Gene detail

Detail information of Am05G039800.1 Annotation

Gene ID	Annotation
Am05G039800.1	CHASE domain containing histidine kinase protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G039800.1	mRNA	Chr05	177605785	177612049	-

Sequences

CDS:

>Am05G039800.1
ATGGGTCTTAGTTTGAAGATGCAAAGCCACCACCTTCACCCTATGGTTTTGAGGTTACATGAGCAATCCGGAAGCAAAAGAAAATACACATTCATTCAAGCACATAGAGCTTGGCTTCCAAAATTTTTGCTGCTATGGATCCTTCTGATGGCTCTAATTGGTTGGTGCATCTATAGCAACATGGATGCTGATACTAAAGTGAGAAGGAAAGAAGTTTTGGGTAGCCTATGTGATCAAAGGGCTAGAATGTTGCAAGATCAATTCAGTGTTAGTGTTAACCATGTTCATGCCCTTGCCATTCTAGTTTCAACTTTCCATTATTACAGAACCCCTTCTGCCATTGACCAGGAAACCTTTGCGGAATATACAGCTAGGACGGCATTTGAACGCCCATTACTGAGTGGTGTGGCCTATGCTCAAAGAGTGGTTGATCTTGAAAGAGAGAGGTTTGAGAAGCAACATGGTTGGGTCATAAAGACAATGGAAAGAGAACCTTCACAAGTTAGGGATGAGTATGCGCCGGTCATATTTGCTCAAGAAACTGTCTCTTATCTTGAGTCTATTGATATGATGTCTGGGGAGGAGGACCGAGAGAACATTTTGAGGGCTAGGGCCACTGGAAAAGCTGTTTTGACTAGCCCTTTTAGGCTGTTGGGTTCTCATCACCTTGGTGTTGTTTTAACATTCCCTGTTTACAAATCTAAGCTCCCCCCAAACCCAACAACAGACGAGGTCATTCATGCAACGGCAGGATATGTTGGGGGATCCTTTGATGTTGAGTCCCTTGTGGAGAATTTACTTAGTCAACTTGCTGGTCACCAAGCAATCTTGGTCAATGTATATGATATCACAAACTCTACTGAACCACTAATCATGTATGGCAACCAATATGAAGAAGGTGATAATTCTCTTATCCATGAAAGTAAGCTAGATTTTGGAGATCCATACAGAAAACATCAAATGATATGTAGGTATCATCAGAAGGCACCGACAAATTGGATAGCGCTTACCACGGCATTTCTTTTCTTTGTGATTCTTTTATTAGTTGGTTACATTTTATATGGTGCTGGAAATCATATTGTCAAAGTAGAGGATGATTTCCATGAAATGCAGGAATTGAAAGTTCGGGCAGAAGCCGCTGATGTTGCCAAGTCACAGTTTCTAGCTACTGTCTCTCATGAAATCAGAACACCCATGAATGGCATTTTAGGAATGCTTGGTCTGCTTCTACGAACAGAATTAAGTTCAACTCAACGAGATTATGCTCAGACTGCTCAAGCATGTGGAAAGGCTCTGATAGCATTAATAAATGAGGTGCTTGACCGAGCAAAAATTGAAGCTGGCAAATTAGAGCTCGAAGCAGTTCCATTTGACCTTCGTTCCATACTTGATGATGTCCTTTCTCTTTTTTCTGAAAAGTCTAGACACAAAGGTTTAGAGCTGGCAGTGTTTGTTTCCGATGAAGTTCCGGATATTGTGATGGGAGATCCTGGGAGATTCAGACAAATAGTAACAAATCTTGTTGGCAACTCTGTTAAATTCACTGATCGAGGTCATATATTTGTTAAAGTCCATTTAGCTGAAAATAGAAAGGCTACAATGAATGGAAAATTTGAGACATTTCTAAATGGAGGATCTGATGGAGTTATGCATATATCTGGTGGTTATAATCTCAAAACTCTAAGTGGATGTGAAGCAGCTGATGAACGAAACAACTGGGATAACTTTAAGCATCTAATCGCCGATGAAGAGTTTTTCTGTGATGCTTCAACCAAAAAGGTGTCCTGTGGTGAATCTTATGAGAAAGTCACCTTGATGGTCTGCGTGGAAGACACTGGAATCGGAATTCCTTTCTCAGCACAAGATAGGATTTTCATGCCTTTTGTGCAGGCAGATAGTTCAACTTCTAGGAACTATGGTGGTACTGGCATTGGCTTGAGTATTAGTAAGTGTCTTGTTGAACTAATGGGTGGTCAGATAAACTTCATAAGCCGGCCCCAGATTGGAAGCACATTTTCATTTACTGCAGATTTTGAAACGTTTAAGAAGAATTTAATAACCGACGTGAAAAAAGTTAATTTTGAAGATCTACCTTCTAGTTTTAGAGGGCTTAAAGCAATTGTGGTTGATGGAAAACCAGTTAGAGCTGCTGTGACTAGATACCATTTGAAGAGACTTGGGATACAAGCTAAAGTTGCAAATAGCATCAATAAAGCTGTTTCTTTATGTGGGAAAAATGGTTCTTTGACCTCAGGATTATTTCAGCCTGATATTATTTTTGTTGAGAAGGATTCATGGGTTTCTGGAGAGGATGGTGTCTTCAATGTGAGGCAACTGGACTGGAAACAGAATGGACATACATTTAAGATGCCTCAAATGATCGTTCTCGCGACCAATATTAGTAACACTGAATTTGATAAAGCGAAATCCGCAGGTTTTAGCGATACAGTGATCATGAAGCCATTAAGAGCTAGTATGGTGGCTGCTTGTCTTCAGCAGGTTTTAGGGACAGGAAAGAAGAGACAGTTTGGAAAAGACAATCCTAATGGTTCCACTTCAGTACGAAGCCTTCTTTATGGAAAGAAAATCTTAGTGGTTGATGACAATATGGTGAATAGGAGAGTAGCCGCTGGTGCTTTAAAAAATTTTGGTGCTGATGTGAAGTGTGTAGATAGTGGCAAAGCTGCTCTTGAAATGCTTCAATTACCTCACAATTTTGATGCTTGCTTCATGGATATTCAAATGCCAGAAATGGACGGGTTTGAAGCCACACGACGAATTCGGAAGATGGAGAGAAAGGAAAATGAACATATGAATGGTGAATGTGGTGAAGGAAATGGGAGGAAAAGTGAGTTCCATATACCTATATTAGCCATGACAGCTGATGTAATTCATGCTACATATGATGAGTGCTTGAAATGTGGGATGGATGGTTATGTCTCAAAACCTTTTGAGGAAGAAAATCTTTACCAAGCAGTTGCCAAGTTTTTCAAGGCCAAGCCTACCTCAGTAGATTCATGA

