Gene detail

Detail information of Am06G003150.1 Annotation

Gene ID	Annotation
Am06G003150.1	cellulose synthase-like D3

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G003150.1	mRNA	Chr06	7176891	7181486	-

Sequences

CDS:

>Am06G003150.1
ATGGCATCGAGATCATTCAAGGCAAGCAGGTTATCGATGTCGTCAATTTCTTCTGATGCAACTGACGACCAGAAGCCTCCTTTACCTCCAAATGTGACATTTGCTCAAAGAACATCCTCGGGTCGATACATCAATTACTCAAGAGATGATCTTGACAGTGAGCTAGGAAGTAATGACTTCATGAATATGAATTATACTGGGCATTTACCACCAACTCCTGATAACCAACCTATGGACTTAACAATCTCACAGAAAGTTGAGGAGCAATATGTGTCGAGTTCGCTATTCACTGGTGGATTCAACAGCACTACTAGAGCTCATTTAATGGATAAGGTCGCAGACTCTGAAGCAAACCATCCACAGATGGCAGGTGCAAAAGGATCTTCATGTGCAATTCCTGGTTGTGATTCTAAGGTGATGAGTGATGAACGTGGCAAGGATCTTGTTCCTTGTGAGTGTGATTATAAGATATGTAGAGACTGCTATATAGATGCGGTTAAAACAGGAGACGGAATGTGTCCAGGATGTAAAGAACCGTATAAGAACACTGAGCTTGATGAAGAGGCTGTGGAGGATGGAAGGCCACTTCCACCTCCTCCACCAAGTGGGATGTCGAAAATGGAAAGGAGATTGTCGATGATTAAGTCTACAAAGTCAGCACTGATGAGAAGTCAAACTGGAGATTTTGATCATAATAGGTGGCTGTTTGAGACAAAAGCTACCTATGGCTATGGAAATGCTATATGGCCTAAAGAAGGGAATTTTGGAAATGGAAAAGATGATGATGTTTCTGAGCCGGCTGAGTTGATGAGCAGACCTTGGAGGCCGCTTACACGGAAGCTGAAGATACCTGCTGCTATTCTGAGTCCATATCGTCTCCTTATCTTAATCCGTTTGGTTGCCTTGGTACTGTTCCTTGCATGGAGGGTCAAGCACAAAAACACTGATGCAATATGGCTATGGGCCATGTCAGTGGTTTGTGAAATATGGTTTGCTTTTTCTTGGATTCTGGATCAATTGCCAAAGCTATGCCCAATTAATCGTTCCACCGATCTTAACGTTCTGAAGGAAAAATTTGAAACACCAAGTCCTGAAAATCCTACAGGAAAATCTGATCTACCAGGCATAGATATCTTTGTCTCTACTGCTGATCCTGAGAAAGAACCACCTCTTGTTACTGCAAACACTATATTGTCTATTTTAGCTGCTGATTATCCAGTTGAGAAGCTTGCTTGCTATGTTTCTGATGATGGTGGTGCACTTTTAACTTTTGAAGCAATGGCTGAAGCTGCTAGCTTTGCTCATGTGTGGGTTCCGTTCTGTCGTAAACATGATATTGAGCCTAGGAATCCTGAATCATATTTCAGCTTAAAGAGAGATCCTTATAAAAATAAAGTGAAATCAGGTTTTGTGAAAGATCGTAGAAGGATCAAGCGTGAGTATGATGAGTTTAAAGTTAGGATCAATGGTTTGCCTGAATCTATTCGTCGTAGATCGGATGCCTTTCATGCTAGAGAGGAAATTAAGGCCATGAAACTGCAGAGACAAAACAAGGAAGATGAACATATTGAACCTGTAAAGATTCCAAAAGCAACATGGATGGCAGATGGATCTCATTGGCCAGGAACTTGGTTGAACACTTCAGCTGAGCACTCTAGGGGTGACCATGCTGGTATAATTCAGGTGATGTTGAAACCTCCAAGCGACGAACCTCTTCTAGGAACGGCTGCTGATGATGCAAAGCTTATTGATGTGACTGATCTTGATATCCGACTTCCACTTCTTGTTTATGTTTCAAGAGAGAAACGTCCAGGCTATGACCACAACAAAAAAGCCGGTGCCATGAATGCCTTGGTCAGAGCCTCAGCCATCATGTCCAACGGTCCTTTTATCCTCAATCTCGACTGTGACCATTATATATACAACTCAAAGGCAATGAGGGAAGGTATGTGTTTTATGATGGACCGTGGTGGTGACCGCATTTGCTATGTCCAATTCCCACAGAGGTTTGAGGGAATTGACCCCTCTGATCGATACGCTAATCACAACACTGTCTTCTTTGATGTTAACATGAGAGCTCTTGATGGACTTCAAGGGCCAGTCTATGTAGGAACTGGCTGTCTATTTAGAAGGGTTGCCCTTTACGGCTTTGACCCTCCCCGCTCCAAAGAACACAGCTCAGGTTTCCTAGGTTGCTGCTTTGGTCGTCAAAAGAAGAATGCTCACACCTCAGAAGAAAACCGGGCACTAAGAATGGGTGACTCAGATGAGGAAGAAGAAATGAATCTATCATTGTACCCTAAAAAGTTTGGAAACTCAAATATCCTTATTGACTCAATCCCTGTAGCAGAGATCCAAGGTAGACCACTTGCTGATCACCCAGCTGTGAAAAATGGACGCCCTCCCGGTGCTCTCACCATGCCACGCGACCTTCTCGATGTATCAACTGTGGCAGAAGCTATCAGTGTTATCTCATGTTGGTATGAAGACAAAACTGAGTGGGGACAGCGTGTTGGATGGATCTACGGATCAGTTACTGAGGATGTTGTCACTGGTTATAGGATGCACAATCGAGGTTGGAAATCAGTTTATTGTGTGACCAAACGTGACGCCTTCCGTGGAACAGCTCCCATAAATCTCACTGATAGGCTTCATCAGGTTCTTAGATGGGCTACTGGCTCAGTTGAGATATTCTTCTCAAGAAACAATGCTATGTTAGCTAGTCCAAGAATGAAGTTTCTTCAAAGGATAGCATACCTCAATGTTGGAATTTATCCATTCACGTCCTTTTTTCTCATTGTCTATTGCTTCCTTCCTGCACTCTCACTCTTCTCAGGCCAATTCATTGTTCAAACACTGAATGTCACTTTTCTCGCGTACCTCTTAGCCATTACCGTGACTTTATGCATGCTTGCTGTTCTCGAGATTAAGTGGTCTGGAATCGAACTTGAAGAATGGTGGAGGAATGAACAGTTTTGGTTAATTGGAGGAACAAGTGCACATCTAGCTGCTGTACTTCAAGGTTTACTTAAAGTGATAGCAGGCATTGAAATCTCTTTCACTTTAACTTCAAAATCTGGCGGTGATGATGTCGATGACGAGTTTGCTGATCTTTATATTGTTAAATGGTCATCACTTATGATACTACCAATTACTCTCATGATGGTGAATTTAATAGCAATAGCTGTTGGAGTTAGCAGAACCATATACAGTACTATACCGCAATGGAGCCGTTTACTAGGTGGTGTTTTTTTCAGCTTTTGGGTTTTGACACATTTATATCCTTTTGCTAAAGGTTTGATGGGAAGAAGAGGAAGGACACCTACCATTGTTTTTGTATGGTCAGGTCTCATAGCTATCATCATATCACTCCTTTGGGTTTCAATCAATCCCCCATCTGGTACCAACCAAATTGGTGGTTCATTTCAGTTTCCATGA

