Gene detail

Detail information of Am06G009830.1 Annotation

Gene ID	Annotation
Am06G009830.1	Glycosyl hydrolase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G009830.1	mRNA	Chr06	26265983	26271222	-

Sequences

CDS:

>Am06G009830.1
ATGGGTTTGGTTCATTTGTTGAGTGTTTTGTGGCTAAGTTGTTGGTTGGTATTGAATGGAGAAGCTCAAGTTTACAAGGATCCAACGCAACCGGTTGCAAATAGGGTTAAGGATTTGCTAAGTAGAATGACTTTGGAGGAGAAGATTGGTCAAATGGTTCAAATTGATAGAAGTGTCGCCAATGTTAATGTTATGAAAAATAGTTTCATTGGGAGTGTATTGAGTGGTGGTGGTAGTGAACCCCTTCCAAAGGCTACTGCTGAAGATTGGGTTAATATGATAAATGAATTTCAAAAAGGTGCTCTGGCAAGTAGATTGGGCATTCCAATGATGTATGGTATTGATGCTGTTCATGGGCACAATAATGTTTACAATGCTACCATATTTCCCCATAATGTTGGCCTTGGATGTACCAGAGATCCTGACTTGGCAAAAAGAATTGGTGCTGCAACTGCTCTTGAAGTCAGAGCTACAGGGATTCCTTATGTTTTTGCTCCATGCATCGCGGTTTGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTATAGTGAGGATCCTAAAATCGTGCAAGAAATGACAGAGATAATACCTGGTCTACAAGGAGATATCCCTGCCGATTCCAAGAAGGGATTTCCATATGTTGGTGGCAAGACAAAGGTAGCAGCTTGTGCGAAGCACTTTGTTGGAGATGGTGGTACGGCGAAGGGAAAAAACGAGGACAACACAGTGATTGACTGGCGTGGATTGCTGAGCATTCACATGCCTGCCTATTCTGATTCCATCCTTAAGGGGGTCTCTACTGTCATGGTCTCATACTCTAGTTGGAATGGTGTGAAGATGCACGCGGATCGTGATCTAATCACTGGCTTCCTCAAGAATACCCTTAAGTTTAAGGGATTTGTCATCTCAGATTGGCAAGGTATTGACAAAATCACGACACCAATTGATTCAAACTACACGTACTCGGTCCAAGCTTCCATCGAAGCCGGTGTTGATATGGTAATGGTCCCATACAAATTCAACGATTTCATTCAGGATCTTAACCTCTTGGTCAAGAGCAATATCATTCCAATGGACCGTATTGATGATGCTGTCGAGAGAATTTTACTTGTAAAGTTCACCATGGGTCTTTTTGAGAATCCTCTAGCCGATTTCAGCTTAGTCAATGAGCTTGGAAGCCAGGAACACAGAGTCCTTGCAAGAGAAGCTGTGAGAAAATCTCTAGTGCTTCTCAAGAATGGGAAAAACGGAAGCGCTCCACTTCTTCCTCTTCCAAAGGCAATCCCAAAACTCTTAATAGCCGGCACTCATGCTGACAATTTGGGTTACCAATGCGGTGGATGGACAATCAAATGGCAAGGATTCACTGGCAACACTGACACAAGTGGAACGACTATTCTCAGTGCTATAAACTCAACAGTTGATCCAAGCACAGAAGTTATCTTCCGTGAGAATCCCGATAACGTGTTTGTTAAGTCGAACAACTTTGAATATGCCATTGTTGTTGTTGGTGAGCTTCCTTATGCTGAGACGGCTGGTGACAGCACATCACTTACATTGGCGGATCCTGGTCCAAATATCATCAACAATGTTTGTGGGACTGTCAAGTGTGTGGTTATCGTCGTTTCTGGCAGACCTCTTGTGGTTGAACCATATGTTTCCAACATAGACGCGTTGGTTGCTGCATGGTTACCAGGTACTGAGGGACAAGGTGTGACAGATGTCCTTTTTGGTGATTACGGTTTCAGTGGTAAACTTGCTAGGACATGGTTCAAATCTGTAGATCAACTCCCAATGAATATTGGTGATTCTCACTATGATCCACTTTATCCTTTTGGTTTTGGACTGACAACCGAGTCCGTCAGAGATCTAGTAGAAAGGTCAACCTCAGCTACTGTAGGTGTTAGAGCTTGTATATTTACCATTATGGTGACACTACTCATCGGCTCATATTTAACTGGTTAA

