Gene detail

Detail information of Am06G005640.1 Annotation

Gene ID	Annotation
Am06G005640.1	Galactosyltransferase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G005640.1	mRNA	Chr06	13391648	13398149	+

Sequences

CDS:

>Am06G005640.1
ATGAAGAGATTGAAAACCGAACCTCCCAATTCTAGGAGGTTTAAACTGTCTCATTTTTTGTTTGGTATTGCGGTTTTGTATTTGATTTTCATATCATGTAACTTTACAAAGTTTCTAAGAATTGTATCAACGTTAAGTGTGGATGATGAAAGAGATAGTGGTTTGGATGGGAATGGGATAGCTATTGTGGATTCTGAGGATGCAGATTTAAGCAAACCTTTTGTTAGTTCTGTTTATAAAGATGCATTTCATAGGAGGTTAGAGAATAATATGGACATGGACGCTCCGTTGAGGCCAGACAAGGAACCGTTGAAGGACGGAGACCATGGCCGTGGTGGATCTACGGAGCATATTCCACGGGGTTATGGTAGGATTACTGGAGAGATGCTGCTGCAAATGAATAGGACAAGTGATTTGTCTGTGCTTGAGAGTATGGCAGATGAGGCATGGACATTGGGGTTGAAGGCATGGGAAGAAATAGACAAGGTTAATCATGATAACGAGTCTGGAGAAAGCTCTGTCATTGATGGAAAGCTTGAGTCTTGTCCTTCTTGGATATCAATGAGTGGGGAAGATTTGTTGAAAGGGGATAACTTGATGTTTCTTCCTTGTGGACTTCAAGCAGGTTCTTCAATCACTGTGGTGGGGACACCACATTATGCTCATAAGGAGTATGCTCCCCAACTTGCAAAGTTGAGGAACGGTGATGGGTTGGTTTCGGTTTCACAGTTCATGGTTGAATTGCAAGGGCTGAAGTCAGTAGAAGGGGAAGACCCTCCAAAGATTCTTCACTTGAATCCTCGGATAAGGGGGGATTGGAGCAAACGACCAGTTATTGAGCATAATACCTGTTATCGAATGCATTGGGGAACAGCTCAGCGTTGTGATGGTCGGCCATCTGAGGATGATGAAGGAATGCTTGTGGATGGGTATAGACGGTGTGAAAGATGGATGCGGAATGACATTGCTGACTCAAAAGAGTCCAAGACAACATCATGGTTCAAGCGGTTTATAGGGCGTGAGCAGAAGCCAGAAGTGACCTGGCCATTTCCTTTTAATGAGGGTAGAATGTTTGTCCTTACCCTGCGTGCTGGTGTCGATGGCTACCATATTAATGTTGGGGGTCGCCATATGACTTCATTTCCATATCGAACTGGTTTTACACTTGAAGATGCCACAGGATTGGCAGTTAAAGGAGACCTTGATGTTCATTCAATTTTTGCTACCTCTCTCCCTACTTCACACCCAAGTTTCTCACCTCAAAGAGTACTGGAAATGTCAGAGACCTGGAAAGCCAGTCCTCTACCCAAACATGCTGTTCGACTTTTTATTGGAGTTCTTTCTGCTTCAAATCATTTTGCAGAGCGAATGGCAGTTCGAAAAACATGGATGCAAGCAGCTGCAATCAAGTCTTCAGACGTAGTAGTGCGGTTTTTTGTTGCATTGAATCCAAGGAAGGAAGTAAATGCAGTGCTGAGGAAGGAGGCTGCTTACTTTGGTGATATTGTAATTTTGCCCTTTATGGACCGCTATGAGCTTGTTGTGCTTAAAACCACTGCTATCTGTGAGTTTGGGATTCAGAATGTGACTGCTGCATATATCATGAAATGTGATGATGACACTTTTATAAGAGTGGATACTGTCCTGAAGGAAATTGAAGCTGTACCCCGGGAAAAGTCCCTTTATATGGGTAATCTCAATCTCTTGCATCGGCCTCTGAGACATGGCAAATGGGCAGTTACTTATGAGGAGTGGCCAGAAGAAGTATATCCTCCTTACGCCAATGGTCCTGCATACATAATTTCCAAGGATATTGTCACTTTCATCATATCTCAACACAAAGATAGAAAGCTGAGGCTCTTTAAAATGGAAGATGTAAGCATGGGAATGTGGGTTGAGCGATTCAACAATACGGTGACGGCCGTTCAGTACTCCCACAACTGGAAGTTTTGTCAGTACGGATGTATGGATGGCTACTTCACTGCACATTACCAATCTCCAAGGCAGATGGTCTGTCTATGGGACAAGTTGTCGAGGGGTCGGGCGCATTGCTGCAACTTTAGATAA

