Gene detail

Detail information of Am06G007840.1 Annotation

Gene ID	Annotation
Am06G007840.1	KNOX/ELK homeobox transcription factor

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G007840.1	mRNA	Chr06	19885644	19891856	-

Sequences

CDS:

>Am06G007840.1
ATGGAGGGTAGTAGTTCTTCTAATTTGATGATGGGTTTTGGAGAAAACAGTGGTGGGCTATATCCAATGATGATGATGCCTTTAGTCACTTCTCATCATCATCATCCAATAAATCAAAATCCTCCTAATACTACTACTACTACTAATGCAAACACAAGCGGTCTCTTCCTTCCCATCTCTTCCAACAATATTAACAGTACTGGAGGAGGAGATCAAATTCAAAACCCTTCTAATTCTACGATGTTTCACAATAACCAACCCACTGCCTTAGGTTATTATTTCATGGACAATAACACCAACAACAATATTGGAAGCTCCTCTTCTTCCTCTTCTTCTGTTAAGGCTAAGATCACGGCCCATCCTCATTATCATCGTCTCTTGGAAGCTTACGTCAATTGTCAAAAGGTTGGAGCACCTCCTGAAGTGGTGGCAAGGTTAGAAGAAGCAGTGAGAGTGGCTGGCGATGGTGTTGGATCAAGCTGTTTAGGTGAAGATCCAGCTCTGGATCAGTTCATGGAGGCTTATTGTGAGATGCTCATCAAGTATGAACAAGAACTCTCTAAACCCTTAAAGGAAGCCATGCTCTTCCTTCAAAGGATTGAGTCTCAGTTCAAAAATCTTACTATTTCTTCTTCAGATAATAATATTGCTTGTAATGAGGGTGGTGAAAGGAATGGATCATCTGAAGAAGATGTTGATCTATACAACAATATAATAGATCCTCAGGCAGAGGACAGGGAATTAAAGGGTCAGCTTTTGAGGAAGTACAGTGGATACTTGGGAAGTCTGAAGCAGGAATTTATGAAGAAAAGAAAAAAGGGAAAGCTACCTAAAGAAGCAAGGCAACAATTACTTGAATGGTGGAGCAGACATTACAAATGGCCTTACCCATCTGAATCACAGAAGCTGGCACTTGCAGAGTCGACAGGTTTGGATCAGAAGCAAATTAACAACTGGTTTATTAACCAAAGGAAACGGCACTGGAAGCCTTCAGAGGACATGCAATTTGTGGTGATGGATCCAAGTCATCCACATTATTACATGGATAATGTTCTCTCCAATCCCTTTCCCATGGATCTCTCCAACACCATGCTCTAG

Protein:

Promoter(3k):

