Gene detail

Detail information of Am06G011440.1 Annotation

Gene ID	Annotation
Am06G011440.1	calmodulin binding;transcription regulators

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G011440.1	mRNA	Chr06	33585574	33592523	-

Sequences

CDS:

>Am06G011440.1
ATGGCACAAAATTTTACAGGGCAACTTGTAGGTTCAGAAATACATGGGTTCCACACGTTGCAGGACCTGGATGTCGAGAATACCATGGAGGAAGCAAGAAGCAGATGGCTTCGTCCCAATGAGATTCATGCCATACTCAGCAATCACAAATATTTTACGATCCTTGTCAAGCCATTGCGTTTGCCGAAAAGTGGTACTCTTGTACTATTTGACCGCAAGATGCTTAGGAATTTTCGAAAAGATGGGCACAACTGGAAAAAGAAAAATGATGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAGGTTGGTAATGAAGAAAGGATCCACGTATATTATGCACACGGCCAAGATAACCCAAGCTTTGTTCGAAGATGTTATTGGTTGCTTGATAAGAGTCTGGAGCACATAGTCCTTGTTCATTATCGTGAAACACAGGAGTCTCAGGGTTCTCCTGCTACACCTGTAAATTCAAATACGAATTTTGTCTCTAATCCAAGTCCAACTCCAACTCCAACTCCATCGTGGATTCTATCAGAAGACTTTGATTCTGGGACCAACAGTGTCTATAGTGATGGGCTCACTGAAAATTTAACAGTCAAAAGTCATGAACAGAGGCTTCATGAGATTAATACCCTTGAATGGGATGACCTATTGAATCCAAATGCTAATACCACTACTAAACCTAATGGAGGCAATGAACAATTTTTGTATCAACAAAATCAAAGCTTACTAAATGGCAGCTTTGGCAATGTTGCAAGTAACCCTTCTGCAGAAATTCCCTCGTTTGGTAATTTAGCTCCGCCAATTTCTGGGAACAGTAGTGTTCCTTACAGTTTTCAAGAAAGTGTTAACCTTCAGAAGAATCATCCTATCTCTTATGGTGGTGTTGATTCCATGGACAATTTAGTCAATGGAGGATTGCAAAGTCAGAACAGCTTTGGAACATGGATAAACAACGTCATATCCGATACACCACCATGTTCTTTAGAGGCATCAACTCCTGAATCATCTATTCGTTCGTCTGTTTATGAGCCATTTTCATCACTGGAGATGGATACTCAGCAATCTTCTCTTCCAGAACAAGTATTTAATCTCACTGAGGTGTCCCCTTCATGGGCATCTTCCACTGAGAAAACAAAGGTTCTGGTAACCGGCTACTTTCACAGTGATTATCAACATCTTGCGAAGTCGAAATTAGTGTGTTTCTGTGGTGATGTAAGTGTTCCTGTAGAAATTGTTCAGGCTGGAGTTTATCGATGCTGGGTATCACCACATTCTCCTGGATTTGTAAATCTCTATATGAGCTTTGATGGTCATAAGCCTATTAGCCAAGTTGTTAACTTCGAGTTTCGCACTCCTTTCTTGCACGATCCTGCTGCTTCAATGGAAGAAAGATACAACTGGAATGCGTTTCGACTTCAAATGAGGCTCTCTCATTTGCTTTTTACGACACAAAAGACCCTTGATGTTTTCTCTACTAAAGTGTCACCTGATGCACTGAAAGAGGCCCAAAAATTTTCCTTGAAAACATCATTTATTTCCAAAACTTGGCAACACTTGATGAAGTCAACTGATGGTAATACAACTCCATTTCCACAAGCAAAAGATACCTTGTTTGAAATTGCATTGAAAACCAAACTAAAGGAATGGCTTTTGGAACGAATCGTCTTGGGATGTAAGACCACTGAGTATGATGCACTAGGCCAAGGTGTAATTCACTTGTGTACAATTTTAGGATATACTTGGGCTATTTCCTTATATTCATGGTCTGGATTGTCGATGGATTTCCGTGACAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATAATGGAATGGAGAAAATGGTTGCAACTCTGTTGTCTTGTGGGGCAAGGCCCAACTTGGTCACAGATCCAACTCCACAAAATCCCGGTGGATGTACAGCTGCCGATCTTGCTTATAAGAAGGGATATGATGGTTTAGCAGCTTATCTTTCAGAAAAGTGTCTGGTTGAGCAGTTCAATGATATGAGCTTAGCTGGAAATATCAGTGGTAAACTGGAAACCACTACAACTGATCCGGTAAATTCTGATAACCTTACCGAGGACCAGGTGTACCTAAAGGATACATTGGCAGCTTACCGAACAGCTGCTGAGGCTGCAGCACGCATACAATCTGCATTTAGGGATCATGCATACAAGTTGCGATCTAACGCAGTTCAATTTAGCAGCCCAGAGGATGAAGCACGCCATATTGTTGCAGCAATGAAGATTCAACATGCCTTTCGCAAATTTGAGACAAGGAAAATGATGACAGCTGCTGCTCGGATCCAGCATACATACCGTACATGGAAGTTCCGTAGAGATTTTCTCCACATGCGACGTCAGGCTATTAAAATTCAAGCTGCATTCAGAGGATTTCAAGTGCGTAGGCAATACAGTAAAATCATATGGTCTGTTGGGGTTCTTGAGAAAGCAATCCTACGTTGGCGTTTAAAGAGAAAAGGTTTTCGCGGGCTTCAGGTGAGTCCTGATGAAGACATGAAAGAGAAGCAGGAAAGTGATGTAGAGGAGGACTTCTTTAAGGCTGGTCGGAAACAAGCCGAAGAACGCGTTGAGCGGTCCGTGGTGCGTGTACAAGCCATGTTCCGTTCTAAGAAAGCACAACAGGAGTATAGCAGAATGAAGATGGCTCATAGTCAAGCAAAGCTGGAACTTGAATTAGAAGAACTCATCAACTATGAGGGTGACATGTTAACAACCAAGAAATGA