Protein:

>Am06G003150.1
MASRSFKASRLSMSSISSDATDDQKPPLPPNVTFAQRTSSGRYINYSRDDLDSELGSNDFMNMNYTGHLPPTPDNQPMDLTISQKVEEQYVSSSLFTGGFNSTTRAHLMDKVADSEANHPQMAGAKGSSCAIPGCDSKVMSDERGKDLVPCECDYKICRDCYIDAVKTGDGMCPGCKEPYKNTELDEEAVEDGRPLPPPPPSGMSKMERRLSMIKSTKSALMRSQTGDFDHNRWLFETKATYGYGNAIWPKEGNFGNGKDDDVSEPAELMSRPWRPLTRKLKIPAAILSPYRLLILIRLVALVLFLAWRVKHKNTDAIWLWAMSVVCEIWFAFSWILDQLPKLCPINRSTDLNVLKEKFETPSPENPTGKSDLPGIDIFVSTADPEKEPPLVTANTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFAHVWVPFCRKHDIEPRNPESYFSLKRDPYKNKVKSGFVKDRRRIKREYDEFKVRINGLPESIRRRSDAFHAREEIKAMKLQRQNKEDEHIEPVKIPKATWMADGSHWPGTWLNTSAEHSRGDHAGIIQVMLKPPSDEPLLGTAADDAKLIDVTDLDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRSKEHSSGFLGCCFGRQKKNAHTSEENRALRMGDSDEEEEMNLSLYPKKFGNSNILIDSIPVAEIQGRPLADHPAVKNGRPPGALTMPRDLLDVSTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAMLASPRMKFLQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIVQTLNVTFLAYLLAITVTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWSSLMILPITLMMVNLIAIAVGVSRTIYSTIPQWSRLLGGVFFSFWVLTHLYPFAKGLMGRRGRTPTIVFVWSGLIAIIISLLWVSINPPSGTNQIGGSFQFP*

