| Gene ID | Annotation |
|---|---|
| Am06G005090.1 | Pentatricopeptide repeat (PPR) superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G005090.1 | mRNA | Chr06 | 11889237 | 11891534 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 298 | 342 | 1.80E-72 |
| PF13041.9 | PPR_2 | 328 | 376 | 1.80E-72 |
| PF13041.9 | PPR_2 | 363 | 412 | 1.80E-72 |
| PF13041.9 | PPR_2 | 398 | 436 | 1.80E-72 |
| PF13041.9 | PPR_2 | 433 | 478 | 1.80E-72 |
| PF13041.9 | PPR_2 | 472 | 515 | 1.80E-72 |
| PF13041.9 | PPR_2 | 503 | 551 | 1.80E-72 |
| PF01535.23 | PPR | 402 | 430 | 1.50E-51 |
| PF01535.23 | PPR | 436 | 466 | 1.50E-51 |
| PF12854.10 | PPR_1 | 326 | 356 | 4.80E-41 |
| PF12854.10 | PPR_1 | 394 | 427 | 4.80E-41 |
| PF13812.9 | PPR_3 | 423 | 481 | 3.40E-37 |
| PF13812.9 | PPR_3 | 468 | 515 | 3.40E-37 |
| PF17177.7 | PPR_long | 435 | 568 | 9.90E-21 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0043231 | intracellular membrane-bounded organelle | Cellular Component |
| GO:0010019 | chloroplast-nucleus signaling pathway | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0140053 | mitochondrial gene expression | Biological Process |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A3Q7XIS5 | _ |
| SwissProt term | Description |
|---|---|
| PP382_ARATH | Pentatricopeptide repeat-containing protein At5g14820, mitochondrial |
| KO | Description | Enzyme |
|---|---|---|
| K17710 | pentatricopeptide repeat domain-containing protein 1 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G14820 | Pentatricopeptide repeat (PPR) superfamily protein |
| Medicago sativa L. | MsG0280006930.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g28720.1 | PPR repeat containing protein, expressed |
| Cucumis sativus L. | Csa013897 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000086s00011492.1 | _ |
| Codonopsis lanceolata | Cl_chr06_38370T | _ |
| Arachis hypogaea L. | AH10G01260.1 | Pentatricopeptide repeat-containing protein At3g62470, mitochondrial like |