Gene detail

Detail information of Am06G006300.1 Annotation

Gene ID	Annotation
Am06G006300.1	Protein kinase family protein with ARM repeat domain

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G006300.1	mRNA	Chr06	15179434	15185752	-

Sequences

CDS:

>Am06G006300.1
ATGAACCAGTACCACATCTACGAAGCCATTGGTCGCGGCAGATACTCCACCGTCTACAAAGGCAGAAAGAAGAAGACAATTGAGTATTTCGCCATCAAAAGCGTTGATAAATCGCAGAAAACCAAGGTTCTTCAAGAAGTTAGGATTCTTCACACTTTAGATCACCGAAATGTGCTCAAGTTTTATTCATGGTATGAAACTTCTGCTCACCTATGGTTGGTTTTGGAGTATTGTGTTGGGGGCGATCTGATTTCGATATTACGTCAGGATAGTCAACTTCCTGAAGATTCAGTTCATGATCTTGCTAGTGACCTAGTCAGTGCTTTGCAGTTTTTACATTCAAATGGAATAATTTATTGTGATCTGAAACCATCAAATATCCTACTAGATGAAAATGGATGTGCAAAGCTATGTGATTTCGGATTGGCTAGAAAGTTAAAAGAGATATCAAAAGTTCCTTCTTCCTCGTTGCCTCAAGCAAAGCGTGGAACACCCTCTTACATGGCTCCAGAGCTTTTTGATGATGGTGGAGTCCATTCTTATGCTTCTGATTTCTGGGCCCTAGGTTGTGTACTATATGAAAGTTATGCTGGAAGGCCTCCTTTTGTGGGAAGAGAATTCACTCAGCTTGTAAAATCCATTATTTCAGACCCGACTCCACCTCTTCCTGGCAATCCAAGTCGACCTTTTGTCAATTTAATTAATTCTCTGTTAGTAAAAGATCCAGCTGAAAGAATACAGTGGCCCGAGCTTTGTGGACATGCCTTTTGGAAAACCAAATTCACTCTAGTGCCTCTGCCTCCTCAACCTGCGTTTGATGATATGATAGAGCTACATGCTAAACCATGCTTATCATCAGAACGTAATGGGGATAAATCTTCTCATAATAGGACCCCTCCCAGACATCGTGAAAAAGACGTGAAAGGGGTGCTAAAGAAGGATGAAAATTCTGTTTTAGGTTCTCGGGGCATTGAGACACCAACAAGAGCAACACCAACGAGAGCAACACCAATTGTTCACAAAACTCAGACCAAGGGGTCTGGCAGAACAATTGAGGTGAAGCAGAAAGATACTTCCAATATTAGCAAGGGCGTGAATCTTTTGAGACTGTCAAGAATAGCCAAGTCAAATTTACAAAAAGAAAATGAGAAAGAAAACTACCGACGTCCCTTGCCCAATGGCTCTGAGAATGATGCTGATGTTAAAATTGAGAACATTGATATGGAACTTGATTTTAACGAGAATAGTGAAGAGGATGCACACGAAGAAACCGATGATGGTTCTGAACATACAACTCCTGTGCCTGTTGAGAAAATGCAGAATCACTTTCAGAATCAGGGAAAAGCAGAGGAGGTTGAAAATAATATACACCAGTTGGACACCCCATCTGTGACTACTCCTGCCTCAGATGATCCTAGGTCTTTTGATCACGAGCCAGCTTCTGACCGCCCTGACATATCTGCTTTTTCTCCTAGCATGAGCCCTCAAGTGAAGAAACAAAGACCTAAAGAAGATGCAGGATCTGGCCTTGACTCTGATTCTTCGCGATCATCCAACAATGTCTCCCAGGTTATTTGGCATCCGTCTGATCTCTCAGTCAGACCTGTAATGCCCAGCAGAAAAGTTGATAAAGTCTCTGAAGTCATTCCTTCACTTCCTTTTGAGGTATTGCAAGCATCTGATTTTGTCAAGATGCCTAAAGAGCAACTGGAGACAGTCCACAACCGAATTTTAGCCATATTGAATGGGAATACCAGCATTGGAGAGAAACAGAATGTGATTAGGTATCTCGAGATGTTGAGCAGTAATGCTGATGCAGCCAATATTTTGACCAATGGGCCAATAATGCTCATGGTTGTAAAGTTGTTACGTCAATCCAAGGCATCGGCTTTACGTGTTCAACTTGCTTCACTGATCGGTCTGCTGATTAGACACTCCACTTTTGTTGATGACAGTCTGGCTACTTCTGGAATTTTAGGTTCACTGACGGATGGCCTTAGAGACAAGCAGGAAAAAGTTAGGAGGTTTTCCATGGCTGCGTTGGGTGAGTTGCTATTTTATATATCCACCCAAAATGCGGACTGCAGGGATAATCCACTTGAATCTCCATCAAAGGACAATAGGACTGCGAATGGCTGGCAGGTTCCAAATTCATTAATATCCTTTGTGTCATCTATATTGAGGAAAGGGGAGGATGATATAACTCAACTGTATGCATTGAGAACCATTGAGAATATTTGCAGTCAAGGAGGGTTATGGGTGGGACGTTTGACCAGTCAAGATGTTATTAGTAATCTCTGCTATATCTATAAAGCAGCAGGGAAACAGGAGAGCATGAGGCTTACTGCAGGATCATGTTTGGTGCGCTTAGCTCGTTTTAATCCTCCTAGCATTCAGTCGGTTATAGAGAAACTCTCATTCAAAGATCTAGCTTCTGCTCTTGTCAAGGGCAGTCTACGAGAGCAGCAAATCAGCTTAAATCTTCTTAACATGGCAATGCTGGGAAGTCATATCTTCACAAATATTGGAAGATACCTTATTCCACTTGCGGAGGATAAGAATCTGATCCCTAGTCTTCTGGCTCTTGTTGAGCAGGGTAATGGAGTTTTAAAAGGAAAGGCACTTGTCTTTGTGGCTCTCCTCTGTAAGCATGGTAGGAGGTGGCTTCCACAGTTCTTTTGTAGCCAAAAGTTACTTTCTGTGGTGGACAGGCTGGGAAAGGAAAAGGATGACTTTGTGCGTCAGTGTTTAGGTGCATTTTTGCAAATTGTGGCATCTACTATTCCAGGTTTACTGGATATAATAGCCGTGGATATCCAGCAAATGATGGGGGGAAGGCGCCATGGACATATGTCTCCCCTTACCAGCAGATCTTCCCCAAAAGCCAACATCCATTTGTTTCCTGTTGTGCTTCATCTTCTAGAAAGTTCAGCTTTTAAGCACAAAGTGGCGACACTTCCAGTACTGCGGCAGTTGGCAAATCTGATTAAATTCGTGGAGACACCGTTTCAGGGAAGAGATGACTTCCAAATAACCCTTCTTCGAATTTTAGAATCCCTGACAGAGGAATCTTCCGTGATCCTTGGCAATCCTGACATTTTCATACGTGAAATCCTCCCTAGTTTGACAGTTCTCTATAAGGGTAACAAGGATGGTAATGCCAGATTTTTGTGCCTTAAAATTCTGTTTGACGTGATGATTATTCTTTTGAGTGAACCAATTGAGGAAGAGCAAAGATTGAACGATCTGAAATTCATATCAAATGCACGTTTTCTTCCTCTCTACCCAACCTTGATTGAAGACGAAGATCCTATTCCTATCTACGCACAAAAGCTTCTGGTCATGCTATTAGAATTAAGTTTCATTTCAATTCCAGACATTCTACAACTGAGGACAATTTCACAATGCTTTGAGTTCTTGCTTGGTGATCTGTCAAATGCCAATGTGACTAATATTAAGCTGTGTCTTGCTTTAGCTTCTGCTCCTGAAATGGAGTCCAAGTTACTCTCTCAATTGAAAGTTGTTAGGAGGATTGGCAACTTTCTCGAGTTTGTATGTGCCAAGAGTATGGAAGATTTGCTGGAACCAACTCTTTGGCTGTGTAGGGCTTTTCTAGTTCGTTCAGTCAGCTGTGCAAAAGGCTTCAACTACACAACAGAACCAACTCTCTTAGGTGACTGTCCTCCCGAGGTGAGTGGTGCTGTTGATCCCCAACAATGCATACGAGATATAGCAGACTTTGGGAGCAATGTTGGTGTCTTGCTAGAGTTGAGTGCCTCTAGAGAGACCAATATTACTGATATAGCTTCTGAATGTGTGATTTTACTTCTCAAGGCAGCACCTAGAGAAGCCAGCACCGGTCTACTAACCAATCTCCCCAAGATCAGTGTGATCCTAGAGTCCTGGAGTAAAGGCACCGCTCATTCAACCGTGCAGCGAATGCTTCATGCTTTAGGTTATGCTTGCAAGCAGTACTTATTGCATGCAATGATATTATCAATTTCTATACCAGAGATTTCAAGAATTGAAGTGATAGTTTCTGAACTCAAGAGTTCAGGTGTTCCTGCTTTAGCCAAAACTGCTGGGTTGGCAGCTTCGGAGTTGCAGCGTCTGCCTCGCTGCATTTAA

