| Gene ID | Annotation |
|---|---|
| Am06G011900.1 | Pectin lyase-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G011900.1 | mRNA | Chr06 | 35816735 | 35820674 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00295.20 | Glyco_hydro_28 | 70 | 397 | 3.30E-90 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH28 |
| GO term | Description | Category |
|---|---|---|
| GO:0004650 | polygalacturonase activity | Molecular Function |
| GO:0005975 | carbohydrate metabolic process | Biological Process |
| GO:0047911 | galacturan 1,4-alpha-galacturonidase activity | Molecular Function |
| GO:0016829 | lyase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011050 | Pectin lyase fold/virulence factor |
| IPR012334 | Pectin lyase fold |
| IPR000743 | Glycoside hydrolase, family 28 |
| trEMBL term | Description |
|---|---|
| A0A8B8K3I8 | _ |
| SwissProt term | Description |
|---|---|
| PGLR_GOSHI | Polygalacturonase |
| KO | Description | Enzyme |
|---|---|---|
| K01213 | galacturan 1,4-alpha-galacturonidase | [EC: 3.2.1.67] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G18180 | Pectin lyase-like superfamily protein |
| Medicago sativa L. | MsG0280007943.01.T01 | _ |
| Oryza sativa L. | LOC_Os06g40880.1 | polygalacturonase, putative, expressed |
| Cucumis sativus L. | Csa013524 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000555s00023334.1 | _ |
| Codonopsis lanceolata | Cl_chr01_06580T | _ |
| Arachis hypogaea L. | AH04G07020.1 | Polygalacturonase like |