Detail information of Am06G008310.1 Annotation
Gene IDAnnotation
Am06G008310.1 Transducin/WD40 repeat-like superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am06G008310.1mRNAChr062160064521605700-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF08149.14BING4CT3424202.70E-35
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0000462maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Biological Process
GO:0016740transferase activityMolecular Function
GO:0032040small-subunit processomeCellular Component
GO:003068690S preribosomeCellular Component
GO:0016020membraneCellular Component

InterPro
InterPro termDescription
IPR036322WD40-repeat-containing domain superfamily
IPR015943WD40/YVTN repeat-like-containing domain superfamily
IPR019775WD40 repeat, conserved site
IPR001680WD40 repeat
IPR040315WD repeat-containing protein WDR46/Utp7
IPR012952BING4, C-terminal domain

trEMBL
trEMBL termDescription
A0A1S2XXQ3 _

SwissProt
SwissProt termDescription
UTP7_SCHPOProbable U3 small nucleolar RNA-associated protein 7

KEGG
KODescriptionEnzyme
K14768U3 small nucleolar RNA-associated protein 7

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT3G10530 Transducin/WD40 repeat-like superfamily protein
Medicago sativa L.MsG0180005007.01.T01 _
Oryza sativa L.LOC_Os01g08770.1WD domain, G-beta repeat domain containing protein, expressed
Cucumis sativus L.Csa005889 _
Glycyrrhiza uralensis Fisch.Glyur000125s00010012.1 _
Codonopsis lanceolataCl_chr07_26870T _
Arachis hypogaea L.AH19G30100.1Probable U3 small nucleolar RNA-associated protein 7 like

Expression pattern