Protein:

Promoter(3k):

>AM06G009830.1
ATTGGGTAGCGAGGGAATACAATCCGTCGCTAATTTTAGCGACGGAAAATCCGTCGCTAAAATCCGTCACTAAACACTGTGCACACTGACCGTTGCAGCTGATTTGACAGTGACACTGACCAATTTTAGCGACGGAAATCCGTCGCTAAAATCCGTCGCTAATCTCTTTTTTTTTAAAAAAAAAATGCTAATCTCAGATAGAAAGAGGGAGAGATAAGGGGTTGGGGAGGAAAATGGAGAAGGAAAATAAATGAAAGAGGATGGTGTGGTGGTGGTGGTGTTGTGTTGAAGGGAGAAGATGAAGATGATGGTGGTAAGAAAAAATGAAAGAGGAAGAGGAAAATGGAGAAGGAAAAGAAATTAAAGAGGAAGAGGAGGAAATGAAAGAGGATGGTGTGGTGGTGGTGGTGGTGGTGGTGTGGTGTGGTGTGGTGTTGAAGGGAGAAGATGATGGTGGTGGTGGTAAGAAAAAATGAAAGAGGAAGAGGAAGAAATGAAAGAGGAAGAGGAAGAAATGAAAGAGGAAGAGGAAAATGGAGAAGGAAAAGAAATTAAAGAGGAAGAAGAGGAAATGAAGGAGGATGGTGTGGTGTGGTGTTGAAGGGAGAAGATGATGGTGGTGGTGGTAAGAAGAAATGAAAGAGGAAGAGGAAGAAATGAAAGAGAGGAAAAAACGGAGAAGAGGAAGAAATGAAAGAGGAAGAGGAAGAAATGAAAGAGGAAGAGGAAGGATTCGGGTTTATAAAAAAAAAATTACCCGTTAGCGACGGATTTAGCGACGGATTTCCCTCGCTAATGTCTGTCACGTGTCAAATCAACTGCAACGGATTTAGCGACGGATTTCCGTCGCTAATTCAAATTTTTTTTTCAATTTTCGCGCCATGTTAAATCCGTCGCTAATTTAACCAATTTCCGTCGCTAAATACCTTGTTTTCAATCCGTCGCTAATTTTGTGTAAAATCCGTCGCTAATTTTGATTTTAGCGACGGACCACATATCCGTCGCTAAAATCCGTCGCTAAACACTGTTTTTTTTGTAGTGAACTAAATCGTAAAAATAATGGCTTAACTCGTTTATATATTAGATATGATGATTTTTTTTACAAAACTCAATTCAATTGATTTAAATAAGGTGATGTAATACAACTCGGTATAGATGAAAATAATTTGAAACAAACAAATAATCTAAAAACCCTAGCAATATAAGGAATTGTTTGGTTAGCTTATCTCCAAACAAAATTTTGTCATATAATTTAGCAAAGTGCAACGTTTAACAAACATCTTAATCTTAACTTTCAACAAAAAAGAAACCATCTTAATCTTATTCAGGGCCGTGGATAAATGCAAGGCTAGCAAGGCAATGGCCTTAGGCCCCGACCAATGGTACACTTTTTTTTTTTACCAAATAGTAGTACACATTTTCTACAGAGCCCTGAATCTTACACCATGTTTGGTAAACTGGTAAGAAAATGAATGTTAGAGGAAAGAAAGTGAAAGGAAAAATTGTACGAGGAAAGAAAGAGACTAGAAAGTGAGAGAATTGTTTAGGTTGTTTGGTTAAGAGAAAGTAGAGTAAAATGCGAGAGGAGTGAGAGATGTATAATTGTAAATTGACATAAATACCTATGTAGTAGTTTTTATCAAATAAATTAGTTTTGAAAAATAAACTTCAAAAGTAATTTCAATTAAGCTATTATATATTAAAAATGTAAATAGTTTAGATTTCAATATAATAATTATTATATGATGATTTAAAAGAATTTTTGTTTTTGTTTTTAAATATGTTAAGTTTAAAGAATAACTGTAAAACCAATGAGAGAAGAAATAATAACTCTATTCAACTAGTGTTATTAAATAGTTTTAGATTAGGTTTAGCTAATAAGAGATAAAAGCCAATAAAATGTTGTGCAAAAAATTGCAGTGAATAGCGTAGGTGCAACCTGGAATAAAAATGATAAATTTTTACAGTGTTATTTCTGTCTTTTTAATGAAAAATGCAACTCAATCCATCTTTCCGTCCATAAGTGAGTGGATTGATTTTTGATGTGGGGCCCAGCTATCTATTTCTTTCCTTCCTCCTTTTCCTTTGTTCGAAACAAGGGAAAATCAGTCAATCCCTCGTCTTTCTCTCCTCTCAGTTTCTTTCCCTTTCCTTTCCTTGAAAACAAACACTGTGTTAATAGTATGATGATTGAATATCTGAAGAAAATCTATGACATAATAACAATATATAATTATTATTTATTAAATTGAAAGTAAGATATTTTATTTCCAGTTTCGTACGTGGTTTGTTTGTCCTTATCACGTTTATTTAGCATTCTCGAACTTCCCGCAGAGTAAAAATCGTGCACTTCAGCCGCAAGCTGTGGTAAGTGTCTCTCTCTCTCTCTCTCTCTCTCCCCATTGCCAAATACAAACACCCCCCCCCTCTCTCTCTCTCTGCTTCTGCACTGTGCCATTTCATTCCTTTTCCACTATTTTCACCACCCAATTGGATCCAAAGTTAACTTTTTAAATAGCATCTCATAAAGTCACCATTTTTCCTTTCCTTGTGAGTCTTCTTCATCCCTATTTTCTCTTTCTCTCCCTCTCCCTCTCACACCTACTTTACTTGAACTCTTCTATTGTTGCTTGTTTTGATTGATTGGTTCACTTCATTGCCTGCTCAAAATTTGTTCTCTGCTGCAAAAGCACCAATAAAAAAGTGTGCTTGATCTTTCTTGGTTATATTATATCCTCTATGCTCTATTTATTTAATATCATATCCCTTTTCACATTTGAATAAGAAAAAAAGATTGCTAATTTAAGTAATGGGGTTTGAGTTTTCTTGAACCCCATTTCATTGGATATGCTTTTCTTTTCCTGCTCTTTTCATTTACCTTATAGACCAAGTGGGGTATAAATCCAAAACTAAATATTGAATCTTTATTGGATTGGATGTGTTATCTTCTTTCCTCTCTTGTCATATACTGCAGGTGAAGCAAGAGTAGTAAAGTTCAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00933.24	Glyco_hydro_3	44	370	4.30E-71
PF01915.25	Glyco_hydro_3_C	409	618	4.70E-34

