| Gene ID | Annotation |
|---|---|
| Am06G003540.1 | RING membrane-anchor 1 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G003540.1 | mRNA | Chr06 | 7901068 | 7903262 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00097.28 | zf-C3HC4 | 30 | 76 | 4.60E-09 |
| PF15227.9 | zf-C3HC4_4 | 30 | 76 | 3.80E-08 |
| PF13445.9 | zf-RING_UBOX | 30 | 57 | 1.20E-07 |
| PF13639.9 | zf-RING_2 | 29 | 77 | 2.10E-07 |
| PF13923.9 | zf-C3HC4_2 | 30 | 76 | 2.50E-07 |
| PF13920.9 | zf-C3HC4_3 | 29 | 82 | 9.90E-07 |
| PF14634.9 | zf-RING_5 | 30 | 77 | 2.50E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0016567 | protein ubiquitination | Biological Process |
| GO:0044390 | ubiquitin-like protein conjugating enzyme binding | Molecular Function |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0036503 | ERAD pathway | Biological Process |
| GO:0016874 | ligase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR017907 | Zinc finger, RING-type, conserved site |
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR018957 | Zinc finger, C3HC4 RING-type |
| IPR045103 | E3 ubiquitin-protein ligase RNF5/RNF185-like |
| trEMBL term | Description |
|---|---|
| A0AAN9QAM0 | _ |
| SwissProt term | Description |
|---|---|
| RMA1_CAPAN | E3 ubiquitin-protein ligase RMA1H1 |
| KO | Description | Enzyme |
|---|---|---|
| K10666 | E3 ubiquitin-protein ligase RNF5/185 | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT4G03510 | RING membrane-anchor 1 |
| Medicago sativa L. | MsG0480022396.01.T01 | _ |
| Oryza sativa L. | LOC_Os04g44820.1 | zinc finger, C3HC4 type domain containing protein, expressed |
| Cucumis sativus L. | Csa016240 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000056s00004138.1 | _ |
| Codonopsis lanceolata | Cl_chr03_02710T | _ |
| Arachis hypogaea L. | AH20G06610.1 | E3 ubiquitin-protein ligase RMA1H1 like |