Gene detail

Detail information of Am06G011970.1 Annotation

Gene ID	Annotation
Am06G011970.1	TOXICOS EN LEVADURA 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G011970.1	mRNA	Chr06	36089927	36091507	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM06G011970.1
CGTGTTACTGGCGGATGTCATTACTGGCCATTTTTAATGGTCAACGCACAGCTTTTGAGGGTATGTTACTGGCTGAAATTTCCGCCAGTAAATGCATTTACTGACGGATATGTTACTGGCGGAAATTTCCTGTTACTGGCTGAACTGCGTTACTGGCGGAACTGCATTACTGGCCATTTTTGACAGTCAATGCGCAGCTTTTGAGGGTATTTTCTGACTGAAATTTCCGCCAGTAAATGCAATTACTGGCGGATATAATTATTTATAAAATTATTTTAGTTTTTCAATTAATTTCCGCCAGAAATTCCTACTCAATCCGCCAGTAAATATACTGGCTGTTTAAATTCGACAGAAATGTTATGGAATCCGCCAGAAACTTACTGGAAGACTAAATCCGCCAGAAATCGCATAATTCCACCAGAAAACTTACTGGCTGACTGATTCCGCCAGAAATGTCTAGCCAGTAATGCAAGTAATTCTTGTAGTGAAAGACGCTGATATCTCTCACCGAAATTCGAAGGAGCCTTGGTTTGAAGATGAAATTCCTCAGCAATACAAGCAAGAGTTTTCTTATAATCTCTGCACCGTCTTTTTTTCACATACATGGGAGGGATGCAATGACAGAAAGGATTACCCCACGCAGCGAAATCATCCAAAACTCCCAGTGTGTGCCGACAAATTAACCCCCAGTTCTCAAAAAACCGACAGCTGCAAGTAACAGAACTCCTGACCAAATCTAGCTTCACAACTTCGGTCTCTACCAAAACTTGGTTCGCAGTAAATTGATTATCCCATCTCTCAACATTTATAACTTCAGTTGTGTCCTGTTTCAACTCGTGAACAGGCTGCACACGAAATATACTATTAGGAAAAATAATAGTTATTGAGGAGTAATATTGTTAGTAACAAGTAATAGTAACCACAAATATGTATTCTGTGGTTGTTGTCCAGTAACCACAGAATGCATATTTGTGGTTACTGGAATCCAACTAGTGTTTCTACGCAAACATTATAAAGGAAACGAAGAAATGAATCAGGTAAGCATAGGACAATTATGGTTAAACATATTTTAAAAGCTTAAAATCAAAGAATTTGACAATTATAAGTTAAGAACCTGAAACAGCCATCTCAGTGAGATTTTCATCCAGACCAGGACAACCCTGAACTGTAATAGAGAAATCCAAAACCACAACGTGAATTAATTGTGAAATGTGAAGTAAGGTAGTAAAACACGGCACATGAATTATATCAGACAAAGAAACAAGTGACTTACGAGCAAGTAAATGTGTAAAGCTGGTTGCTTTAGCAAGTTCATCAACTCCAAGCATTTTAAAATTTGCAGAAAAATGACTTAAAGGAATTTACCAATGTGCAAATCACTAATACCAAACAACATCATAAAAGTTAAGAGAAAATTATTTTATCTAAAAATAAACTTGAAAGAAATGGCAATTCAATGTGAAACAAGAACATAATCAAACTAGAAACACTAGTTGGATTCCAGTAACCACAAATATGCATTATGTGGTTACTTTCCAGTAACCACAGAATGCATATTTGTGGTTATTGGAACAGAAATTTTAAAAGCTCATATAACTGTAATATATTGCAGCAACAAATGCCTGAAAATCAGATCAAAAGCATTTAGCAACAACTGATGTTAGTACACATTTCACGTATGAAGAGTTAATGACAAAGTACTTTATTGATCACTACCAAACAACTAAAATAGAATCATCCATAGATTATGTACTCAATTTTCAGGTGGCACAAAGCACCACTAACACTTTATCAGAAATAAAGAGGGGACAAACATCAACAAATGTAAAACTCTAAAAGCTCATATAACTCTAAAGGAATTTACCAATGTGCAAATCACTAATACCAAACAACATCATAAAAGTTAAGAGAAAATTAATTTATCTAAAAATAAACTTGAAAGAAATGGCAATTCAATGTGAAACAAGAACATAATCAAATTAGAAACACTAGTTGGATTCTAGTAACCACAAATATGCATTCAGTGGTTACTGTCCAGTAACCGCAGAATGCATATTTGTGGTTATAGTTTCTGATAAATTATAGTTATGGTGTTTTGGTTTAGGCATTTTATCGAACAGGTGAGTGAAGAGATTTACTTACAGTGAGTTTACTGCGGAGACCACGTTCGATGGTGTCCAGAATTAGTACAGATCTAATGCACAAATTGAATTAGAATCAATCATCAATGGACAAGGTTAGATTACCAGGTAACAAGACGAGCTGCATTATGCCAAACAAAGAGAATAAGCATAAGGGCAATGAGGATGTGACATAGTAGAGTAACAAGATTATATTCAGCCACTTCAAAGAGAAACCAAACCATGGAGAAACCAGCTACAACTACTGTCGATACTATCAGTTGACGTGGTGCGGCGTGGTGGTTTGCCGTTGCAAGGATGGTGTGCAACGGAGAGAGGAAGAAGACGTTATGCTACTGTGCAGGGATGGAGGAATGGGTGTGTAAAATTACCTAGATATCCTCCTAAATTGATAGCCATTGAATCTTATTTAACTAAAATAATACAGATCTAATGGCTGAGACTAATTTAGTAATAAAAACTAAGGAAATCCTTAGTTACCTAAATCAGTCTCGTAAATTTCAGTTTCCATTAATTAAAATATTAAAGAAACCGCGTGAAGACTAAAAAGTGGCGTCTGTTTGTTGTTCTATTGACAATGACAACAACTATAACAGGGGAACGGGTGACTAAACTAAACAAAGCATTCCGCATGATCCAGTCCATAACGTAACCAACCATACCGCTCTCCTTTCTACTCTAATCTACTGACTACTGTCAACCCATCAAAGACTCAAGAACCTTCCTCACTCTTTCCATAAACCTATATCATCCATCCTTACTTACTTTTTAACCAACCAACCCTTTCTTCTTCGCTCATCATATTATTCTCCTCTCTTACTTATACACCTCCCTCACTCTCACTCCCGCAGCAACGCAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF13639.9	zf-RING_2	122	165	3.20E-13
PF17123.8	zf-RING_11	122	151	5.30E-11
PF12678.10	zf-rbx1	119	165	4.30E-09
PF13923.9	zf-C3HC4_2	122	164	1.30E-07
PF00097.28	zf-C3HC4	123	164	1.90E-06