Protein:

>Am06G006300.1
MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKTKVLQEVRILHTLDHRNVLKFYSWYETSAHLWLVLEYCVGGDLISILRQDSQLPEDSVHDLASDLVSALQFLHSNGIIYCDLKPSNILLDENGCAKLCDFGLARKLKEISKVPSSSLPQAKRGTPSYMAPELFDDGGVHSYASDFWALGCVLYESYAGRPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAFWKTKFTLVPLPPQPAFDDMIELHAKPCLSSERNGDKSSHNRTPPRHREKDVKGVLKKDENSVLGSRGIETPTRATPTRATPIVHKTQTKGSGRTIEVKQKDTSNISKGVNLLRLSRIAKSNLQKENEKENYRRPLPNGSENDADVKIENIDMELDFNENSEEDAHEETDDGSEHTTPVPVEKMQNHFQNQGKAEEVENNIHQLDTPSVTTPASDDPRSFDHEPASDRPDISAFSPSMSPQVKKQRPKEDAGSGLDSDSSRSSNNVSQVIWHPSDLSVRPVMPSRKVDKVSEVIPSLPFEVLQASDFVKMPKEQLETVHNRILAILNGNTSIGEKQNVIRYLEMLSSNADAANILTNGPIMLMVVKLLRQSKASALRVQLASLIGLLIRHSTFVDDSLATSGILGSLTDGLRDKQEKVRRFSMAALGELLFYISTQNADCRDNPLESPSKDNRTANGWQVPNSLISFVSSILRKGEDDITQLYALRTIENICSQGGLWVGRLTSQDVISNLCYIYKAAGKQESMRLTAGSCLVRLARFNPPSIQSVIEKLSFKDLASALVKGSLREQQISLNLLNMAMLGSHIFTNIGRYLIPLAEDKNLIPSLLALVEQGNGVLKGKALVFVALLCKHGRRWLPQFFCSQKLLSVVDRLGKEKDDFVRQCLGAFLQIVASTIPGLLDIIAVDIQQMMGGRRHGHMSPLTSRSSPKANIHLFPVVLHLLESSAFKHKVATLPVLRQLANLIKFVETPFQGRDDFQITLLRILESLTEESSVILGNPDIFIREILPSLTVLYKGNKDGNARFLCLKILFDVMIILLSEPIEEEQRLNDLKFISNARFLPLYPTLIEDEDPIPIYAQKLLVMLLELSFISIPDILQLRTISQCFEFLLGDLSNANVTNIKLCLALASAPEMESKLLSQLKVVRRIGNFLEFVCAKSMEDLLEPTLWLCRAFLVRSVSCAKGFNYTTEPTLLGDCPPEVSGAVDPQQCIRDIADFGSNVGVLLELSASRETNITDIASECVILLLKAAPREASTGLLTNLPKISVILESWSKGTAHSTVQRMLHALGYACKQYLLHAMILSISIPEISRIEVIVSELKSSGVPALAKTAGLAASELQRLPRCI*

