| Gene ID | Annotation |
|---|---|
| Am06G007750.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G007750.1 | mRNA | Chr06 | 19710110 | 19712627 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 130 | 176 | 2.10E-84 |
| PF13041.9 | PPR_2 | 329 | 377 | 2.10E-84 |
| PF13041.9 | PPR_2 | 431 | 478 | 2.10E-84 |
| PF01535.23 | PPR | 134 | 163 | 1.10E-76 |
| PF01535.23 | PPR | 332 | 362 | 1.10E-76 |
| PF01535.23 | PPR | 433 | 461 | 1.10E-76 |
| PF20431.1 | E_motif | 653 | 710 | 5.70E-08 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0009451 | RNA modification | Biological Process |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0043231 | intracellular membrane-bounded organelle | Cellular Component |
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR046960 | Pentatricopeptide repeat-containing protein At4g14850-like, plant |
| IPR002885 | Pentatricopeptide repeat |
| IPR046848 | E motif |
| trEMBL term | Description |
|---|---|
| A0A1S2XCU6 | _ |
| SwissProt term | Description |
|---|---|
| PP303_ARATH | Pentatricopeptide repeat-containing protein At4g04370 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G04370 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0280007400.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g56850.1 | pentatricopeptide, putative, expressed |
| Cucumis sativus L. | Csa006541 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000035s00004955.1 | _ |
| Codonopsis lanceolata | Cl_chr03_08520T | _ |
| Arachis hypogaea L. | AH04G04460.1 | Pentatricopeptide repeat-containing protein At4g04370 like |