Protein:

Promoter(3k):

>AM06G011440.1
GAGTGAGGGGAAAGGTTCGGCACTTTATCTCCTCTGGAACGTTACGGTATTGCATAACCGTGTTAAAGTAGTCGAGGTGGCGATCAGGATCGCCAGTCCCATCATGCATTTTCAAACCCACAGGTGGTTTCTCGAGGTGTTTTGGCACCGGGAAGTAGTCGATCTTACTTGTGAAAGGTCATTTATGCTTTGCCGACCTCTCAAGGGGTGGAGACCGTCGGTAGCCACACTTGCCGGGGGATCCCCGCAAGCGAAGGCATTGACATTCCTGCCTCGGAGACCTTTTCTGACTTTTGGTACATCGCCTCGGAGGAGAGAGAAACAGAAACGAGCTAGGCCGAGGGGAACCCTCAGGACCATAAGAATCATCAGGGGTCCGACTTGGTGGAGTGCGGTGATGGTATCTCCTCCAAGCCAGAGATCGGCGGCGGCCGCGGCCATGAGTCATTCCACTTAAAGAGTTGCACAAAGAGGAACTCCGATCCGGAATGTTACGAGCCCGGATCTCAACGATCTGAGCTTCTAACTGGGTGTAGCGTTGGCTTTCCTGCCGGTCGGCCTCAGTTTGCCGATTTAGGAACAGGACGAGCTGTTGAACAGCATCGACCGGTACCTGGACGGTCGGAGGGGGAGGTGGAAGTCGGTTCCGGGCTGAGCTCCCAGGAACCATAGCCATAGCCGAGCTTTGAGCAAGCGCCGGGCTAAGGGGTAAGGTGACTGCCACTCCTTCCGGAGTCACCCGCTGCAGAATCGGTCCTTCAGCGACATTCGGGATAGTCCTACGACGTAAGGTCAGAGTCTTTGTCAATCAAGGAGATGGGAGAGGAACTAGAGTACAAGATCCTCCCACTGTGGTCGCCAATATTCTGTACCGTACCTCTGGACCAGTATCCGATCTTAGACACAAGGTTCGAGATAGTTGGTAGGGGTTAGTCTTGATCAACCGAGCTCCGCTTCCGATCCGGGGCAGGTGGTACCTGCAGGGACACTCCGACGCTGAAGTCAGCTAGAGAACTGATTAGAGGTAAAGAGTATGAAAGAGTGTGTACCTTGAGCATTACATTGAATGCCTATTTATAGAGTAAAAGTGTGTTGTCCTAATGGATCAGAGCCGTCCGATCTAGGGCCTAGATCTTAGCCGTTGGTTAATGGATCTGTTTTTGCTTATGGGCCTCACTATTGTGGATTGGGTCAATCCGTAACAAGTCTCTTAACCATTTGGTCTTGAGTTCGATCTCTGGCAGGTGCGTATGGAAAAATATTTTTGGGGGAGGTCAACCCCTTAAATGGATCTCAGATATCTCAAAGGATTAGTCTCCACATTCGCCGTGGAGGATACATTGGTTTACCGAATAATAGCGATAAGTATAATAGATGTAGTTAACATTTGTTTATATTTTAGATTACCAAACATTATTTTCTATTGCTTATATTTGAGACCGGAGAAAGTGTACAATTTAAAAAAAAATTGATCATTTATTAAATGAGTAATTCTTTATAATATAGTACGAAAAACATGATATGGTGTTCTTTCCATAGTAATGCTCCGTGTTTTGTTATTTGTAGCACCTTAAGAGTATATTTCTTATATTTCTTGTTTTTCGTACTTTATATCATCGCTCTAAATATAGCAAATTTTCATAACATTCATTTTTGTACATACAATTGTTCATAATAAAAAACAATATAACTGAAGAAAAATTATCAAAAAGTTTATTGAAAATGAAACACAATCAAAATCAAATTAAGATAAATTAATTTTGTTAAAACAGCCAAAAATATGGAATGAAGAAAGTAGATATTGTACATATTAATCTCATAGCATACCTCAAACCGATGGCTAATTTGGGTGGGTTAAAAAACAAAGTTCAATAATTTTGTGAAAAGAAAAAACAAAGTGCAATAATAGAAATCGTGCTCCCGAGTTCGATTCCCACAATGGACAAATTCGGTGTTTGTCAGTGCGAAATTTGATTCTAGCACGAGTGGAGATTAGTTTTTCGTTGAAAGCGTCGGAACACTCCGTGAGTCAGTGTTTTAAAACTCGAACTGGTGGCCGACTCGGTGAAGGTACCGGGTCACTGGGTCAAGGGTCGGACCGAAGGGTCGACAGTTGAACCGCATGACCAAAACCGGGACCGAATGACTCGGACCCGGTCTCTATTTCGCGAATTTTCAATACCTATATAGTATATAATATAAATTTCATACCTGTAAAATTAATAACTGTGTTTATTTTATATCTACTAAAATATAAAAATTAATATCTTAATTTATTAATATTTTAAAATTTATTCATACATAATATTAATCTATTTTAGATCACACAAATTAATATGTACTCAACAAATATGGTGCTTGTATTTGCTAATAATGCAATAATGGAAAAAAAAGATGAAAAAGAGCAAAAAAAATAGATTAAACGACGTGGTTTTGATAATAAAAAAAACACAACCCGATCCGGGTCAACCCGGGTCACCGGTTCACCGGTTTTCTCAAAAATCGGCCGAGTCACACCGATTTTCACCAGTTGACTGCATTTCTGATCCACCAAGCTGACCGGCTCGGTTACCTCCCCCCGGGTTCCCGGTTCGACCGGCCGGGCCGAGCCGGTTTTTGAAACTATGCCGTGAGTAACCGGGTTGAGAAAAAGAAATTACACACTTTGGAAAAAGCAAAATAGGAAAATGGAAAAAGGTAAGAGAAGAGAACAGAGTGTCATTATTCAGTTCCGACTACCCTTTCTCTTTCTTCCCCCTTCCAACATACCCATCTCCCCAATCAGGTAAATTTCTCACCTTTTCTGCTTTTTCTTCCACCCTTTTGATTTCTTTGTTCCCTCCTTATTTTTCTTTTTCACACATATTAATTGGATATTGACTGTTCTCTTTTGTTTAATTGTGTTTTGCTGACTTTTTTGTTTACTTTAATGTTGTAGATTATACAGTTGTTGGTTTGTGGTGAGAGAAGAAGGATTTCTCCTCATAGTTTTCTTCTATA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03859.19	CG-1	31	144	3.00E-45