Protein:

Promoter(3k):

>AM06G005640.1
CTCTTATAAGAAATCTTCTTAGGAGGAACTGAGAGATTAATATTCACCACACTTTGCGTGAAGACAATCAGGTGCTTGTTGCTAGCGGATGCCTTTGGAATCGCTTCTGCGAGAAACTAGTTTAGTTTCTTTTTGTTTCAGTCCTTTTCTTTTTGCATTTGTAACAAAAAAATCTCACTACCTTGTCTCTTTTCTTAATTCTCACGAGAGAGATGATAAAGCAACTATTTTTAAGCGTCTCGTGTAGTTCTCACCTCCCAACAGAGTTTTTCCCACATACAAGACTCAAACTTAAGACTTTGAGATGAAAAGCGAACTCAATTACCGTTGGACTGACTCTTGTTGGTTTATAAAATAACTAGTGCGTATGACCCGTGCGATGCACGGGTATACATTTTCTTGTTGAAAAAACATGAAAAATTAGAGGTAATATATAAGTATATTTTATTTAAATAATTTTATACAAATGAAATAAAATTTAAGGAATTTATAGTTTATATATCTTTGTGAATATACATGTTATATTAGTATTTCAGAAAAATGCAAATAAATTATTATTTGGTAAAGTAAAATATGTGATTTCATTGTATAGACAATAATAATATTCAATTTTAGATATTATGATCAATTTAAAATTATATCACAGAAGAATTTAAACTTCACTTGTCTGATGGATTTCTAATGTGAGATGTATATTTAGAGCTATCTATTTTAGCAGTTTAGTAAAATAAATAGTAATATATGCTTCCAAGTTGAAAATCACATTTCATGTTAAGCATTTTTTTTAAAAACTATTTTATTATACATAAATACATAGATATTGTTTAGATTATTATTAATAAAAATATATTATTTAGCTATATCATTTTATCTAATTTTACTATATGATCAAAAAATAATTACCAATAATCTCTTTAAAAACTATTTTACAGATTTAATTTAAATACTCTAATGGTAATAAAATTAGTATACTAAAAGCCATTGAATTATACATTGACTTCTATAGAAACTATTGACGCTAAAATAATTTGTTATGTGTGATAAAGTGAATGTCGGAAGGAAATTAGCGAGAGGAAGGTTTTTTTTTGTCGTGAAGTGGCGAGCAGAACGTTGGTAGCACTTTTCTTGAAACATATCAACGAACGAACCGAAATAGTGTTAACTACTAAATAAGTTTTTTGGCAAAATTACTCAATAAGACATTGAGGATTTATATGATATTTCATGAAAATAAAAATAAGAGATTTTTGCCCAACATTTAGACCACCTATGGTCATTTTCTGTACTTGGGAAAAAAAGGCACACCAATAGGCACCGCTTGTGGATAATTGATTAGAAACAAGTGAGATATCAAAATATGAAAGGAAAGTGTTATTAAATTAAAAGTTAGGTTCCCAATAGGCTCCCTTTCAATGAAATTATTGTTTATAAAAAAAAACGGTTAAGTATAATTTGTTTGGCATAAATTATAGGTTACTTTGAATATGAATGATTATAGATGAGCAATTAGTGGATATTTGTCGCAAGGTTGAAATGGGAATAATAACGCACAATTAATTTTATAATAGATATAGAAATTTCAGGCGTAATTCCATAGATAGATGTGGCATAATAACGCACAATTAATTTTATGTAATAAATATTCGGGAAAAAAATTTTATTTATTGAAATTACATGTCAGCTAATTACATGTCAAGCTGAATAGTCCACTTAGGATTAATGATATTAGGTGGAGCAATAGGAATCAATGTTTCATTTGTTTCCTTTTCGAGTATATTCGTAAATATATATAGATATAGATTACTTAATTAATACCAACATAATTAATAGCCGACAAATGGGAAAGAGTTTGTAAGAACTTTCAATTATCTAATTTAAATTTTAATTGTAATTTTGGTTTAAATTGTTTTTCTTTATAAAAACAAATATAGAGTATTTTGAAATTAGTCATTGAATTTTCTTTTGGCCAATAACTTCTCTACATTTTTTTAGTCTCAATATTTCTATTTTTACTTTTTAGTCTCAATATCTCTATTTTTTTTAGTCTAAATATTGAGTGCACATGCACACTCATTTTTTGATGTTGAATCACATTTAATCTTTTAAAATAAAATTTAAAATTCAGGAACTGAAAAGATTAGATTTTATTTTAAATGTTAAATCACATTTACTCTTTTTGTGAGGAAATAAATTAATCTGAATATTACAAAACGGAGTGTTTGCGGGGTGAGAGAGCAAATCAAATCCCTCACCGATTAACCATTAAATACAATCGTAGGATGTAGTATAAAAATTCATCAACCATAGAGATTTACTACTTATTGATTCAATCTTAACCACTCATATTATTTTACACCTTATCATATGATCAATAATCAATTTTGGTTTGATTTACTCCATCACGGTAGAAGCAACCTACAAAAAGGGAACACCATTTTTTCAGAGTTTTTTTTGAATTAATTAAAAATCGTTCCATTTTGCGTTCCACAAATTTCAATTCAATTTTGGATTTAATTTTTCCACTCTCCTCTATTTTCAACAAGTTTTCAAGTATTGAGTTACAGGGTGATGAGAAACATACCCATATACTGAAAATCTTCATCTTGTTTTTCTAATGCTTTCATATTTGGATTTGGTTGCTCTCATCTCATCCACCACGATCGAAGAAGATCTATCTGGGCAACACTTCCCTCTTCATCTCCACATCGATCGCAACGCATGCATTAGGGTTCCCTTCATTCAGATGCTACCTTCCACATCCACATGTTGAACAATTTAGGGTTCTACAATGTGTTTTGCCCCCAACTCCTTAAACCATTGCGGTGTTGGTTAATTTCTCTTACCACTTATGCAACTTTAATTCTTTTCATTGTTGCTCAAAACCCCCATTTTCTATTGTCCAATGCATTGGAACTCAAAATTTGTCTTTTTAGGGGAACTGTTGTAGGTATTTTGTTTGTGTTTTTTATTTTATTTTACTGCTTATAGTGTTATTTGAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00337.25	Gal-bind_lectin	200	407	1.40E-49
PF01762.24	Galactosyl_T	455	635	9.10E-33

