| Gene ID | Annotation |
|---|---|
| Am06G010050.1 | dicer-like 2 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G010050.1 | mRNA | Chr06 | 26706732 | 26718776 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00636.29 | Ribonuclease_3 | 983 | 1098 | 6.90E-47 |
| PF00636.29 | Ribonuclease_3 | 1172 | 1283 | 6.90E-47 |
| PF14622.9 | Ribonucleas_3_3 | 980 | 1105 | 4.30E-25 |
| PF14622.9 | Ribonucleas_3_3 | 1149 | 1286 | 4.30E-25 |
| PF00271.34 | Helicase_C | 379 | 489 | 2.30E-17 |
| PF04851.18 | ResIII | 23 | 192 | 1.20E-13 |
| PF03368.17 | Dicer_dimer | 559 | 634 | 4.70E-13 |
| PF00270.32 | DEAD | 24 | 160 | 6.80E-13 |
| PF02170.25 | PAZ | 842 | 942 | 2.60E-10 |
| Gene family | Subfamily |
|---|---|
| Epigenetic Regulators | DCL2 |
| GO term | Description | Category |
|---|---|---|
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0006396 | RNA processing | Biological Process |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0003677 | DNA binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR036389 | Ribonuclease III, endonuclease domain superfamily |
| IPR000999 | Ribonuclease III domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003100 | PAZ domain |
| IPR006935 | Helicase/UvrB, N-terminal |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR038248 | Dicer dimerisation domain superfamily |
| IPR005034 | Dicer dimerisation domain |
| trEMBL term | Description |
|---|---|
| A0A1S2XD67 | _ |
| SwissProt term | Description |
|---|---|
| DCL2_ARATH | Endoribonuclease Dicer homolog 2 |
| KO | Description | Enzyme |
|---|---|---|
| K11592 | endoribonuclease Dicer | [EC: 3.1.26.-] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G03300 | dicer-like 2 |
| Medicago sativa L. | MsG0880045344.01.T02 | _ |
| Oryza sativa L. | LOC_Os09g14610.1 | DCL2, putative, expressed |
| Cucumis sativus L. | Csa006562 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur004588s00038717.1 | _ |
| Codonopsis lanceolata | Cl_chr03_18640T | _ |
| Arachis hypogaea L. | AH14G08790.2 | Endoribonuclease Dicer homolog 2 like |