Gene detail

Detail information of Am05G039770.1 Annotation

Gene ID	Annotation
Am05G039770.1	transmembrane kinase 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G039770.1	mRNA	Chr05	177571552	177574487	-

Sequences

CDS:

>Am05G039770.1
ATGGCGAAACTTGAAATATGTTTTATAGGTTCATTCATTTTTTGTGTATTTTCATTTCTGGTTATCCCGGCAAAGTGTCAAGATGTAGAGGTGATGAATGTTTTGAAGAACAGCATTAATGTTCCAACTAGCTTCCAATGGACGGGCCTTGACGTATGCAAATGGAAGCACGTGCAATGTGACTCAAATAAACGTGTTACTACTATTCAAATAGGGAACCAGAATCTACAAGGCTCTCTCCCTAAAGAACTTGCCAAGTTGACAGCCTTGGAGCATTTCGAGTGCCAAACCAATGCTCTCACAGGTCCATTCCCTTACCTCTCAAAATCCTTACAAAGGCTTATAATTCACGACAACAAGTTCAGCTCGATTCCCGATGATTTCTTCAAAGGAATGAGTAGTTTGCAAGAAGTGAGAATCGATGACAATCCTTTCCCACCGTGGCAGGTTCCCAACACTTTGAGAGACTGTGTTGCACTCCAAACTTTTACTGCTCAGAGTGTTGGCTTTGTTGGTACCATCCCAGATTTTTTTGGTAAAGATGGTCCCTTCCCTGGTTTGGTTTTTCTGGCTTTGTCTGATAATTCTCTTGAGGGTGTCCTACCTACAAGTTTCTCGGGTAGTTCAATAGAGAATCTTTTGGTCAATGGACAAAATGGAAACTCTAAACTCAATGGCACACTTTTTGTTTTACAATACATGACATCTTTGAAGCAAATTTGGGCTAACGGTAATTCATTTACTGGTCCTATACCTGACTTGTCACACCTCGATCAACTTTCTGATGTGAATTTAAGGGATAACCAGCTGACAGGTGTTGTTCCACCTTCCTTAATGAACCTTCCAAGCCTCAAGTTTGTGAACTTAACCAACAATTATCTTCAAGGGCCACTTCCCAAGTTTAGGGACGGAGTAGCCGTTGATAATAACATGGATAGGGGGAGAAATAAGTATTGCACAAATGTTATAGGGCAACCATGTAGTCCTCTTGTGAATGCCTTACTTTCTGTTGCTGAACCATTGGGTTATCCTCTCAATTTTGCCGAGAGTTGGGAGGGTAATGATCCTTGTGGTAATAAATGGATGGGGATAATTTGCTCTAGTGGGAACATTTCTATTATCAACTTCCAGAACATGGGCCTTTCTGGCACTATTTCTCCTAGTTTCGCCATTCTTGGTTCCGTCAAAAAGATACTACTTACAAACAATAGTCTCACAGGTACCATACCAAGTGAACTTACTAGCATGCCGATTTTGCAAGAGCTGGATGTTTCCAATAACAATTTGTATGGTAAGGTTCCATCATTTCGTAAAGAGGTGGTTCTAAAATTTGGTGGGAATCCCGATATTGGAAAGGATAAGCCTACTTCTGCAATTGGCTCGAGTTCTAGAGGCAGCGATAATAAAAGAAATGTTGGTGTCATTGTTGGAATTGTGGTGGGGGTTGTTGTTTTACTTTGTCTTGGGGCTCTAGTACTTGTTAAGTTCAGGAATAAGTTAAGGAGTCATGAAGAAAAAGCTAAAAACCCAATATCAGTTGTGGTACATCCTCGACATGAAAATGTTGAGAATGTTGAAGGAAATGATGGAGCATTAAGTCCAATTGGTAGCATGGTAATTTCAATTCAAGTTTTGAGGGAAGTTACCGATGATTTTTCTGAAGATAACATAGTGGGGAAAGGTGGTTTTGGCACTGTGTATAAAGGAGGGTTGGATGATGGGACACAAATTGCAGTGAAAAGGATGCAAACAGGATTGGTTGATCAGAAAGGTTTGAATGAATTCACATCTGAGATTGCAGTACTTACTAAAGTTAGACACAGACATTTGGTTGAACTCATGGGGTATTGCTTGGAGGGAAATGAGAGACTTCTGGTATATGAGTACATGTCTCAAGGGGCACTTAGTAAACATTTGTTCAATTGGCAAGAGGAAGGGATAAAACCATTAGAATGGAAGACGAGACTTAGTATTGCCTTGGACGTAGCTAGAGGTGTGGAATATCTTCACGGCATGACACAACAAATTTTTATCCATAGAGATCTCAAACCATCCAACATTTTACTTGGAGATGATATGCGTGCTAAAGTATCAGACTTTGGATTGGTTCGCCTTGCTCCTGATGGAAAAGCTTCATTCCAAACTAGACTTGCTGGAACTTTCGGATATATGGCACCAGAATATGCAGCAACCGGGAGACTTACAACAAAAGCTGATGTATATAGTTTCGGAGTGATTCTTATGGAGATAATAACAGGAAGAAAAGCACTTGATGACAGCCAACCAGAAGAGAACTTCCACTTGGTTACATGGTTTCGTAGGATGCAGCTTAACAAAGATTCATTTCGGACGATCATAGACCCAACAATTGTAGTTGATGAGGAAACCTACGTTAGCATCAACATTGTTGCCGAGTTGGCGGGGCACTGCAGTGCAAGGGAGCCTTATCAGCGTCCTGACATGAGCCATGTAGTGAATGTGTTATCACCTCTTATTGAGAAGTGGAATCCTACAGAACCAGATGATGATGCGTATGGAATCAACTTTGGCATGACATTGCCAGAAGCACTTCAAAGATGGCAAGCTCTCGATGGAAGAAGTGCATTCCTTGACTCAAGTTATTCTCCTTCCACAATGCCCACTAGTGGATACAACACAAACTCAAGTTAG

