCTAGACGTTTTATCCATGCAGGGCCATATGATAATTTGAAAGATATTGCCATGATGATCTTGCAAGAGGAGATTTCAACAGTTCCTATTATCCATTCACCTACTGAAGATGGTTCTTTCCCACAGTTACTACATCTTGCTTCACTTTCAGGAATACTCAAATGCATTTGTAGGTACTTCAGGCATTGCTCTAGTTCATTGCCTATACTACAACTTCCAATCTCTGCAATACCTGTGGGAACATGGGTGCCCAAAATCGGGGAATCAAATCGGCGCCCTCTTGCAATGTTGAGACCAAGCTCTTCTCTTGCTTCAGCCCTAAATTTATTAGTTCAAGCCCAAGTGGGTTCAATACCAATAGTTGATAATAATGACTCATTGCTGGATATATATTGTCGGAGTGATATAACGGCTTTGGCAAAGGATAGAGCATATACGCATATCAATCTTGATGAAATGACTGTTCAACAGGCTTTGCAGCTGGGCCAGGACGCGTGCAGTCCATACGAGCTTAGAAGTCAAAGATGTCAGATGTGTTTGCGTTCTGATTCGCTGCATAAAGTCATGGAACGTTTGGCAAATCCAGGTGTCAGGCGGCTTGTTGTCGTGGAAGCCGGAAGTAAGCGTGTAGAAGGCATTGTCTCATTGAGTGACATATTGAAGTTTTTTATCGGTTAG

Protein:

Promoter(3k):