Promoter(3k):

>AM06G006300.1
GTTCCTCTTCCTCCCCCCTCCCCCTCCGTTCCACTGTTCACCCCTCCCCCCACCGTGAACCCCTCCCCTCAGATCTGGAACTCATCTCTCTCTCCTCACTCACGTTAAATCTGGAACTCATCCCCCTCTCTCTCTCTCTCTCTCCTCCTCTCCATCTCCTTCTCACTCCCGCAGATCGCACTCCCCCCTCTCACCACCGCCTCTCGTAGATCTCGCTCTCCCCTCTCACCACCGTAAGCCATCACTTACCAAACCCTCACCGTAGGAACGAAAGGGATAGAAGAGAGGAGGAGAAGAAGAGAGGATGGAGAGCGACGAGAGACACTACAAGAATTTAAGTTATTACTGGCTAACTCAATCCCCCAGTAATGCTGAAATTCGGCCAGAAATTGCACATTACTGACGGATTTAGTCCGCCAGTAATCAGCCAGAAAAACGGCCGCAGGTAATTGTTACTGGCGGAATTTCAGCCAGTAATGACTGGCGGACTTACTGGCGGAATTTCAGCCAGTAATTACTGGCTGAAATTCAGCCAGTAAATCCTCCAGTAATTACTGGCTGAATATCAGCCACTAAACAACCAAATCCGCCAGTACTGTATTATATATTTATTTTAAAAAAATATTTTTCAAATGGTTTTTTATATTTAAAATTTGTTGATATTTAATTCGTTTTTTATTTAAATTTTTTAAAAATAATTTTTTAATTCATTTATTTAATTCAAAAAATAAAATAATTACTAAATATTTTTTCTAAATGATAAAATTTTCATAAACTTGAATGCAATAAAGTACTAATTAAAATATCCATTACAAAATATAAATAGAAATAGTCATTACAAATGGAAATTAAAATATCTAGTAAAAGTACTAGATATCATAGTAGGAGGGTCCAGGGGTGTTGTTGTTGCTGTTGTTGTTGTTGCTGCTGGTGTTGGTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTTGTCATCATCCCCAAACCCAGCTAAAACAGGATCAATGTTGGTGTCTGTGTCGAACTGCTGTTGGGGTTGCTGGAGTTGCTGCGGCTGAGGTCGAGGAAGCTGTTGAGACTGCATATGTGGTTGCTGGAATTGCTGTTGAGGCTGTTGCTGCGGCTGAGAGTACGACTGAGAAATAGTGTGAATGAATGAAAAAAATTTTAGACACATTTGAGAGAAATGGTGGAATGAATAACAAATGAAATGAGAGGCTTCAGATTTTATAATGGAGGTAAGATGGAGAAGACGCATTGTGGCAGTTACTGGCGGATTAAAGGCCGTTTCTGGCGGATTAAGAAGGAGAAGACGCAACGCAACGGCTGTCACGAATATTACTGGCGGATTAAAGTGCATTACTGGCGGAATTGTGGCGGATTAAAGTGCATTACTGACGCATTGTGGCAGTAACACGCAACGGCTGTCATGAATATTACTGGCGGATTAAAGTGCATTACTGGCGGAATTGTGGCGGATTAAAGTGCATTACTTGTGGCAGTAACACGCAACGGCTGTCACGAATATTACTGGCGGATTAAAGTGCATTACTGGCGGAATTGGTCTGTGACGCGACATCTCACTGCCATCTTGTCTATATTACTGGTGGAACTTGCGTGTTACTGGCGGATATCATTACTGGCCATTTTTAACGGTCAATGCGCAGCTTTTGAGGGTATTTTCTGGCTGAAATTTCCGCCAGTAAATGCAATTACTGGCGGATATATTACTGGCGGAACTTGCGTGTTACTGGCGGATCTGCATTACTGGCGGAACTTGCGTGTTACTGGCGGAACTGCATTACTGGCCATTTTTGACAGTCAATGTGCAGCTTTTGAGGGTATTTTCTGGCTGAAATTTCCGCCAGTAAATGCAATTACTGGCGGATATATTTATTTATAAAATTATTTTAGTTTTTCAATTAATTTCCGCCAGAAATTTCTACTCAATCCGCCAGTAAATATACTGGCTGTTTAAATTCGACACAAATGTTATGGAATCCGCCAGAAACTTACTGGCAGACTAAATCCGCCAGAAATCGCATAATTCCACCAGAAAACTTACTGGCTGACTGATTCCGCCAGAAATGTCTAGCCAGTAATGCAAGTAATTCTTGTAGTGAGAGAGAACGGCGAGAGAGGGAACGACGAGATGCGAAGAGAGAGAGGGAGGAGGATCGGTGAGGGGAGAACGAACCAGAGAGGGAGGGGAGAGGAGAGAGCGAACCAGAGAGGGGGGCTGTGAGAGAGGAGGATCGGTGAGGGGGGAGGGGTGGAACCTTCGTTGATTGGGGATTTGGAGGTTTGGAGGTAGAAGACGATGAATAGTAACAGAAGACTGATTCGTCTCTTTTTTAAATTGTCAGGGACCGATTCGTCCCTTTTTTAAATCTAACGTGACACGTGGCACTTAACGTGCCACGTAGGACACGTTTACTGTGCTGGTAACGTCAAAATGGATGGAGGGACTAACGTGTCCTGTTTTGGGATTGTCAGGGACCAATGTGTCCCGAAAAAATTGTGAGGGACGAATTCGTCCCACGAAAAATTTGTCAAGGACCAATTTGGGCCTTTACTCAAACACTAAAAAGGGCTAATTGTATACACGTTATCTAACTTAAAAGAATAAGTTGATAAAAAAATTTTAAATAATCAACTTATTAAAAAAATAACTTTAAAAAGACCTCTATTGTAATCTCGCCTAAATTCAAGTTATCTTTATTCATCCATCCCGTCCAGTTTTTCTGTTTTAGTTCTAGTAGATTTATGAATGCAAACTCAAACACGAGAAATGATGCGTTAACAAAAAGTCGTATATTCCGGTCCCCTTCCAATTTCAAAAATAGCATAACCCCACAAATCCTGATTTTCAAATACCCCGCCCGTTTGCACAGTCTCTCTTTCTCTCTCTTCCGCTCAACTCGTTTTCTCGCTCATTGTTCATCCTCAGCATCAGCATTTGATTTCTGCGAAGTAAAACCCTAGATTGATCCACAGTCAAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	4	256	3.40E-65
PF07714.20	PK_Tyr_Ser-Thr	6	251	6.40E-40

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.2.5:ULK_ULK4

Gene Ontology

GO term	Description	Category
GO:0000914	phragmoplast assembly	Biological Process
GO:0008017	microtubule binding	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0004672	protein kinase activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR044591	Microtubule-associated kinase-like protein RUNKEL
IPR016024	Armadillo-type fold
IPR011989	Armadillo-like helical

trEMBL

trEMBL term	Description
A0AAN9MWQ7	_

SwissProt

SwissProt term	Description
RUK_ARATH	Serine/threonine-protein kinase RUNKEL

KEGG

KO	Description	Enzyme
K17545	serine/threonine-protein kinase ULK4	[EC: 2.7.11.1]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G18700	Protein kinase family protein with ARM repeat domain
Medicago sativa L.	MsG0280007086.01.T01	_
Oryza sativa L.	LOC_Os01g15480.1	EMB3013, putative, expressed
Cucumis sativus L.	Csa012508	_
Glycyrrhiza uralensis Fisch.	Glyur000189s00009609.2	_
Codonopsis lanceolata	Cl_chr08_17720T	_
Arachis hypogaea L.	AH14G03770.2	Serine/threonine-protein kinase RUNKEL like

Expression pattern