Gene detail

Detail information of Am06G000540.1 Annotation

Gene ID	Annotation
Am06G000540.1	2Fe-2S ferredoxin-like superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G000540.1	mRNA	Chr06	1330170	1331160	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM06G000540.1
CTTATGACGTCAATTCTTGGTCATCACTTCAACATTTCCAGGAAAGAGATGTTAGTGAGGAATCTGGCTGGAAACTTGTGCATGGTGATGTTTTTCGGCCTCCTCGCAATCTGGTTCTTCTTTCTGCTGTTGTTGGTACAGGTGCTCAGTTTGCATTGTTGGTTCTTCTTGTCATCTTGTTGGCTATTGTTGGGATGTTGTATGTGGGGTAAGTGCATAACCTTAAACTAACTATCATGATATTCTGAATAATGATTTTATCAGTGATATGAACTTAATGCTGTAGCACACGTTATCTTATACGTCTTAGCCATCAGGAATGATCCAATGCTCTAATTTTCCTATTGAATGTATTTTATTTGTAATCTCCTCCCTTCAATGTTATGTAAGTTTTCTTTAATTGCAGACGAGGAGCCATTGTCACGACTTTCATTGTATGTTACGCTCTCACGTCATTCATTTCTGGCTATGTAAGTGGGGGGATGTACTCACGTAATGGGGGTAAGACTCTACATTGAACTTTTCTGCATGCCCCTCTCTCTCTCTCTCTCTGAATGACTATAACTTTGCTTATCATTTTTAGGTAAAAGTTGGATTAAATCCATGATCCTTACAGCATCGCTGTTCCCATTCATGTGCTTTGGAATTGGATTAGCCTTAAACACAATTGCTATATTCTATGGATCTCTAGCAGCAATCCCCTTTGGTACAATGGTGGTTGTCTTTGTTATTTGGGCTTTTATCTCTTTCCCTCTAGCACTTCTTGGCACAGTTGTTGGAAGAAACTGGAGTGGTGCTCCAAATAATCCCTGTCGCGTAAAGACCATTCCTCGTCCCATTCCTGAGAAGAAGTGGTACCTCACACCCTCTGTAGTTTCTCTGATGGGAGGACTGCTTCCCTTCGGCAGCATATTCATCGAGATGTATTTCGTTTTTACTTCCTTCTGGAATTACAAGGTGAATAACAATGCAATGACTTGTTTGGAGAGAAAATTAGTTTTTTTATTCTTTTTAGTTGCATTTGATAAAAGCAGTAAATAATGATTTCTCATGGACATATTTTTATACAAAGATGTTTTTAAGTAGTAACACTTATATTTCTATGAAAGCTGAATAAACACATGCAGTATTGTCTTACATGTTATTCTCTCTTCTTTTTCATTCCACTTTGTCAAACAGGTGTACTACGTCTATGGCTTCATGCTACTGGTTTTTCTGATTCTTATGGTTGTTACCGTGTGTGTGACAATTGTGGGGACATACTTTTTGTTAAATGCTGAGAACTACCACTGGCAATGGACTTCTTTCTTTTCAGCTGCCTCAACATCTGTTTATGTGTATTTGTACTCAATATACTACTACTATGTGAAGACAAAGATGTCAGGCTTCTTCCAAACTAGCTTCTATTTTGGATACACTTTGATGTTTTGTCTTGGACTGGGAATTCTCTGTGGTAAGTCTTCAGTTTAATTTCAATCTCTTTTAGGATAATGTGTTTACTCTGCTGAAGTGAAATGGGATACCTTAATCACATGCTGAATACCTTTTAATATATCTTTGTTTGTTCTTGTCACCTTAATTTCAATTAAATTTTATCTTCAAAATGTGCAGGAGCCGTGGGTCATCTTGGTTCGAATTTGTTTGTGAGGAGGATCTACAGAAATATCAAGTGTGACTAAGGTTATTCTGTTTGTCGAGACCAAAGCAATTCCATATGTTGCCAGATACAGTAAATTCTTGGAGGGAGCCTTTGGTTATATATGTGGAGACCAAGCAATGATTATAGGTAGAATCACAGGGTTTTGAGGATAGCAATTTATTCTTTCTTTATATTAGGGAAGCCCTGGGAATGGGATTTTATGCCGTGGCTGTAATTGAAAGCCTCGATTTAGAATGCATGGATTTGTCTTATAGTTCAGATAGCTAGCAAAATATTAGACTCTTATGGTCACTTTTTATTTCTTTTACAAATAGGTGCCTGATTGACAGACTGATGTCTGATTCCCCTGCACGGTTTATCTATTGAACTTAGTGGGGATGAAGTCTCGGTAATGAATTTTGTATCAAATATCTAAATATCCATTCTAACTACTCCCTCAACATTCCTCAATCTTTAAATTTTAAATCATTTTTGCCTTCTAATAATATTTTAGTATCCAAATATGCTCAGTACTTCTTCATGACTGGTTGTAATTCTAGACGCAATTTTAGCCCAGAATAAATGCGAGTAGATAAACAATTTGTGTTGCTGCCTGCTCAGCTTCTTAACCATGCTGTTTAGGTCATTTTCAGCTATTCTTTTTTGGAGGTTTTCGTAGAACATGATGGGGTCTATAGATGCCACACTGCACGGATAAACATTCAATGGTCTAGCTGCTAAAGCATATTGCCCCTTTCCCATTTCGAGGTTCAAAAGTTTTAACCAATTACTGCTTGTGTTGTTACTGTTGTGTGCATAAGTGCTTGGAAGTCTTTACTAGTTAAGACGTAGTTGCTACGATTGTGGCTCAAATGTGTTCGTAATTTCCTGCCAGTAACCAAATTGAAAATTTGAAAACTAATTTTATAGACAGATATCTTGGTATGTGACTGTACCATCTTATCATAAAATTTATTATTTTACAGAGAATGTTAAGAAATCACAGTGTTCAATGGACAAATAATTTCAAAATCTATAGTAATTTTTAACAAAAAATGAAGTTTAATTACTGAATTAGTGTCCAAGCAGTGGATTTGAAAGTTGTGTGGTGGGAAAGGTGCCAAGCCAACCAATGGTGTGTGGTGATAACTGATAAGAGAGATAGATAGAGTGAGTGAGGCAATGCATGAAATACTGACACGTGGCAGATAGGGTTGCATGGCACTTCAAGTAGCAGCTTGTTGTAGCCACACTATTTCCACGAGCTCCTCACTTCCTATCTTCTCATTATCATATCATCATCACAAACACAAAGCAGCGAACTCACACATACACACACCAAAAAAGAAAGAAAGAATCAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00111.30	Fer2	68	136	3.30E-18