>AM06G012740.1
AATAGCAGGGGTGTAATTTACAAAAAACACCAAGTTATCAGAGGCCCAGTCCAGTCTTGTTATTCTATGGATACAAAAAAATCCGCACGGAATCTAGGACCCGTGTACTGTAGAGACACGCGGGTTGTGCACTTGGATACGAGTCCACCCGAACTCACCACTATAAAAGACTAAACCCTAATTTTTTGCCAGTTTTTCAAGATTTTCTCTCTCTTCTTCTTTCTTCTTTCTTCGCCTTTCTCTCTGAAATCCAACTACGCCTCTACTAGGACTTGAGTCTTTCGTTGATTTCTTGCTGAAATCAACCCAGAAACTTGAAACGAAACTTCAATCACGTTCAACGAACAAGGTATGATGTTTTTCCCTTCCCAATTTCTTCTTATCCTCTTCTGATTTGAAACCCTAGTTTCAAATATTAACTTTCTGTTTCTTCCTCTTCTTGCAAGTATCAATTCTTGACACCGCAAGTCTCAATCACCACAAACGATCGAAGGTAGATTTCTTATCTTTGCTTCTGATTCTCTGAGTTGGTGAGAAACCCAGAAAACCCTAACTCGTTTTCAGTGTTTTAGATGAACAACACCACACGAAGATCCCTGTACGCACACACAAAGGTAAAATACTAAACTGAGTGCTTTTTCTTTCTTTTCTTTTAAACACAAACCCTAATTTGTGTTTTTGTTGATGTATGTATTGGAACATACGGATATTGAGAACACCTCAAGTTCTCAGAAGCAATACCTTCAATTCACGAATTAGAATCAAAGGTAAAACCCTAATCTTACTTTTTACTGTTTCCTTTTTGATTTCGGTCACTTAAATCAACTACTAACCTTTTCTTTTCTTTGCTGTGAGGTCAACAACCTCTTGTTGAAGATAATTAGTCACACAAAGAACTCAAAGGAAGATGGAGCTTGCGGAGAATGATGAATTAGCGTAAAACTCAGTAGAATAAAATGCTAGAATTAAAACTGTAAATTCTGTTTGTATTATTCAGTGTAATAATTCTGTGTACAAAGTGTAATAGCTATAGATCTATATATACAGCATAGGCAAACTCTTCTAAGAGTTTGTTACAAGTTAGTTACAAGAATAACTAACTTCTTTAACTATTTCATAACTGAATCTTGGTTAGATAAGACTGCTGGTGAGTAACGGTCATCTGTTTGAATTATATGACCGTTGCTCAAATCCTGGAGGGTATTTTAGGTTTTTATTAAAAACCAATATTCCTTTCCCTCGCGTTCACTGTTTGCATCATGCCGCAACTAGAAGCGCGAGCAGCAGCATCTCACCACCACGAGCACACACCCCACCGCCTTTAGATCGCTGGGTATCAACATGCCACTGTATCCCTCTCCTTTGCTCCAACCGAGTCAGTCTCCTCTTTTCCATGAACAATTTTTCCTCCCACAGTTCACGAACCTCCCGATCTCACCCTCTCCTCCCACATCGCGTTCATCACCCCCTATCTCTCATCACAATCCCTCTTCTTCTCTCACCCTCTAGTTCCTGAACCAAATCCCTAAACCACATTTGTAGAACCAAATCCCTATTTGAAGTTTCCAGAATCCTTAGCATCATATTTCCAGAATCCCTATTTGATGTTTACAGTTCACATCTAGAGTTTTCATTGAACAAAGGTTGGAATTTTGGATCTTGGAACAGAGGCATGAACAAGACTTTGCTGGATTCTTTCTCGAATTTTTAGGATATTTGATAGTTTTGGTTTATTACATCAAATATAAACAAGACTCTGGTTGATTCTTTCTAGAATGAGAAATTTGTTTTAGGATATAAGAAGAACATGTTTTCAATCCTGGGAGACAATGTCGCACAAATCTGTTTTTTATTTCTAGAAATTATTAATTATTTAAAAATAATTTGTTATAATAAAAATAACTTTTTAAAAAATTTAAAATCCTATGTAGCCAACTTGGCATGCCATATAAGATGAGTGAAGACCACATCAGCCTCAAGTTTGACCAAATATGGGAGGGACCTAGATTTTAGAAATTGGAAAAATAGGGGGACCAAAATCGTGAAAAAAAGTTGAGGGACTAAAATCGTGAATTGATTATAATAAGTGGACAAAAACCGTAATTAAGTCTAGTTTTTATAACACCAACTCTTAAAAATCAGTGTTTTTTTATCTTACACTCTTCAAAATCAATTTTATTTATTACTTAGTTAGTGTTTTCACCAAACTATTTTTTTGGGATGTGTTTTCACCAAAAAAAAAGGAACTGTGGGATGAGTGATGAGTTGCACGAAAATGAAAGTTTAATAAAATCAAAATCAAATAGCAGAATCACACGTGCACTTCCTATGTGATGCCTTTTACAGTTTAACTGCCACTTTTATAACTTTTTTTGCTTTAACAATTGGCACCTTCATAATGACCCTCCTATTCCAACTTTTTCTTGCTTTATTAAAAAAAAAATTAAATTTATATATTTTTTTCTTCTGTTTACCCCTTCAGGGATAAATCTCTCTCGTTTTTTCTCAACTATTTTCTTCTGATATTTCAATTTCAACAAGGTTTGGAATTTTTCCCTTGAGACTTTCTGTGCTTTGGTTTTGCCAGATTCCATTTTCAAATTCTTCGCTCTTCCAGGTTTAATTTGGTAGGTTTCATTTTCAATTTAGTGCTAGGGTTTTGTAAATGGTTTTTGCGTTTAATTAAATTGGGAGTGTTTTTTTTCATATCCGCTTCACTCTTTTCATTGGTTTTGATGCAGTGAAAAATATGTACTTTCTATTTTGATTTTTCATTTGATTAAAACATCAAAATCTGAGTTTTTTTTCCCATTGGATTTTTGATTTGGGATGAATTGTTTTTTTTTTCTCTTGTTAGTTGGGTTTTGGGATTTCTAGTGCATTGAATTGGTGCGGCATTTACTGGAATTTGCACCCTGTGAAGTGAACAAGCTGAAATGCTGAGATGAAGTGTGGTGATTGGAGGGTATTTTAGGAATAACACTCTGAATTTGAGGTGGA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF16561.8	AMPK1_CBM	21	103	5.40E-25
PF00571.31	CBS	444	489	1.20E-21

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	CBM48

Gene Ontology

GO term	Description	Category
GO:0009507	chloroplast	Cellular Component
GO:0016301	kinase activity	Molecular Function
GO:0016787	hydrolase activity	Molecular Function
GO:0016020	membrane	Cellular Component

InterPro

InterPro term	Description
IPR013783	Immunoglobulin-like fold
IPR014756	Immunoglobulin E-set
IPR046342	CBS domain superfamily
IPR000644	CBS domain
IPR032640	AMP-activated protein kinase, glycogen-binding domain

trEMBL

trEMBL term	Description
A0A8B8MI84	_

SwissProt

SwissProt term	Description
SNF4_ARATH	Sucrose nonfermenting 4-like protein

KEGG

KO	Description	Enzyme
K07200	5'-AMP-activated protein kinase, regulatory gamma subunit

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G09020	homolog of yeast sucrose nonfermenting 4
Medicago sativa L.	MsG0880047018.01.T01	_
Oryza sativa L.	LOC_Os03g63940.1	CBS domain containing membrane protein, putative, expressed
Cucumis sativus L.	Csa011711	_
Glycyrrhiza uralensis Fisch.	Glyur000894s00023634.2	_
Codonopsis lanceolata	Cl_chr05_23840T	_
Arachis hypogaea L.	AH11G30270.2	Sucrose nonfermenting 4-like protein like

Expression pattern