| Gene ID | Annotation |
|---|---|
| Am06G006630.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G006630.1 | mRNA | Chr06 | 16190995 | 16193283 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 176 | 226 | 5.30E-84 |
| PF13041.9 | PPR_2 | 248 | 296 | 5.30E-84 |
| PF13041.9 | PPR_2 | 291 | 331 | 5.30E-84 |
| PF13041.9 | PPR_2 | 317 | 366 | 5.30E-84 |
| PF13041.9 | PPR_2 | 356 | 400 | 5.30E-84 |
| PF13041.9 | PPR_2 | 388 | 421 | 5.30E-84 |
| PF13041.9 | PPR_2 | 423 | 471 | 5.30E-84 |
| PF13041.9 | PPR_2 | 463 | 506 | 5.30E-84 |
| PF12854.10 | PPR_1 | 313 | 345 | 7.30E-66 |
| PF12854.10 | PPR_1 | 348 | 380 | 7.30E-66 |
| PF12854.10 | PPR_1 | 384 | 416 | 7.30E-66 |
| PF12854.10 | PPR_1 | 418 | 449 | 7.30E-66 |
| PF12854.10 | PPR_1 | 453 | 485 | 7.30E-66 |
| PF01535.23 | PPR | 320 | 350 | 7.70E-62 |
| PF01535.23 | PPR | 355 | 384 | 7.70E-62 |
| PF01535.23 | PPR | 390 | 420 | 7.70E-62 |
| PF13812.9 | PPR_3 | 445 | 502 | 3.60E-34 |
| PF17177.7 | PPR_long | 369 | 523 | 5.00E-20 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
| GO term | Description | Category |
|---|---|---|
| GO:0009507 | chloroplast | Cellular Component |
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | Molecular Function |
| GO:0016114 | terpenoid biosynthetic process | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A1S2XM97 | _ |
| SwissProt term | Description |
|---|---|
| PP393_ARATH | Pentatricopeptide repeat-containing protein At5g18950 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G18950 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0580029921.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g24880.1 | PPR repeat containing protein, expressed |
| Cucumis sativus L. | Csa000341 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000532s00020758.1 | _ |
| Codonopsis lanceolata | Cl_C13485_unscaffolded_00010T | _ |
| Arachis hypogaea L. | AH12G02050.1 | Pentatricopeptide repeat-containing protein At5g18950 like |