Gene detail

Detail information of Am06G004110.1 Annotation

Gene ID	Annotation
Am06G004110.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G004110.1	mRNA	Chr06	9744219	9750776	+

Sequences

CDS:

>Am06G004110.1
ATGGAAGAACATCATAAAGTGTTTCTTCTTCTGATGCTGCTTCTTTTCCAAGTTCTGCTTGTTGCAGCACAGACAGATAGTCGAGACTTTACTGCTCTATCATCTCTCACACAATCTTGGAAGAACAAACCATTAACTTGGGTGGGTTCAGATCCTTGTGGCAGTAATTGGGACGGAATTCGTTGCACCAATTCAAGAATTACAGAATTGAAACTACCGGGCTTGAATTTGGAGGGTCAGCTGTCTTCAGCAATCCAGGCCTTTCCTGAACTTGATACACTGGATCTTTCTTACAACACAGGATTAACAGGAAGAATTCCAGGAGAAATAGGGAATTTGATAAAGCTGCAATCACTAGCATTGGTTGGTTGTGGTTTCTCTGGTCCTATTCCAGATTCAATTGGATCTTTAAAGCAGCTCACCTTTTTAGCACTGAATTCTAACAAGTTCAATGGAAATATTCCTCGTTCTCTTGGTAATCTAGCAAATATTGATTGGCTAGATCTTGCTGATAACCAGCTCCAAGGCCCTATTCCTGTCTCTGACGGTCAAGGACGACCAGGTTTTGACCTGCTCCTCAAGGCACAACACTTTCATCTGGGGAACAATAACCTCTCGGGTTCAATACCACTACAACTTTTTAACTCCAGCATGATTCTAAAACATGTGCTTTTTGACAGCAATAAACTAACGGGCAGCATTCCTAGCTCACTAAGCTCTGTGAGCACAGTGGAAGTGCTCCGCTTTGATAGGAATCAATTAAACGGGAGAGTGCCTTCCAGCTTGAACAATCTCGAAAAACTTACTGAGCTCTATTTATCTCACAATGACTTCAATGGCTCTTTGCCAGATCTTACTGGAATGAATAGTCTCATCTACGTGGATCTGAGCGACAATAATTTTAATTCTTCTAATGTTCCTTCATGGGTTTCAACTCTGCCTGATCTGACAACAGCGATACTGAAGGACAACCAGCTTAGTGGCACATTAAATCTCAGCAATGGCGGCTTCAGTAGCAGTCTGCAACTCCTTGATTTGCAGAATAATGATATAACCGACCTCGAGCTGGGAAACCAAAACCTTAAATTTGACTTGAGACTGGCTGGAAACAAAATTTGTCTTGAAAATGGAGCAAATCAACAGAGTTACTGCAAAGCACCCCAAATCATTCCCTCATATTCAACACCATCAAATAGTTGTTCACCTCCATCTTGCAGTAACAATCAGATTGCCAGTCCCAACTGTAAATGTGCATTTCCCTATACTGGAAATCTATCATCCAGAGCTTTTAGTTTCTCAAACTACAGTAACACTGGTTACTACAAGGAAATTGAACAGACTCTGCTGGATACTTTTCGAAAACAAAAAATTCCAGTGGATTCAGTTTCTCTTAGTAATCCCATCAAGAGTTCATCTACTGATAATTTCCAGTTGACTCTGGATATCTTCCCATCTCAAACCGATCGTTTCAATACAGCTGGAGTTTTAGCTGCTGCTTTTGTGCTTAGCAACCAGATTTACAAACCTCCAGAGTTTTTCTCCCCTTACTTCTTCATTGGTGTTAATTATGAATACTACGGAGGAGAACCTAAAGGATCAAAATCAAATACAGGGGTTATAGTTGGTGCAGCTCTTGCTGTATTAGTCTTTCTTGTACTGGCAGTCCTTGCAGGGATGTACGCCATTCGACAAAACAGAAGAGCAAGAGGATCTTCGGAGTTGAACCCTTTTGTAAACTGGGAACAGAACGTGAACAGTGGGGCTGCTCCTCAGTTGAAAGGAGCACGATGGTTTTCTTTTGAAGAGCTAAGGAAATACACTAACAATTTCACAGAAACTAACACTGTTGGATCAGGGGGCTATGGAAAGGTTTACCAAGGTGTTCTCCCTGCGGGGGAATTGGTTGCTGTCAAACGGGCTGGAAAAGAGTCTATGCAGGGTGCTGTTGAGTTTAAAACTGAGATTGAACTTTTATCAAGGGTCCATCATAAGAATCTCGTTGATCTTGTGGGTTTTTGTTACGAGAAAGGTGAACAAATGCTGGTCTATGAGTACATTGCAAATGGCACTGTAATGGATAGTCTTTCAGGAAAGTCTGGGATCTGGATGGATTGGATAAGGAGGCTGAAAGTTGCATTGGGTGCTGCTAGAGGTCTCACCTATCTGCATGAACTTGCTAACCCACCAATCATACACAGAGACATAAAATCAAGCAATATCCTACTTGATAATCACCTCAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAACTTCTTGTTGATGGTGATAGGGGGCATGTCACTACTCAAGTTAAAGGCACAATGGGATATTTGGATCCTGAATATTACATGACCCAGCAGTTGACTGAAAAAAGTGATGTATATAGCTTTGGTGTGCTAATGCTGGAACTAGTAACAGCAAGAAGGCCAATAGAGCAAGGAAAATACATTGTAAGAGAGGTAATGAGGGTAATGGATACATCAAAAGATTTATACAATCTTCATTCCATTTTAGATCCAACTATAATCAAAGCGACAAAACCAAAAGGTTTAGAAAGGTTTGTGGAACTGGCATTGAGGTGTGTCAAAGAATATGCAGCCGAGAGACCTACAATGGCCGACGTTGCAAAAGAGATAGAGAGCATAATCGAGCTCGCTGGAGTGAACCCCAATTCCGAATCAGCCTCAACAACAGAAACTTATGAGGAAGCCGGAGGGGAGAATGTCCAACATCCTTATGTCAACAACGATGAGTTTGACTACAGTGGAATTTTTCCAACAATTAAGGTAGAACCTCAATGA