Protein:

>Am05G039800.1
MGLSLKMQSHHLHPMVLRLHEQSGSKRKYTFIQAHRAWLPKFLLLWILLMALIGWCIYSNMDADTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRTPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVDLERERFEKQHGWVIKTMEREPSQVRDEYAPVIFAQETVSYLESIDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPPNPTTDEVIHATAGYVGGSFDVESLVENLLSQLAGHQAILVNVYDITNSTEPLIMYGNQYEEGDNSLIHESKLDFGDPYRKHQMICRYHQKAPTNWIALTTAFLFFVILLLVGYILYGAGNHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLGLLLRTELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDEVPDIVMGDPGRFRQIVTNLVGNSVKFTDRGHIFVKVHLAENRKATMNGKFETFLNGGSDGVMHISGGYNLKTLSGCEAADERNNWDNFKHLIADEEFFCDASTKKVSCGESYEKVTLMVCVEDTGIGIPFSAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQIGSTFSFTADFETFKKNLITDVKKVNFEDLPSSFRGLKAIVVDGKPVRAAVTRYHLKRLGIQAKVANSINKAVSLCGKNGSLTSGLFQPDIIFVEKDSWVSGEDGVFNVRQLDWKQNGHTFKMPQMIVLATNISNTEFDKAKSAGFSDTVIMKPLRASMVAACLQQVLGTGKKRQFGKDNPNGSTSVRSLLYGKKILVVDDNMVNRRVAAGALKNFGADVKCVDSGKAALEMLQLPHNFDACFMDIQMPEMDGFEATRRIRKMERKENEHMNGECGEGNGRKSEFHIPILAMTADVIHATYDECLKCGMDGYVSKPFEEENLYQAVAKFFKAKPTSVDS*