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GH3

Gene Ontology

GO term	Description	Category
GO:0005576	extracellular region	Cellular Component
GO:0009251	glucan catabolic process	Biological Process
GO:0016020	membrane	Cellular Component
GO:0004523	RNA-DNA hybrid ribonuclease activity	Molecular Function
GO:0003676	nucleic acid binding	Molecular Function

InterPro

InterPro term	Description
IPR036962	Glycoside hydrolase, family 3, N-terminal domain superfamily
IPR001764	Glycoside hydrolase, family 3, N-terminal
IPR017853	Glycoside hydrolase superfamily
IPR036881	Glycoside hydrolase family 3 C-terminal domain superfamily
IPR002772	Glycoside hydrolase family 3 C-terminal domain

trEMBL

trEMBL term	Description
A0A1S3E336	_

SwissProt

SwissProt term	Description
BGH3B_BACO1	Beta-glucosidase BoGH3B

KEGG

KO	Description	Enzyme
K05349	beta-glucosidase	[EC: 3.2.1.21]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G04885	Glycosyl hydrolase family protein
Medicago sativa L.	MsG0280007692.01.T01	_
Oryza sativa L.	LOC_Os03g53800.4	periplasmic beta-glucosidase precursor, putative, expressed
Cucumis sativus L.	Csa001054	_
Glycyrrhiza uralensis Fisch.	Glyur003239s00035880.1	_
Codonopsis lanceolata	Cl_chr03_43440T	_
Arachis hypogaea L.	AH14G08520.2	Beta-glucosidase BoGH3B like

Expression pattern