Gene detail

Detail information of Am06G012490.1 Annotation

Gene ID	Annotation
Am06G012490.1	Mitochondrial transcription termination factor family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G012490.1	mRNA	Chr06	37892941	37894203	+

Sequences

CDS:

>Am06G012490.1
ATGTTCAATACCTACCGTAGCAAAGCCTTTCTCTACCTCAAGGCCATAACTTTCCCACCATTCCCAAACCCTTACCCTCTTTTCCATCACTACCCTTCTCTCCATTTCTGCACCAACATTTCCGATTATTCACCCTCATTTCCAGTGTCCTACCTCCTCAGCAATTTTGGCTTCTCCCCAAAATCTGCTTCCAAACTCTGCTCCACATACCATCTTCGATTCAAGACATCCGAAAACCCCGATTCAGTTCTCACCTTCTTTAGAAACCGCGGTTTCTCGGACACCCAATTACACCATATGATTGAAAAGGCACCATGGCTACTTTCCTGCGACCCCTCCAAAAGGGTCTTGCCAAAGTTTCAATTTTTTGCTTCCAAAGGTGCTTCCACCTCTGACCTTATTAGCCTTGTCAGCAAATACCCCTATGTATTGTCTCCAAGCCTGGAAAATAAAATAGTCCCAACCTATGAATTGGTTTATAAATTCTTGAAATCTGACAAGGACACTATTGCTTTCTTAAATTACAATGCAACTTTATTTACCGATAGTTATCTGGATCGTAACATAAGAGTGTTGATTGAGAATGGAGTGACTGAATCAAACATTGCTAAACTGTTTCGGTTCTGGCCTAGGGTCTTCGGCAGAAGTGACAAAAAAATGCTGAAGCTGGTGATAGAAGTAAAGGAGATGGGGTTTCCTCCTTCAAAATCAGCTTTTCCTATAGCATTGATAGCCAAAGCATTTTTAACCAAAACCCGTTGGAATGAGAAAGTTGATGTCTTTAAGAAATGGGGGTGGTCTGATGCAGATATTCTGCTATCATTTAGAATGGAGCCTCGATGTATGATAACATCCATTGATAAAATAAATTTAGTGATGAGCTTTTGGGTCAATCAATTGGGTTGGGATGCTTTGGCCCTTGTTAAAGCACCAGCAGTTATTAGGCTGAGTTTGGAGAGAAGGATCATACCTAGGGCCTCAGTTGTTCAATATCTATTGGAGAAAGGTTTGCGAAAAAAGAATGCAAGCTTAACTACTCCATTTATAATGAATGAGAAGTTGTTCGTGGACAAGTTTATAAAACATTTTATGGAGGATTCTTCTTATCTATTAAATCTGTATGAGGAAAAACTGAAAGTTGTATCCATCAGAGACAAAACTGGCATGTCTTGA

Protein:

Promoter(3k):