Gene family

Gene family	Subfamily
Transcription Factors Family	Others

Gene Ontology

GO term	Description	Category
GO:0003690	double-stranded DNA binding	Molecular Function
GO:0005737	cytoplasm	Cellular Component
GO:0043565	sequence-specific DNA binding	Molecular Function
GO:0016787	hydrolase activity	Molecular Function
GO:1902680	positive regulation of RNA biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR000048	IQ motif, EF-hand binding site
IPR013783	Immunoglobulin-like fold
IPR014756	Immunoglobulin E-set
IPR005559	CG-1 DNA-binding domain
IPR036770	Ankyrin repeat-containing domain superfamily
IPR002110	Ankyrin repeat

trEMBL

trEMBL term	Description
A0A396JD54	_

SwissProt

SwissProt term	Description
CMTA5_ARATH	Calmodulin-binding transcription activator 5

KEGG

KO	Description	Enzyme
K21596	calmodulin-binding transcription activator

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G16940	calmodulin binding;transcription regulators
Medicago sativa L.	MsG0280007877.01.T01	_
Oryza sativa L.	LOC_Os07g30774.1	calmodulin-binding transcription activator 5, putative, expressed
Cucumis sativus L.	Csa022708	_
Glycyrrhiza uralensis Fisch.	Glyur000161s00011256.2	_
Codonopsis lanceolata	Cl_chr01_53280T	_
Arachis hypogaea L.	AH14G10980.1	Calmodulin-binding transcription activator 5 like

Expression pattern