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0009055	electron transfer activity	Molecular Function
GO:0046872	metal ion binding	Molecular Function
GO:0009643	photosynthetic acclimation	Biological Process
GO:0005515	protein binding	Molecular Function
GO:0019684	photosynthesis, light reaction	Biological Process

InterPro

InterPro term	Description
IPR010241	Ferredoxin [2Fe-2S], plant
IPR012675	Beta-grasp domain superfamily
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR036010	2Fe-2S ferredoxin-like superfamily
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site

trEMBL

trEMBL term	Description
A0A1S2XBN8	_

SwissProt

SwissProt term	Description
FER1_PEA	Ferredoxin-1, chloroplastic

KEGG

KO	Description	Enzyme
K02639	ferredoxin

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G60950	2Fe-2S ferredoxin-like superfamily protein
Medicago sativa L.	MsG0280006336.01.T01	_
Oryza sativa L.	LOC_Os08g01380.1	2Fe-2S iron-sulfur cluster binding domain containing protein, expressed
Cucumis sativus L.	Csa015781	_
Glycyrrhiza uralensis Fisch.	Glyur000192s00009356.1	_
Codonopsis lanceolata	Cl_chr05_34400T	_
Arachis hypogaea L.	AH13G46900.1	Ferredoxin-1, chloroplastic like

Expression pattern