Promoter(3k):

>AM05G039800.1
TAGATCTATTTCAAACCAATTCTTTTTACACCTTATGGAAGGTTCACCAATTCCCAAGTATTGTTTTTTTCAATAGAGGCTATTTCCTTATCCATAGCCTTCCTCCACTTGTCTTCTTTCACGGCTTGTTCACATATCATTAAGTTGTATAGCAGATCACTTTCATATACACCATCAATGCCAGTTTCTTCTGTCACCGCACAGCCCATATAATAGTCTTTGTGCCAACTAGGATTACTCACATTTCTGCCACTGGTTGTTTTTACTGTAGCAATGTTAGTGTTCTCCTGTTCATTACTCTCAGTAACTGCTTCATTCTGATTCAAGTTGTTTACTTCAACATGAGTGCTGCTTTCACCAACTTCAGTGACCTCCTCACTTTGTTTTGCAGTTTCCACCTCACTGTCATCAATAAGTTCAGTAGCTGTTTCTTTACCTTTATCTGTCTCCTTGGGATTCCATGTTTCTTGTTCAGAAAAAATAACATCTCTGCTAATCATGATTTTTTTAGTTATAGAGTCATAGAGCCTATATGCCTTAGACTCTTCACTTACTCCTAAAAAATGCATTTCGGACTCTTATCATCAAGTTTTTTTCTATTTACATCAGGAATGTGCATGTGTGCAATGCACCCAAAAATTCTAAAATGCTTGACAGACGGTTTCACATTGCTCCAGGCTTCTTCTGGTGTGACATCTTGGACAGATATGGTAGGACGTCTATTAAGCAGATAAAAGGCCCATTTCATGCTTCTGGCCAAATTTTTTTTTGTAGATTTGCCTCAGTTAATAGGCTCCTAACCATATTCATTACTGTTCTGTTTTTTCTCTCAGCCACACCATTTTGTTGAGGTGTGTAGGCAGCTGTAAGTTGTCTCCTAATACCATTAGTTTCACAGAATTCATTGAATTCACCCCCTCTATCCGTTCTTAGGCAACTAATGATACATTGTGATTCTTTTTCGACCATTAATCTAAACAACCATTCACCCCCTCTTTCCGTTCACAGAATTCATTGAATTCTTCCTTTTGACTATCCAAACAAGTTTTAGTGAAAAATAAAACTTTTTTTTTGTCCCACGTGAAAAATAAAACTTGAAATTCCTTCTTTTGTAAAACTGATTTGTTACGTTTTTCTCCGTTGATGATGACTTATATAGAGATACGATACGTCTTTTATCAATTTAATAAAGTCGCATTTAATGTGTCAAAAAAAATAAAGTCGCATTTAATGTAAAATCTGTCAAAAGAAATCCGGGAACCGGTGATACCGTTTTAGTGGCAAAAGATAACCTAAAAAATAACTAAATTAACTGTTAAGACATTGAAGTAACAGAACATTAAAATGTCCACATATGAATTATGGAAGCTACATTTCTTTACTTACTCCAGCCTGCTTTGATGACTCCACAGTCAAAACACAGTTCAAAACAACATTATTAATTAATTAATTAATTACGAAACCAACTAATGTTGATTATCAATCAAGGGTATTTACGGAATTTCAATTATAAAAGGTTAGGGTGTCCAGGGAAATTCACATGGGAATAAGATCCGCGCCTTGTCGCCAAGTCATTATCGCTCAGATTTGTGATAGCGATTTCCAGTTTTATATTTTCTCTCTCTCTCTCTCTCATCTTCTCTACTCCACTCTCTCTCTGTCTGTTCTAATTTTTTAACGTTGTTGGAATGGAAAACATAAAAAGTACAAGGAAAGGATTGAGATAGTGTTTGTTGTGGTTCAACTTCAAGAATAACAGTGAGAGTAGTGTGCAAAGTTTCTAAATTTAAGGTTCATAATCTTCAAAATTAGAAAAAACAGCAGCAACCCTTTCAACCAAATCAAGAAGACATCAACTTGAGGAGAAAAAAATGCAAACTTGAGAAGCAGAAGGTGTTGGGGATGAAAGAGAAATGCACTAGTAGTGTTAGTGTTGTTGCAGAGAAAGAAAGAAAGAGAGTGGGTGTTGAATTGACTAGTGTACTGTATTTTTATTCTTATTATTACATCATGTGTGGTTGTGAAGTATAGAAGGGAGACAATAGCGTATCTGGGAAAATCGTTGAAATTGAAAAAGAAAAGTAACAAACCACAGAGAATAGAAAGGTTATTAATTGCTTCAAAAAAAAAAGAAAGAGAGAGAAAGAAAGAAAGGTGCAGATCATGTCATGAGTGAGGAAAGGAACCAATCTGGTTTTCAATTGTTCATTGTATAACCACCAACTTCTCTTTCCTGTACAGGTAAACATTGTTCCTCTAATGTCTCAACAACTCTGTCTCTTTCTCATTGGGCTCTGTGCTTAGCTGTGGTGTTTTTAGGGTCAATCTCTATATTTGATTAAAAAATAAGAGACTGAACGTGCTCTTGTTTGTCTTTGAGCAAGGACTGGTTTCACGCCTACAAAGCATGATTAGAGCTCTCTAATTTTTTAATAACATAAATATATTGGCTATTGGGAGAAGGGAGAGTCTTTCTTTGGAATTTGAGCTGTTTTCCATCTTTTGAGACCCATGCTTGTCTCTCAATTTTTCATCTTTTATATATTTATTGTCTGAGTGAGATGTCTCTCTTTCTTTCTTTCTTTTTTCTATTCTGTCATTTTATGGGGCTGATTTTTGAAATGGGATTTGCTTCTTAAAAAGTGATAGAGAGAAACAAAAGAATTGTGGCTAATCATTCACCATGCTTGTTTTGCTTATTCTTCGTTTTGAGAAGTGTGATTTGAATCACGCAAAACAATGCTGTAATGTAATGATGCAGTGTTTGTTTTGTTGTTCTTTAACCTTTTTCTTTCAACCATCTGATAATAAAAGTGTCTGAGATTTTTAGAGTACTTTCAACTTTAAACAAAGTGAGTGCTTTTATATATATAAGTACACTGTTAATTATTTTTGGAACTTGTTCAACTTTTATAGTTATGAACAAGAACACTGCAGAAAGGCAATAGAAGGGCAGAAAAAACCAGGAAGAGAGATTTATTATAGAGTTAGCAGTTGGTG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03924.16	CHASE	113	293	1.30E-37
PF02518.29	HATPase_c	495	679	7.10E-32
PF00072.27	Response_reg	863	993	8.00E-26
PF00512.28	HisKA	383	448	2.20E-17