Promoter(3k):

>AM06G003150.1
TAGCGACCGATTTAGCATCCGATTTTGTAGCAACATTTTTTGGCGATCGAGTATAGACACTGATTTTGTGACTGTAATTAGCGACTAATTTAGTGATTCATTTAGCAACTGATTTTGTGACTGAAATTTGTGAAATTAGTCTCATCAAAACAAGATTATTTATGCTTTAACTTTTACTTTTATGTAATACTTAAAAGATAGGTTTTCAAATTGGTAGGAGCATATACCAAAATACCCTTGAGATTGGGACCATCACTAACAGGATTTTTTATATATTTGCAGTGACCAAATGTACCTTTAAGCCAAAAAAATAAAACAAAAGGGTAACTTTCATATATATATATATATATATATATTATATATATGTTATTGATGAAAAATAATATAACTTTATTTCCAAAGATTCTCAACAATCGGTAGAAGGAAATTCCTAATGTGACTTGTGAGTAATAGATGTATTTTTCAAATCATACCAGCAAACCAAAGTATAGCACTTAAAAAAAGGATAAATAGCGACCGATATTAGAATAAATCGGTCGCTAATTAGGAAAAATCAGTCACTAAATCAATTTGCGATCATAAAAAATCAGTTGCTAAATCACTGGTTGCTTACCAGTAGCAACCGATTTAGCGTCCGATTTTGTAGCAACATTTTTTGGCGATCGAGTATAGACACTTATTTTGTGACTGTAATTAGCGACTAATTTAGTGATTCATTTAGCAACTGATTTTGTGACTGAAATTTGCGAAATTAGTCTCATCAAAACAAGATTATTTATGCTTTAACTTTTACTTTTATGTAATACTTAAAAGATAGGTTTTCAAATTGGTAGGAGCATATACCAAAATACCCTTGAGATTGATATGAAGGGAAAGATCTTTATTATAATCAACGATAAGTTCTGCCAACTCCGGTACATAATGTCCTAAAAAGAAAAGTTTCATGATCAAATCATAGGACTCAAAACACTAATTTTGTAGGAAAGTGTAAGAATCATTAGCTGTTTCACTACCTGCATAGCTCTCCCCTACTATATAAAATTCTTGAGTTCTATATGATGGATACTTGAGGAACCAATTCAGCCAAATTAGTGGTTAAACCTGAGACTCAGAAAGCTAATTTCAAATTGGACATTTGGACCAATAACCATGTGAGTGTCACACTTCCACATTTAATTGTCACTCACGTTTCCAAATTTAAAATTTAATTTCCATGCATTTTCTTTGTCATTTTCAATGTAAACTCTTTTGAATTTTGCTGTCATTTTCCATGTAAATTCAAAATCAATTGACTAAGTCGTATGAAATGCTAAAAGTGACGATCAAGGGAGTCAAACCCATGACATAGGAGAATATAATTTACAAACAGAACCACCTGCGTATTTTGTATTTGACATATACACAGACAATTAAACAAATAAACCGAACTCTTCTTTATTTGGTACAAGAATATACATGTGTTTTATGCATAGATAATATGTAAAAATAAATAAAAAAATACATATAGGGCCTTTTTATATTTTCTAAAGAATTTTTTTTATTTGACCCAATGAGCCAGTACTCTGATTAAGTCGACCACCAAACCGATTTTTAAACCATCTGGATGTGTGAGATTGGGGATTCTGATAAACAGGAGTGCCATAAACATATATTTTCTTATATGAAAAGAAATAGATTAGTAGATATCTAGTTTTAACCACTAATAACACATATTTGCTCTTCCATTAGTTTCATTCACAGTGATATATCCTGCATAGTGCTGAAAATCAACAGAAGGTTGTTGGCCAGGTAAATTAGTCACAAGATCACCATTATCCCCAGAGCTCGTCAATTTCCTCCCACCATCCCATTGCCTATCTCTAGAAGAAACAACAGGATTCAGAGAGATAAACAACACTACAAAACCCAATATGCAGCAACTTGTCATGGTAATGTGGACTATCGGTGTGTTTGGATTAGAAGAGAAAGAGGAAAATGAGAAAGAGAAGAGAGAGAGTGAGGGAAGAGATGAAGAGGTGAGAAAAAAACTCCACATCTGTCATAGCACTCACTCCACATCTCTTTCATCACTTTTAAACACATTTTCTTCTCATGACAGATCTCAAACTCACTACCATTTAGCTCTTCAAAGCTCAAACAACAAATCGGTACGTAATTATATGCTTCGTTATTTTTATTTGTCTGTTTTTGCATTATCAAGGGGTATTTTTATTTTATTTTTAGTAAAGGTATTAACATTTTGTTATAGTGATGGATTTCTTGCATATATAACGGGCTAATTGATTTCATTGATTACCGAAAATAAAGGCGATAAACGTGAAATATTGGAATTGGACAAGATATTTTTATTACTATATATTTGATTTCTTTTTCTTTTTTTTTTCTTATGATTTTGAAGCAACGAAAGGAAGTCAAAGAGGAGTTTTTTGCTTTTCAACTTTGATTCAACAGGTGCTTCGTTTTTCTTCTTCTGCTTTTGTTTTTACCAAGAGTCATTTAACAAGGATTGAACTTTTTTATTAGCTTATTATGGTCCTACTGTGAGTTCTTGAAGTTGGTTTTGTTGCTCAGAAATTGTAAGATTGGGAAAAAAAGAGAGGTTTGGATCTTGTACTATCCCTTAGTTGTGTTTTTTTGCATCTGTGTTCTTTTGATTCAGTCCTTTTGAAGTTCAGATGATTTGTGATTCTTTTTTTGGTTTCATTGATTTCTATGTTTTTTCTGCAACTCTGTTGACATTTTTTGTAAATTCATCAAAACGTCACTTAGATCTAGTGATTTTCTGTGTGCATCTGCCAGAAAGGTGTAGAGGATTCACTAGTTACATTTTGATTTTAGATGATTGAACTTTTCACAACATTTTATTGTACTTTTAAGTTAACTTTATGCTACAGTTTGTTTCTGATAAGGTGAGTTAATTACAATGATGATGTAGATCTGATGTGCTGAAGTTTTGAATTTCAGGTTATTAGGATTTAGGATTAATCTTTGTCCTCAAAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03552.17	Cellulose_synt	376	1136	0
PF14570.9	zf-RING_4	132	181	1.90E-17
PF13632.9	Glyco_trans_2_3	836	963	1.60E-06

