Gene detail

Detail information of Am06G012660.1 Annotation

Gene ID	Annotation
Am06G012660.1	Mitochondrial transcription termination factor family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G012660.1	mRNA	Chr06	38656919	38661942	-

Sequences

CDS:

>Am06G012660.1
ATGAGTTCCTATTGTCGCATAAGAACCCTTCTCCCCCTCAACTTGGTAACTTCAACATCACCATCCCCAAAACCTTTCCCATTTTCTCTCCCTTTCTCCACTAACACTTCCGATTATTCACCCTCATTCCCAGTTTCCTACCTCATCCACAATTTTGGCTTCTCCCCACAATCTGCTTCCAAACTTTGCTCCTCTTACAAACTCCGATTCAAGACCGCCGAAAACCCTAATTCTGTTCTCACCTTCTTTAAAAACCATGGTTTCTCAGACACCCAATTACACCATATGATTCAAAAAGCACCATGGCTGCTTTCCTGCAACCCCTCCAAAAGGCTTTTGCCAAAGTTTGAATTTTTTCACTCCAAAGGTGCTTCTACCTCTCACATTGTTAACCTTGTCAGTAAGAAACCATTAGTCCTGTGGCCAAGCCTGGAGGGACAAATAGTCCCAGCCTATGAATTGTATTATAGATTCATGCAATCTGACAAGGCCGCTATTGCTTTGTTAAGTCACAGACCAGCTTTGTTTGGCGATTCTCGTCTGGCACATATCATTAGAATTCTAATTGAGAATGGAGCGACAGAATCAAACATTGCAAGGTTTCTTCGGAGACAAAATAGAGTGCCCAACATACCTAACATGTTGAAAGTGATGGGGGAATTAAAGGATATGGGGTTTGATCCTTCTAAATCAGCTTTCATTAAAGCATTGCATGCCAAAACAACTGTGGCCAAAACCCAGTGGAATGAAAAAGTTTATGCTTTAAAAAAGTGGGGGTGGTCTGATAAGGATATTCTGGAAGCATTTAGAAGGCAACCTCAATGTATGGAAACATCTGTTGATAAAATAAATTTAGTGATGAGCTTTTGGGTCAATCAATTGGGCTGGGATTCTTTGGCCATTGTTAAAGGACCAACAGTTATTGGGTTGAGTTTGGATGGAAGGCTCATACCAAGGGCAGCAGTTTTGCAATATCTTTTGGAGAAAGGTCTGCAAAAAAAGAATGCAAGCTTAATTACTCCATTTCTAATTGCCTCCTAA

Protein:

Promoter(3k):