Protein:

Promoter(3k):

>AM05G039770.1
GACCAAAAGCTGTCGACCCGATCGGGGTAGTAAGCAACTCATGTGTGTGAAGACCACACCTAACATTCACACGCCAACCCCCATGACGTATTGTACAAGTAGCTCTCAATGTAAACAGACAACTTCTTTTCTTAGACCCGAAAACTCTAGAATCATTAGACCACTTCCCTTGCTTCTCGCAACAAAAAATAATATTATCTCTAGAACCCCTTTTAACTCCAGCTTTGTCAGATCTTACAATGATAACCACAACTCCAATACGTCTCCCAACCGCTTTAGCCCACTCTTCTACATCCTCGCGTGTAGAAAATATCTACAAAATAGAAAGAAAAAAATTACGCACTTAATTAATTAAATATCTACCAAACTTTGATTAAAAAAATTAGTATGAAAAATATACCCTCTCCGTCCAGAATGCCTCTGTAGTGTCTACCACGAAAGGAACAACCTACGACTCTGTATGCGAGTCAATATCTGTTTCAAAATAGAACAACAATTATACAGAAATTAATTTTAAAAAGAAAATAAATCAGATTTACGTATCGCAAACGTAAATCCACTTTATATTTTTCAAAATCGGATATACCCCCAACCAGGTAAATTCGATTCATTAAAAGATGGATTTACGTTTGGGGCACGTAAATCCGATTGCACATCGGATTTAGCTATATCCGTCAGGAGAAAATTTCGCTTTCTATACTGAAATAAATGGTCAAATCAGATTTATTTGTCAGTTTGATAGATCTGATTTGACTTATGCGTGTGTATTTATTACGTATTTAAAGCTAATCGTATTTACCTTGCATTTAGGTAAATCCGATTACCATGGTCCCCCCCACCAGAGAATATTCAAAAAGTCAATTTTTGTTAATTATGTCAGGGGTATTTTCGGGATTACAATAATGTGTGGGGGTAGAAGGGAGTTGATGGGGTATAAAAAAACCCAACTTTTTACACCTTCCAACAACCTCAAGCCCACTAAATGCATTGGGCCAATAACTTTAACCTAGTTTACAACCTTATGCATTCGATTGATCGACTTATAATTACCATCACTCAAATGACTTCAATTTGGCTAGAATTATTTTTTATAAGCAAAAATGGAATTAAGGGGAGTACAAGGGATACTCCAACCCATACATTAACTTCCCGGGGCCAAAACTCATGTTGATTGCTTGTCGTATTCGGGTATCAGCTAATTATTTTTTGGATGTCAACAATTCCCGCTCGTGTTATTAAGTTAAATCATCATAAATGAATGCTTAAGTAATGTAATCAAATCTTCATTCTTGACACCTCACGAATCATTTCTATATCTGCATCAAATGGGTAGCATTCAAACTAATAACTCCATTTTTTTTCTTTTCTAAAAAAAAAACTCCATTTTTTAAACTGATATGCTTAAGTATATGTTTGGTTCAATTTCTTAGGAGAAGATAAACTTTAAAAAAAATTATATACAAATTACAATGAGAAGGGATTTTACAAATAGCAATTTGATTTTATTCCAAGTAAACGGACTCAAACTCAATCAAACCTTAGGGTTGGTAGAAAAAATGGCTCAAAATTTTTTGATTTTTGTGATTTACTATTTTTTTCGCAAACCAACAAATTCGAAACGAAAAGTGATGCATAACTTATATTTATTGTTAGCAAACATATAAAAATTTTACCATTTTTGTAAGCATTCAAACATGTATATTTTGAGTTTATTGTAATTAATTATTTTCAAATTTGCTCTAAGTAATTCTTTAAGAAAATGAGAAGCTTACTTTTCACTACGATGCTCTGCAAAAATCTATTTTAACATTGTTAAAAATTATAAATAGTATTTTTATAATGCTATAATTTTAATTTTAATAAAAATATAAATAATAGGAATTTTACTCATAAAAGTAGTGGTGACTCTAAGCAAGAAGTCAAGAACGACCTCCCAGGACCCCATTTTGGAAGGAATCAAATATATATATATATATATATATATATATATATAGACTATTTCATGATAATGACTTAGAGTCATATTGCAAACTCTTGAAACTTACCTAAAGCACGATGATTCTCATGTTCTTTATAGTGAATATCTATTTGAATAATTGAAAGTCAATATAGATGTTTTAACCGCCAAATCAAAATAAAATTATATAATATTGATTTTTATTAAGACATTTAAATATTTAACATTTTTCTCAATGCATTGTTGTGCATAGAATCAATATTATCATCTATTCTTGTTACTATCTCATATGCTTGAGGCATATTTTCCAAATTGAAATTGTGTTAGAATCTTATTCGTGATCTATTATTATATGACAAATTAAAAAAGTTTAACATTTTTACTTTGATTACTATTAATATTTTTAAACAACTTGATTATAAGGATCGAATAGTTAGTAGAGCATGATTTTTAAATTATTTTAGATGTAAAAATGTTTTAAAAATCAACAAAAGAAAATTGTGTTAACTCTAATAATAGATTAATGATGATGGAGATATGGTTGCGACAAAATATTTCATCGGTGTAAGAAATTGATTAGATCCAATCCTAACAAATGAAAAAGTAAAAGGGATATCATCCTCCTCAATTCCTTATCTCTATTGTAACAGAACACAACTTACTACAAACATTAACTAACGTGCGGTTTCCCTCTGAGCTGTGGGATAGGAACATGCATTGCAAACCATTGATTCCCAAAACTTCCAAAGCAACTGGGGTCCACACAACTGAATCATTCTCTCTCTCTTGTTGCTTGCACCATCTCCTGTTTCTCCCCTTAACCAATCCAACAACGAGTTTTTCTCTTTCCAAAATTTGCCTTTTCCGTTGGGAGGTTCCTCCTCCCTCGTCCCTTCTTCACAAAATGCAATGTGATCATCTACCTCCTTAAAACCCCTTTTAGGGGAATTCTCCATTTTCTTTCTCAACCACCTCAGTTTTTCCTTTTCTTTTTAATCATTCTCCCCCTCTCTCTGTCTATCGTTCAACGAAAACATAAGATT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	556	826	1.60E-48
PF00069.28	Pkinase	553	826	5.40E-47

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.6.1:RLK-Pelle_LRR-IX

Gene Ontology

GO term	Description	Category
GO:0007178	cell surface receptor protein serine/threonine kinase signaling pathway	Biological Process
GO:0005545	1-phosphatidylinositol binding	Molecular Function
GO:0030276	clathrin binding	Molecular Function
GO:0004888	transmembrane signaling receptor activity	Molecular Function
GO:0046872	metal ion binding	Molecular Function

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR032675	Leucine-rich repeat domain superfamily

trEMBL

trEMBL term	Description
A0A1S2YDQ8	_

SwissProt

SwissProt term	Description
TMK1_ARATH	Receptor protein kinase TMK1

KEGG

KO	Description	Enzyme
K00924	receptor protein kinase TMK	[EC: 2.7.11.1]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G66150	transmembrane kinase 1
Medicago sativa L.	MsG0080048505.01.T01	_
Oryza sativa L.	LOC_Os03g50810.1	receptor protein kinase TMK1 precursor, putative, expressed
Cucumis sativus L.	Csa011347	_
Glycyrrhiza uralensis Fisch.	Glyur000500s00018156.1	_
Codonopsis lanceolata	Cl_chr01_39600T	_
Arachis hypogaea L.	AH07G13850.1	Receptor protein kinase TMK1 like

Expression pattern