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT2

Gene Ontology

GO term	Description	Category
GO:0005886	plasma membrane	Cellular Component
GO:0009833	plant-type primary cell wall biogenesis	Biological Process
GO:0051753	mannan synthase activity	Molecular Function
GO:0047517	1,4-beta-D-xylan synthase activity	Molecular Function
GO:0016746	acyltransferase activity	Molecular Function

InterPro

InterPro term	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR029044	Nucleotide-diphospho-sugar transferases
IPR005150	Cellulose synthase

trEMBL

trEMBL term	Description
A0A2Z6NI16	_

SwissProt

SwissProt term	Description
CSLD3_ARATH	Cellulose synthase-like protein D3

KEGG

KO	Description	Enzyme
K20924	cellulose synthase-like protein	[EC: 2.4.1.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G03050	cellulose synthase-like D3
Medicago sativa L.	MsG0780041693.01.T01	_
Oryza sativa L.	LOC_Os06g02180.1	CSLD2 - cellulose synthase-like family D, expressed
Cucumis sativus L.	Csa018156	_
Glycyrrhiza uralensis Fisch.	Glyur000382s00020375.3	_
Codonopsis lanceolata	Cl_chr02_07660T	_
Arachis hypogaea L.	AH05G15230.2	Cellulose synthase-like protein D3 like

Expression pattern