| Gene ID | Annotation |
|---|---|
| Am06G004810.1 | Ubiquitin C-terminal hydrolases superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G004810.1 | mRNA | Chr06 | 11332669 | 11339158 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00443.32 | UCH | 231 | 562 | 8.30E-39 |
| PF02148.22 | zf-UBP | 130 | 191 | 2.70E-14 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | USP |
| GO term | Description | Category |
|---|---|---|
| GO:0004843 | cysteine-type deubiquitinase activity | Molecular Function |
| GO:0005681 | spliceosomal complex | Cellular Component |
| GO:0016579 | protein deubiquitination | Biological Process |
| GO:0008270 | zinc ion binding | Molecular Function |
| GO:0006508 | proteolysis | Biological Process |
| InterPro term | Description |
|---|---|
| IPR001607 | Zinc finger, UBP-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR033809 | USP39 |
| IPR028889 | Ubiquitin specific protease domain |
| IPR001394 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase |
| IPR038765 | Papain-like cysteine peptidase superfamily |
| trEMBL term | Description |
|---|---|
| A0A371EUJ4 | _ |
| SwissProt term | Description |
|---|---|
| UBP39_MOUSE | Ubiquitin carboxyl-terminal hydrolase 39 |
| KO | Description | Enzyme |
|---|---|---|
| K12847 | U4/U6.U5 tri-snRNP-associated protein 2 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G22285 | Ubiquitin C-terminal hydrolases superfamily protein |
| Medicago sativa L. | MsG0480021837.01.T01 | _ |
| Oryza sativa L. | LOC_Os09g24250.1 | ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed |
| Cucumis sativus L. | Csa006901 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000086s00011516.1 | _ |
| Codonopsis lanceolata | Cl_chr01_45060T | _ |
| Arachis hypogaea L. | AH16G44980.1 | U4/U6.U5 tri-snRNP-associated protein 2 like |