Gene family

Gene family	Subfamily
Ubiquitin Family	RING

Gene Ontology

GO term	Description	Category
GO:0016567	protein ubiquitination	Biological Process
GO:0016020	membrane	Cellular Component
GO:0016740	transferase activity	Molecular Function
GO:0140096	catalytic activity, acting on a protein	Molecular Function
GO:0006952	defense response	Biological Process

InterPro

InterPro term	Description
IPR001841	Zinc finger, RING-type
IPR013083	Zinc finger, RING/FYVE/PHD-type

trEMBL

trEMBL term	Description
A0AAN9LA04	_

SwissProt

SwissProt term	Description
ATL2_ARATH	RING-H2 finger protein ATL2

KEGG

KO	Description	Enzyme
K19038	E3 ubiquitin-protein ligase ATL41	[EC: 2.3.2.27]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G16720	TOXICOS EN LEVADURA 2
Medicago sativa L.	MsG0280007950.01.T01	_
Oryza sativa L.	LOC_Os01g11520.1	RING-H2 finger protein, putative, expressed
Cucumis sativus L.	Csa021447	_
Glycyrrhiza uralensis Fisch.	Glyur001223s00024747.1	_
Codonopsis lanceolata	Cl_chr01_06840T	_
Arachis hypogaea L.	AH14G11950.1	RING-H2 finger protein ATL2 like

Expression pattern