Detail information of Am06G005690.1 Annotation
Gene IDAnnotation
Am06G005690.1 NOP56-like pre RNA processing ribonucleoprotein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am06G005690.1mRNAChr061344664913449929-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF01798.21Nop1774091.90E-84
PF08156.16NOP5NT4695.80E-19
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0046940nucleoside monophosphate phosphorylationBiological Process
GO:0032040small-subunit processomeCellular Component
GO:0005730nucleolusCellular Component
GO:0004017adenylate kinase activityMolecular Function
GO:0005524ATP bindingMolecular Function

InterPro
InterPro termDescription
IPR045056Nucleolar protein Nop56/Nop58
IPR012974Nucleolar protein 58/56, N-terminal
IPR012976NOSIC
IPR042239Nop, C-terminal domain
IPR036070Nop domain superfamily
IPR002687Nop domain

trEMBL
trEMBL termDescription
A0A6P4DEF6 _

SwissProt
SwissProt termDescription
NOP56_HUMANNucleolar protein 56

KEGG
KODescriptionEnzyme
K14564nucleolar protein 56

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT3G12860 NOP56-like pre RNA processing ribonucleoprotein
Medicago sativa L.MsG0880046243.01.T01 _
Oryza sativa L.LOC_Os03g22880.1nucleolar protein 5A, putative, expressed
Cucumis sativus L.Csa005306 _
Glycyrrhiza uralensis Fisch.Glyur000010s00000917.1 _
Codonopsis lanceolataCl_chr02_10440T _
Arachis hypogaea L.AH15G25950.1Nucleolar protein 56 like

Expression pattern