>AM06G012490.1
CACCCACACCCACCTCATTGAGATCCTCATTTAAATGTTGCACATACCATATTAGTTTACCAAGTGTACCTGTTACTTACCGGGTACAGAAATTACCATATTTGAGAAATGTATAAAATAACAAAAAATAATCTTAATATGTGTTCCAACTCAACAAATGCCAAAAAAAGTTGTAGACATCTGTACCCATGAATATGATCTTAAAACTTCACCATATCAGATGCTGCTTTCTTCACCCCATTACCAACATATTCAACAATTTGAGATAGACAATCTGCATTAACTAATTTCCATTATAAATTATTCAATGACATGTCTTTGTACTTTTATCATTTAGTTATATATTTAGTTTTTTTGCACATATTATTTTGCCTTTTTTATATAGTATGATTACTATAAACATGATTGTTGTTTCCATACTCCCACTACTTCTCAAGGACGCATACTTCATCCTAATAGATACGATATTTAAAATCCTTCATCGAAACATGTGCTTTATTTCAAATCTTTTCATCGAAACATCATTTTTGCATACAACATTTACGCAGTTAAATGATGCCTACGACATGCCCCTAAGTTAGATACTATTCCAAACCATCATTACAATTTTGTTTTTTATACAACCCAATAAAGGCCCAACAGGTTGTACCCTTAAGAAACTCTCGACAAGATATCAAAATATTACCAAATTTAAAAAACATACATTTAACTACTTTAATTCTTTTATGATTCATATGAAATAAGGACAAAGTAACCAACATAAATATTTACCCACCGAGGCAACCATTTGTAAGCCCTTTAATCGTATATCATTAAGTAAAGAGCCACCAATGTTTGTCATAATTTCGTCATTACATGCGTCGTTATCACATTGATTCACCATTATAAAGGCAAACACACTCCGTGCAGCGCACTGGTAATCGCACTATTAGTAGTAAATAGGCACCAATTTCAACATTTTCTTCTCACTGACCGAGGTGCGTATGCCTCTACCTGCCGGATAATGATTCTCTGTAGTCACCTCTCTCTATCTCTCTCCTCTTGTACTTTTTAAAATTTTTTAAAACAAAATAATTTTAAGAGTTAGGATCGAAGATTTTATTGATCAAATGGTTCTTGTAAGGCTTGACTTTAGTGACTGCAGTCAATAATGGCTGCAGTGAATCATCATCCCTACCTGCGACCATTTTATTAATTTTTAAACTTTTCATTTATTTTATTATTATTTTAAAAACCTTTTTAAACTTTTAGTCTTCTTCATCATCTCACTCACCATTGTTATTCTTACGGTTGTCTTCTTCTTCTCATAGACATTTATCTTTTTGGTTGCCCAACTCGTTAAAATCGACCCATGTACAGTGGCGGATCCAGAAAATTTCATTCATGGGGGCAAGAAAATAAATTATCTATAAATTGCATAGAATAAAAATAAGATAAGTTTTTACAAAATATATAATCACATGTGTGACCAAACAACACCAAAAAAGATATCCAAACTTCCACAAATTACAGTTGTCCTCTACGCGTTTTCATATTCTGAAAATGTTGGATGATAATTTCATTGTCAATACTATCAAAAATATCTGCCTCAATATATGTTACAAGACAATCATTCAACAGTTCATCTCCCATACGATTGCGCAGTTCATTCTTCACATAATTCATTGCAGAGAAACTTCTTTCAACCGTTGCAGTTGCCACTGGCAAAATCAAAGCTAGCTTCAAAAGTAAATAGACCATTGGATACACAATATGTTTTCCTGTTCTCACCAACATTTCAGAAAGACTAGTGATCCCGTTTAGCTTTGAAAATTGATCATCAGACCGAACATCTATGATTAAATTATCAAGTGCATCATCCAACCCCATAAGCTCAACAGAAGAAAATTCGGATGGATAAAACTTAGCCAAACGAATCAATTTCTCCTTATCAAATGCAAAAAATGAATCTCTTGGATTTAAGCTTGCTACACAAAGAAGCAACTCGGTGTTCACCTCGTTAAATCTATTACTAAGCTCTTGAAGTTGTCTATCAATCACTTGATAAAATAACTCAACTAGATAGTGATGGAGATTTGAAATCTTTTGAACTCTACGCTTTGATCTTCCTTGTGTATCAAGTGCATCATCCATATTTGGAATTCTAATATTTTTCTTCTCACAAAACATTGATACTTCATTTAATAATGCATGACAGTCATCATCTCTCATGCTTTGCAACCTTTCCCTGCAAATTCTAACTAATGCTATAGCATTTACAATGACAGAGGAAGAGAACGTGGGAATAAAATATTAGGGTAGAATATGTGTGGGCTTTGAACCAAATATATTTGGGCCTTGTATATTGGGGTCAAACATATTATTTTATTGGGGGCAAAATCAGTTTTATTGGGTAATTAGAAAATAAATTTATTTTTTTGGTGGGGTCAATTGCCCCCACTCTCCTCTACATACATCCGCCTCTGCCCGTGTAGCCCGCGTAACTAAAAACCGAACCCGCTGCAACCGAAATTTAAAAATGGGTGGATTTGGGCCAATATGTAGCAACAGCGGTTTGGGCTGGATGGCCATTTTGGGCCCGTAACCGCCCATACCCGGCCTATGTATAATGTCCCATGGGGGTTATGAAAAAAAAAAACCACCAACAAAGGGTACAAGCGAGCGTAATTCCTGTCACGTTTCTGCTCCATCGAATTCTTCTTCAACGACCAACCATGACGGCCACTCATTGTCGCCAGTTCAGTAATTAGAAGCCGAGCCAAACACTGCAACAGTCGCCGTTGAGCCCTCTCTTACCTTACGAGTGGGCTCATTATTATAGATAGTGAAAATTTGCAATGCCCATCCAAGACCACCATACATAGGTTTCAGGTATTTTCGTTTTGTTTTATCATTCATCTTTATTAACTTCAATGCTTCAAATTTGAACCCTTTTCTTCAAATTCATCGCCATTTTTTCTTAACTTTTTCCCCAAAACAAAATTCTCCATCGCTTTCATC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02536.17	mTERF	84	171	1.00E-33
PF02536.17	mTERF	182	355	1.00E-33

Gene family

Gene family	Subfamily
Transcription Factors Family	mTERF

Gene Ontology

GO term	Description	Category
GO:0003690	double-stranded DNA binding	Molecular Function
GO:0043231	intracellular membrane-bounded organelle	Cellular Component
GO:0005737	cytoplasm	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0016020	membrane	Cellular Component

InterPro

InterPro term	Description
IPR003690	Transcription termination factor, mitochondrial/chloroplastic
IPR038538	MTERF superfamily, mitochondrial/chloroplastic

trEMBL

trEMBL term	Description
A0A3Q7XVY8	_

SwissProt

SwissProt term	Description
MTEF6_ARATH	Transcription termination factor MTERF6, chloroplastic/mitochondrial

KEGG

KO	Description	Enzyme
K15031	mitochondrial transcription termination factor family protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G07900	Mitochondrial transcription termination factor family protein
Medicago sativa L.	MsG0280008013.01.T01	_
Oryza sativa L.	LOC_Os05g33440.1	mTERF domain containing protein, expressed
Cucumis sativus L.	Csa006028	_
Glycyrrhiza uralensis Fisch.	Glyur000152s00012694.1	_
Codonopsis lanceolata	Cl_chr01_57670T	_
Arachis hypogaea L.	AH14G12840.1	Uncharacterized protein like

Expression pattern