>AM06G007840.1
TTCCAAACACAACCATCATTCACCAGAAGCCTCCACCTTCATTTTGTTTATAAATTTTAAAATAAGCCTCTATAGGACATTTAATTTTAATTTTAAAATTTAAAATAAACTAAAATGATCATATGATCATAATAGGAGTATATTATTGACCATATATAGAGTACATGTTATGCTTTCCTAAAAAGCACTCCTATGTGATTAGTATGTATTACAAAGTTAATTGAAATGTACTCGAAATGTCAAAAAAATTTGAAATACAAAATGAAGAGAGCATAAGCTGGGTGGGGGGACAATGGGATGCGACAATATGTACGTAAGGTGATAGAGCTTCTTTCACAATATACGGTATATTTTACGGGAAGTGATGCTAGTCTAGGCCTTTATCATGTTCATCATATGAACGAGGGAAGAAGGGATACATAGTAACATAGATAGATATCTATGACTATGGTGCTAGAAATAGAGTGCGAGAAAAAGAAGAAGAGACATTCGGACTGTCCCACAAGCTTTACCAGCTTTATTTTACTTAGCTGCACTGCAAAGACGCGCTTTTTTCTGCGGTAAATAATACTAGTAATCAGATTACGTTAGATTAGATGCTAGCTAGCATATAGACTTAATAAAGCATCCATCGTCACCACTCATCATGTTCTGTTCAATAAAAGAAAAAAGTAAGTTAAGTTTCTCAGTTATCGAAAAATTAATTAAAAATTGTAAAAAAATTACAAATAGATAAAAAGTACTCCCTCCCTCTCACTATTATGGTCGTTTTAAAAAAAAAGTAAGGAGTTTCATTTTATTTGACGTTTTTGGAACTAAGTTATTTTTGAAAACGCAAAATATCCTAATTATTGACCATTTACATCAAAAGTTTCTAAGCTTAGTTCAGCATATCACACAGTCTAATGGATTAGATAAAAACTAAGAATTGTTACCTAAGCAGTTGAATGAGGTTATAGGGATCTCTTCGGCTTAACCAAGGTCTTGAATTCGAATCCAGTTTTGGACATGCAGCAGTGTTGCTCATTGTGGTCCTATCTGACTCGAGGGATTAGTCTCTGTAATTGCGCACAGAGAATACTTAATTTATACAACCAAAAAAACTAAGAATTGTTGGCTTATATTAAAATGAATTCTACAAAACAAGAATCAATTTGATCCACCGAAATTTTGTAATCCAAACACATGAATAATTTTTTTTAATTTTATTCACATTGTTTTTGCCCTAACAACTTATTCCAAGCTCTTCAAAATCTTAAACAAACAGGCACAAAAGCCCGGTACAATAATGATGTAAAATTTTCTAGTTCTTTTTTTAATTAGCAAAATAGATTCAACAATGGGAACAAGGAGTATTTGATTAGTAGTACTTGGGTGATAATCGCCAATTCTCAAAAGACATACTAGTATTTGATTGTTTGCCCGCCCTCTCTATGAACCATAACCACGACACCCCTACTATATGGCTAAACAACTCATTACCATCAACAATAACACCCTGAAAAATCACATCATTCATTGTTCCCCATAACACCCAAGTAGTTGCTAGCAAAACTAAGTATCTCACATTTTTTGCTTTACTTGAGATTCTCCATATTGCAAGAAATTTTGCATTGGATCAATATGAGGAACGTCGAAAACTCCTACCCGTTGAGAGACCATGTACCAAATACTAGTAGATGAGCTACAAACAAAAAATAAATGCTCAATTGATTCATTAACCTAGAAGCAAAATGGACAAGTTGTATTATGAGGATCCGAGATGCCACAGTTCAATAGATTATTTCCTAGGTTATCAAGGCTACACTAACATTAGGAAATAACATACGTTACACTGTCAATTAGGGGTGTCAAACTTGGCCCCAGGCCAAAACACAAAAGCGGGTTGGTCAAACTCATCTATCTATTTAAAAAGCATGCTCAATCTGACTGATGAGTTGGACTAAAATGACTCAATATTTATATATACCAGCCTAAACCAGAACACTGGACTATTAGAGCGACTCGTTGAGCTAGCCAAATTTGACTCTCTACTAGTAGTAACTTCAATGAATTTTTTGACAGCAGTAATTTCTATGACTTGAAAGTCCCACGTACCATCAGAGAAAATGCACCGATTTAAACATAGCCATAGGACGGTAACAAACAAGGAACCAGATAAAGCAAAGAATGAAACCGATCGTGGAATGGTATGATGAATTAAAACCCTAATGGTTCAAGAATGATAATAGTTTTATATTATTGGAGCAAGAAAAGGACAAAGGATATGAGAATATAAGCTAATTAAAAAAAGAGAGGTAGTACAAGAATATAAGAATGGAGTGAGAGAGAGAGAGATATAGAGAGAAAGCACAGGTTGATTGATTCCGTCTCGTCTACTCTCATCTCCATAGTAGGTAACTTGTTTTCTCTTCCTCGATTTGATCGTTCGTTCCTCTCACACACTATTTATTATCTCTATCTCTCTCTACTGCTTTTATATGGCAGAAAGAAAAGAAATACAGCAGGGTATCAGTGGCAGTGCAAGAAAAGGGTGGTAGAGTTTTCATTGGGAAGGTAAAACCTTTTTTTGGCACCAATACCTTACAAGAACCCTTGTTCTCACCTTCTTCAGTAACTCAAGTGTTAGTATCATCGTTTTCTCTGTGTGCCCCGCGTGCACTAACCTTGTACCCACTAGAAAGCAAAGAGGGTAATTCATTAATGTTAGCTGAAATGGGTTGAAAGATAGATTAACTCTCATTTTCCAAAGGAAATCTATCTGTGCAGTGCAGTTTTGCCAGACAAGTTAAGTGAGATAAGAAAAGAAAACCTCTACAGTACACATACACTCTACTACTTCATCTAGTAACTGACTGTAACTATACCCAACACTATCACTATTTAGGATTTTCTGTAAAAAGCCTCTTACTTTTTACCATAAAACCCGGGAGAGTTCTCTCAACATATTATAATAACTAAGTGAACTCACTCTATCTAGTGTAGTGAGCTAGAGAGAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03791.16	KNOX2	162	208	5.70E-22
PF03790.16	KNOX1	113	151	4.30E-21
PF05920.14	Homeobox_KN	287	326	1.70E-17
PF03789.16	ELK	247	268	2.30E-11
PF00046.32	Homeodomain	290	327	5.10E-07

Gene family

Gene family	Subfamily
Transcription Factors Family	HB-KNOX

Gene Ontology

GO term	Description	Category
GO:0009934	regulation of meristem structural organization	Biological Process
GO:0010582	floral meristem determinacy	Biological Process
GO:0048440	carpel development	Biological Process
GO:0003723	RNA binding	Molecular Function
GO:0005886	plasma membrane	Cellular Component

InterPro

InterPro term	Description
IPR005541	KNOX2
IPR005540	KNOX1
IPR009057	Homeobox-like domain superfamily
IPR017970	Homeobox, conserved site
IPR008422	Homeobox KN domain
IPR001356	Homeobox domain
IPR005539	ELK domain

trEMBL

trEMBL term	Description
A5Y4G6	_

SwissProt

SwissProt term	Description
HSBH1_SOYBN	Homeobox protein SBH1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G62360	KNOX/ELK homeobox transcription factor
Medicago sativa L.	MsG0180000373.01.T01	_
Oryza sativa L.	LOC_Os07g03770.1	Homeobox domain containing protein, expressed
Cucumis sativus L.	Csa000554	_
Glycyrrhiza uralensis Fisch.	Glyur001158s00022948.1	_
Codonopsis lanceolata	Cl_chr01_47790T	_
Arachis hypogaea L.	AH04G04560.1	Homeobox protein SBH1 like

Expression pattern