| Gene ID | Annotation |
|---|---|
| Am06G006130.1 | chromatin remodeling factor17 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G006130.1 | mRNA | Chr06 | 14912502 | 14921284 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00176.26 | SNF2-rel_dom | 209 | 476 | 5.20E-79 |
| PF09111.13 | SLIDE | 904 | 1014 | 2.50E-43 |
| PF00271.34 | Helicase_C | 499 | 611 | 9.40E-20 |
| PF04851.18 | ResIII | 195 | 355 | 4.20E-08 |
| PF09110.14 | HAND | 760 | 842 | 1.10E-07 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Others |
| Transcription Factors Family | SNF2 |
| GO term | Description | Category |
|---|---|---|
| GO:0016887 | ATP hydrolysis activity | Molecular Function |
| GO:0003677 | DNA binding | Molecular Function |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0004683 | calcium/calmodulin-dependent protein kinase activity | Molecular Function |
| GO:0004386 | helicase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR000330 | SNF2, N-terminal |
| IPR015195 | SLIDE domain |
| IPR001005 | SANT/Myb domain |
| IPR017884 | SANT domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR036306 | ISWI, HAND domain superfamily |
| IPR015194 | ISWI, HAND domain |
| IPR044754 | Isw1/2, N-terminal |
| IPR009057 | Homeobox-like domain superfamily |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| trEMBL term | Description |
|---|---|
| A0A8B8L9B7 | _ |
| SwissProt term | Description |
|---|---|
| CHR17_ARATH | ISWI chromatin-remodeling complex ATPase CHR17 |
| KO | Description | Enzyme |
|---|---|---|
| K11654 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 | [EC: 5.6.2.-] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G18620 | chromatin remodeling factor17 |
| Medicago sativa L. | MsG0280007072.01.T01 | _ |
| Oryza sativa L. | ChrUn.fgenesh.mRNA.85 | expressed protein |
| Cucumis sativus L. | Csa022055 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000189s00009589.1 | _ |
| Codonopsis lanceolata | Cl_chr02_13690T | _ |
| Arachis hypogaea L. | AH10G00010.1 | Putative chromatin-remodeling complex ATPase chain like |