| Gene ID | Annotation |
|---|---|
| Am06G003330.1 | lysyl-tRNA synthetase 1 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G003330.1 | mRNA | Chr06 | 7545391 | 7557597 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00152.23 | tRNA-synt_2 | 241 | 573 | 2.40E-75 |
| PF01336.28 | tRNA_anti-codon | 119 | 193 | 1.20E-12 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0005829 | cytosol | Cellular Component |
| GO:0016020 | membrane | Cellular Component |
| GO:0000049 | tRNA binding | Molecular Function |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0003677 | DNA binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR018149 | Lysyl-tRNA synthetase, class II, C-terminal |
| IPR044136 | Lysine-tRNA ligase, class II, N-terminal |
| IPR002313 | Lysine-tRNA ligase, class II |
| IPR045864 | Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) |
| IPR034762 | Bacterial/eukaryotic lysine-tRNA ligase, class II |
| IPR004364 | Aminoacyl-tRNA synthetase, class II (D/K/N) |
| IPR006195 | Aminoacyl-tRNA synthetase, class II |
| trEMBL term | Description |
|---|---|
| A0AAN9L7S1 | _ |
| SwissProt term | Description |
|---|---|
| SYKC_ARATH | Lysine--tRNA ligase, cytoplasmic |
| KO | Description | Enzyme |
|---|---|---|
| K04567 | lysyl-tRNA synthetase, class II | [EC: 6.1.1.6] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G11710 | lysyl-tRNA synthetase 1 |
| Medicago sativa L. | MsG0280008224.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g38980.1 | tRNA synthetases class II domain containing protein, expressed |
| Cucumis sativus L. | Csa018474 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000059s00006338.1 | _ |
| Codonopsis lanceolata | Cl_chr08_21640T | _ |
| Arachis hypogaea L. | AH01G22460.1 | Lysine--tRNA ligase, cytoplasmic like |