>AM06G012660.1
TCCTGTACTTAAGTCAACTTGAACCAAAAAAATTTTTTTTGGTATGAAATGGTATTTTTGCCCGAAAGCGGAGAGATTGACAAATAAGAAAATGGGCTAAGAGGATCATTTTAGATGGGTTTTGCTTTCCCCACACCCCTTCCTACTCAAAACACACCCCTTCACCCTACACATTTACTAAACTAACCCCACTTAAAATTGATTTTCCCCCTCTACCCCTCTCCCTCTTCTTCTCCTTCAACACAACACACCCCTCTAAAATCCCAAACCTCCCCCCCCCCTCTCCACTCCAAACCCACCCATCATCACCTTCATCATTCACTCCTATTCAACTACCCAACATTGGCAACTAGCTCAAGGTAATAACCCTACCAAACTTTTTTCATTTTGGTTCTGTTTTCAGTTTTTCACGCCATTTTTTTTTCTGTATTCGCGCTCCGTTCGAACAGGGTCGTTCGAACATGTTCGAATGATCGTGTTCGAACAAGTGTTTAATGGGGTGTGACTTTGCTAGGTTCGAACACCATCATTCGAACGTGTTCGCATAAGGGCGTTCGAACAGTGTTCGCATAAGGGCGTTCGAACAGGTATCCGTTGGTTGAGATCGTTGGTGTAACATCAACAGAGAAGACTTACTCTGCTGCATTTGCTTATGTCAATTGGGAGAGGATGGATAACTTTGCATGGGTTCTTGAGAAATTGAGGGGTTTATTTAGGAGACAGGATGAAGTACCACAAGTCATACTTACGGACAGAGACACGGGTATGATGAATGCTCTGGCAGGAATATTTCCAACATCTGCAAACTTGTTGTGCCAATTTCACATTAAGAAAAATGTGAGGGCCAAAGCAAGGCTCATTGTGAAAGACCAATCTGTTGTTAATGACATTATGGGTGCATTTCAATCTGTTGTGCATGCGAAGACCACAGAAGAGTATGATTATGAGTTGGGTCTGTTTAACGACTTGGCAGGACCTTATCCCAGTTTCATAGAGTATGTCAGGACCACCTGGCTAGACCCCTTCAAGGAAAAATTCATTGATGCATGGATAAATAACCATATGCACCTTGGCAACACTACCACCAACAGAGTTGAGTCTGCACACTCTCACTTGAAGCAAATATTACGAGACAGTAGGGGAGATTTGTGTAAGTGCTGGGATGGAATGCAGATCATGCTTAGGATACAACATTCTGACCTTAAAATGCACTTCGAGCATAGTTTGAGTAGAGTGAAAGTACACCACTTGAAGAAGAAGATTTTTGATGAAATTAAGGGTTTAGTTTCATCTAATGCTATAGACCATATTTTGGATGAGATGCAACACACTGGATCCGTTTCACTTAACCCATCATTATGTCAACACACGCTCCGGTTCCACTCCTACTTTGTCAACGTGTCCAGCACCTAATCCATCAGAAAGCAAAAAGAGAACTCAAGCTGACAGTGCTACTACAATCCCTACTCCTCCACTACATAAGAAACCAACACCCACACCTATTGTTACAGAAGCTGCTGCTACTACTGTTTCAACAGCTCTTATTTTGACACCAACACTTACTTTGACACCAGCTCCTCATCCAAAACCCACACCTATGGATGCTGCACACATTGATGTTTTTAATACTTACATAATAGGGATGCCAGAATACATGCGTTCCTATGTTCAAAAAATTGTTAATGTGGTAGGTGATGGAAATTGTGGCTTCCGATGTATTGCTGCATTTCTTGGTAGGGGTGAGGAGGCTTGGCAGTCAGTCAGAACTGATCTGATGGAGGAGCTTAACCAATACAATGACTTCTACACTAGACTGTATGGTGGTATTGGTAAGGTCACATTTTTGATGAGGGCATTGTTGAGGGCACATCATGGACATAATGTTGAAGATAATTGGATGACTACACCAGATATGAGGTATCTAATCAGTAACAAGTACAAAGTCGTCCTGACTTGTTGGTCACCTAATTGTTGTTACACAATTTTTCCATTCAATGTTGCACCATTCAGAACTGCCCGACAGTTCAACATCCTTTTGGTACCAGAACACAAACACTTTGTACAGGTAAACTGTCTTCTATTTAGATTCAATGTAGTAATTCCAAAACATTACATAACATTCTGTTTTTTGTTGTCTTTTTGAAGGTCTTTATGAAGCCTGGAAGTCCAATGCCCTTGCCGGATTTGATATGGAATACTAATAGGGCACCCATAGCAAAGGGTTGGGACTCGCTTTTTGTTGGCCGGATACAAAAGTGGAAGAATTTGCTCATACAATCACAACCCCCCCATCCCCTTCCTTGTGTAGATTTAAGTAAAGATAGTGATGGTAGTCAATGTTAAGTTAGGTTTATAATTTTGGTACACAATGTTGTATAACTTTGGTACACAATGTTGTATAATTTTGGTACATAATGTTAAAGTTATGTTTATATTTTGAAATCACCAAAACTGTGTGCTGATTTATTTAGTTTCTGTTTCTACATAACAGTGGTTCGCATGTGGCCATTCGAACGCCTGTTCGAACGCACCCATTTGAACACGTTCGAATAAAGCCATTCGAGGCAGCCAAAACACACCCTCACACCATCAGTTAACAATATTCCTTAACACGGATGACATTATTCGAACAGGTTCGAACGATGTCATGCGAACAATACCAATTCCTTAACACGCACAACGTCGTTCGAACTGGTTCGCATAACCTCGTTCGAACAGTCACTTAACCCGTGTTACACGAGCGTCTCACGCGAGGTCATTTTGGAGAAAAATAAGTTGAGGGGTGTGCGAGGAGTAGGAGGGGGTGTGGGGAAAGCAATAGCCTTTTAGATTGACATATAAGCCTATTTCATACCTGAGGCGCACACGACGTTACTGACTGGTTCCCTCACTCACACATCGCAATCACAATTCACAAGTAGCAACTACACTACAGGAAGGAATCGTTGCCTTCATTCATTTTATTTCACCCAATCCATCCATCAATTCATAATCATAATG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02536.17	mTERF	80	283	5.70E-33
PF02536.17	mTERF	246	339	5.70E-33

Gene family

Gene family	Subfamily
Transcription Factors Family	mTERF

Gene Ontology

GO term	Description	Category
GO:0006353	DNA-templated transcription termination	Biological Process
GO:0003690	double-stranded DNA binding	Molecular Function
GO:0043231	intracellular membrane-bounded organelle	Cellular Component
GO:0005737	cytoplasm	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR003690	Transcription termination factor, mitochondrial/chloroplastic
IPR038538	MTERF superfamily, mitochondrial/chloroplastic

trEMBL

trEMBL term	Description
A0A1S2Z822	_

SwissProt

SwissProt term	Description
--	--

KEGG

KO	Description	Enzyme
K15031	mitochondrial transcription termination factor family protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G07900	Mitochondrial transcription termination factor family protein
Medicago sativa L.	MsG0280008013.01.T01	_
Oryza sativa L.	LOC_Os05g33440.1	mTERF domain containing protein, expressed
Cucumis sativus L.	Csa006028	_
Glycyrrhiza uralensis Fisch.	Glyur000152s00012694.1	_
Codonopsis lanceolata	Cl_chr01_57570T	_
Arachis hypogaea L.	AH01G27350.1	Cullin-1 like

Expression pattern