Gene family

Gene family	Subfamily
Transcription Factors Family	Others

Gene Ontology

GO term	Description	Category
GO:0000155	phosphorelay sensor kinase activity	Molecular Function
GO:0000160	phosphorelay signal transduction system	Biological Process
GO:0016020	membrane	Cellular Component
GO:0046872	metal ion binding	Molecular Function
GO:0016787	hydrolase activity	Molecular Function

InterPro

InterPro term	Description
IPR001789	Signal transduction response regulator, receiver domain
IPR004358	Signal transduction histidine kinase-related protein, C-terminal
IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily
IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
IPR036890	Histidine kinase/HSP90-like ATPase superfamily
IPR003594	Histidine kinase/HSP90-like ATPase
IPR005467	Histidine kinase domain
IPR011006	CheY-like superfamily
IPR042240	CHASE domain superfamily
IPR006189	CHASE domain

trEMBL

trEMBL term	Description
A0A2Z6M2Q2	_

SwissProt

SwissProt term	Description
AHK4_ARATH	Histidine kinase 4

KEGG

KO	Description	Enzyme
K14489	arabidopsis histidine kinase 2/3/4 (cytokinin receptor)	[EC: 2.7.13.3]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G01830	CHASE domain containing histidine kinase protein
Medicago sativa L.	MsG0480023975.01.T01	_
Oryza sativa L.	LOC_Os03g50860.1	histidine kinase, putative, expressed
Cucumis sativus L.	Csa008273	_
Glycyrrhiza uralensis Fisch.	Glyur000500s00018152.1	_
Codonopsis lanceolata	Cl_chr01_33520T	_
Arachis hypogaea L.	AH13G46190.3	Histidine kinase 4 like

Expression pattern