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT31

Gene Ontology

GO term	Description	Category
GO:0006486	protein glycosylation	Biological Process
GO:0000139	Golgi membrane	Cellular Component
GO:0030246	carbohydrate binding	Molecular Function
GO:0140103	catalytic activity, acting on a glycoprotein	Molecular Function
GO:0008194	UDP-glycosyltransferase activity	Molecular Function

InterPro

InterPro term	Description
IPR002659	Glycosyl transferase, family 31
IPR001079	Galectin, carbohydrate recognition domain
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily

trEMBL

trEMBL term	Description
A0A1S2XA12	_

SwissProt

SwissProt term	Description
B3GTK_ARATH	Hydroxyproline O-galactosyltransferase GALT2

KEGG

KO	Description	Enzyme
K20843	hydroxyproline O-galactosyltransferase 2/3/4/5/6	[EC: 2.4.1.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G21060	Galactosyltransferase family protein
Medicago sativa L.	MsG0280006997.01.T01	_
Oryza sativa L.	LOC_Os08g03670.1	galactosyltransferase family protein, putative, expressed
Cucumis sativus L.	Csa000733	_
Glycyrrhiza uralensis Fisch.	Glyur000189s00009630.1	_
Codonopsis lanceolata	Cl_chr03_22110T	_
Arachis hypogaea L.	AH10G00570.1	Probable beta-1,3-galactosyltransferase 20 like

Expression pattern