Protein:

Promoter(3k):

>AM06G004110.1
TTCATATCCCAAAGTTCAGCCCAAATTGCCTTACTTGATCCCACTTTGTCACTTAGTTCTTTCACCCAATGGCCATGCAAGTCTTTAATCAAAGCACATGTCGCACTTCTTGAAGAAGATGCGAAAGATCCATCAACATTGATTTTATAACGCCATGATAGTAAACAATTTAAAATAAATTAAAGTATTAAAAGTGACATTGGTTTTAAAATAACTAATAATTACATACATATAAATATAGTTTTGTTTGGTAAAATATAAATTACTATATGTTTATTAATTAATTTTTTCATAAATTTTAAATTTTGTATAGTAAAATATAAATTATTATATTTTTAGCTATAATCCTACATAAAGAATTGAAATCATTTTATTTTCCGATAAAATCAGTTTGCTTTGTTGGGGGGTCGACTGATCTTAGTTTTAGGCCTAAAATAAATTTTAAAGTGAGGCTTTTATAAAATTAATAACAAATTATTTTGCATGAAGGAGAATAATAAAAAATAATTAGCATCTTAAAAAAAATGTGAGTTGTGCTAAAACATGAATTGAACCATATTTTTCTAAGAAAAAATTATTTATTGTAATATTATTTACTTATTAATGAATTATTTTTAAAAATTGGGCCTCCTTAGGGTCATCCCTGCTTTCTTGTGAAATTAAAAAATATTTTTTACGAGAACACGACCTAACGGTAAAACACAACAAGTGGTGTGTAGACAGACACTCAAAACGCTGCGTTCGAACATGCAACGTTCTACTCATCCCTACTCTGAGGAAAAAAAATAAAAGGTGAATATTCCATTATTAAAAAAAGGCTAAATTGCTGTTTTGACCCTTTATCTTTGGGGTTGCTGTCACTTTGGTCATTTATCTTTTTTTTTCTCTTTTTAGCCCCTCATGTTTTTTTTTGTGTGTCATTTTGGTCCCTGCCGTTAGTTTTTCTAACGGACGCCACGCTGGCAGTTAACTGCTGACGTGGCGTCCTAATTGTCAAATCTGACGTGTCTTCATTAAATGACATGGCCAATGAGGGACCAAATTGAAACAAATTAAAAACATAGGGGACCAAATTGACACAAACACAAAACATAATCAATCACTATTCATCTTCTTCCTCCATCTTCATCTCTTCTTCTCCGGCGAGCCACCACCACCAGAAGCGGCGGAGATGACCTCCGACATGGTGGTCGCCGGTGGAAGGTACTCCAATGACAAAAAAATTAGGGCTTTTTGAGAGGATGACGCGACGATTCTGAATATCAAATTCGTTTTTTGATTGAAGGTCCATGGAAACACAGATCTGTCAAAAACGAAAAGGAACGAAGGAACGAAAATGAACGAATTGGTGGAGAGATTGCAACAAAGGAACGAAAACGAAAAAGAGCGAATTGCAACAAAGGAACGAAAACGAAAAGGAAACGAATTGCAACACAGATCTGAAACTTATTCTTCCAGATCTGTTTCTTGGTGGAGAGATGCGCAGAGAGAAGGAGAGGAAAAGAAGGAAAAATGTGAGAGGGAGAGTGAGAGAGATGCGACGGTGATAGTGAGATGGTGGTCGTTTGGGGTTTTGGGGGTGGTCGCCGTTTGGTAGGAGGGTGGTGACGGTGGTGATGGTTGCTGTTACGGTGGTGCTAGTGAAGAAGAAGAAAGATCTGTTTTTTTATTTATTTTGATGTTTTTAAGTTTTTGTGTCAGTTTGGACCCCTATGTTTTTAATTTGTTTCAATTTGGTCCCTCAAAGACACGTTAGATTGGACAATTTGGACGCCACGTCAGCAGTTAACTGTCAGCGTGGCGTCTGTTAGAAAAATCTAACGGCAGGGGCCAAAATGACACACAAAAAAAACATGAGGGCCTAAAACGAGAAAATAAAAAGATAAAGGGCCAAAGTGACAGCAACCCCAAAGATAAAGGGCCAAAACAGCAATTTAGCCTAAAAAAAAAATGAATCTTGTTTCTTTGTTCTTGTCTCCCTCAAATCCACTTCGGTTGCCGCTCCAACTTGTTACTCCTCAAATATACAAAGTAAGATCCAAAGATGCTTAAAGCCTGTCCAAACAGCTATACAATTGCTCAAGCTTTGAATATCTCAAAAACCAATTCTCTCTCTCTATTCATTCCATTCGATGCATTCCTCTTTGACAGTTGTGCATAACACCCGTCTTTGATTGAGACTAACTTCTTTGTAATATTTGACACTAACTTATTCGTATTAGAATATCTGAGGTGGATCATAGTAAATAATAATTATAATTACTGTTATTTTATTATTGTGTCATCACCATCATAATCTGTTCGGACGGCAAAGCTAGGTGGTGAAATTGTCTAATTCTATAATTTTAATTTTGTCTTGGTATAAACAGCACAATGCAAAAGTTTAAAAATGAAACCAATACACTGTTCACTGATCATGACAACCTACTAACATCATTATTATGCTTATAATTATATTATATTATATATTCCCTCCTTAAAAAACGAGAGTGAAAATGTCGCTTGTTAATTTCACCTTGTGTGAACAAGAACAACTACCACTTTTTAAATATTGATAAAAATGTGCTGATAAAAGACAGCAAATTAAAACAGATACTTTCAAGGTAGTTGTTGATTCCAAGTTTTTTCTTGTTTCAAATGTTTGAATGAAAAGGTAAACGAGGGAAATTATATGATTATGATTAGTGGCCATGTTGTGACAATATATTTTTATTTATGGAGTTAATACCCATTCTAGCTTTTGCCGTCCGAACAGATTATGATGGTGATGACACAATAATAAAGGCATTGACTTAGTAAGAGGCATTAGTTATAGACGCGTCTGCTTTACTAACCTTTGTTTGTTGATTCAGTTTTTTTTTTTGAATATTACAGAAGCTTTGTTATGTTTCCTCATTAAAAGTTTATAGATTTCTCCGCTTTGATTGTTTGGTGATCCTTCTCCTAAGCTTGAATATTTGGTTCTCAATTCAACATCAGAAAAATCTTAAGAGAGTAATA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	611	877	6.50E-47
PF07714.20	PK_Tyr_Ser-Thr	613	878	1.80E-44

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.3.2:RLK-Pelle_LRR-VIII-1

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0004888	transmembrane signaling receptor activity	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A1S2XCI6	_

SwissProt

SwissProt term	Description
HPCA1_ARATH	Leucine-rich repeat receptor protein kinase HPCA1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G49760	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0280006790.01.T01	_
Oryza sativa L.	LOC_Os12g10740.1	leucine-rich repeat family protein, putative, expressed
Cucumis sativus L.	Csa004854	_
Glycyrrhiza uralensis Fisch.	Glyur000071s00005262.1	_
Codonopsis lanceolata	Cl_chr03_22120T	_
Arachis hypogaea L.	AH20G07290.1	Probable leucine-rich repeat receptor-like protein kinase At5g49770 like

Expression pattern