| Gene ID | Annotation |
|---|---|
| Am06G007680.1 | root hair specific 14 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G007680.1 | mRNA | Chr06 | 19598287 | 19600628 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00544.22 | Pectate_lyase_4 | 117 | 302 | 4.70E-29 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | PL1 |
| GO term | Description | Category |
|---|---|---|
| GO:0030570 | pectate lyase activity | Molecular Function |
| GO:0045490 | pectin catabolic process | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| GO:0046872 | metal ion binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011050 | Pectin lyase fold/virulence factor |
| IPR012334 | Pectin lyase fold |
| IPR045032 | Pectin lyase family |
| IPR002022 | Pectate lyase |
| IPR018082 | AmbAllergen |
| trEMBL term | Description |
|---|---|
| A0A151T6T8 | _ |
| SwissProt term | Description |
|---|---|
| PLY16_ARATH | Probable pectate lyase 16 |
| KO | Description | Enzyme |
|---|---|---|
| K01728 | pectate lyase | [EC: 4.2.2.2] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G22080 | root hair specific 14 |
| Medicago sativa L. | MsG0280007276.01.T01 | _ |
| Oryza sativa L. | LOC_Os04g05050.2 | pectate lyase precursor, putative, expressed |
| Cucumis sativus L. | Csa024692 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001158s00022960.1 | _ |
| Codonopsis lanceolata | Cl_chr03_22340T | _ |
| Arachis hypogaea L. | AH01G28940.1 | Probable pectate lyase 16 like |