Gene detail

Detail information of Am05G039730.1 Annotation

Gene ID	Annotation
Am05G039730.1	translocase of the outer mitochondrial membrane 40

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G039730.1	mRNA	Chr05	177498718	177505177	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM05G039730.1
TGTTGGACTATATGATAACCTTAGAGGGGGGTGAATAAGGTTATACGCTAAAATTGAAATCTTTTTAATTTTCAAAAATTAACGATGCACGTTTAAATCGAATGCGGAAAATAGGATTTAAACTATATGCAATACCTAAGCAAGCTATAACTATGACAGAACCAGTTACAGTGATATTTTACGCTAACCACACTATTATCAAATTTAACGATAAACATATTGTGATATTGAACGCAGCGCGATGAAATCAAATATAACGATAAACAAATATAAACAAAAAAAAAGTAAAGAGAAGGGAAAGAGATACAGCGTAATTTTTACGAGGTTCGGGATAAAAAACCCTATATGAGAAGAACTTCTTCAACGTCTTACAAGCAAACAACTTCCCTATAGCTACCACACCAATCTCAATTTTCCCCAAATTGAGAACCCAAGCTCCCCGCTAAGGATTTCGCTAACAACTCAATCTCCCCGATTGAATTACCCAGGAACACTTCTCAGGATTTCACAACAACCAAGTAATAGATGAATACAACTGAAAAACTATGATCCAATCACTCAAGCAATATAATAGTATAGTAGTTGAGAGAGATGAGTGATTTGGATTTAACGATGAAGAACTTGAAGAAATAATATGATGGTGAGAGTTATTTTCTTCTTTTTTTTTTTGAGTTGTGCGTTGTGTTCTCTTTTTTCGTGAAAAACCCTAAGTGCCTATTTATAGAGTTTGTAGAAATATGACCATTGAGGCAATTTTTCACGTAAAATAGATGAGTAGTAAATCGATTGATTGCTTAAAACAATGTGTATGTGAATCGATTCATTTACTCAAAACATGACCTTTGAAAGCTTCTAAAAAGAGATGAATCGATTATATGCTTAAATAGGAGTGTATAGAAATCGATTCATTGCTTGAGAAATAGGAAGGTTGAAATCGATTTATGGCTTTAAAAGATAAGGAAGAAATCGATTTTGCTCTTCACAATAGCAAGTGAAGAATCGATTTCTTGCGTGTGGGAAACATGTGAGGAATCGATTCCTGGCTTTAAAAGAGAGAGAGAAATCGATTTTTCCATTTAAAAACACAAGGCCGTCAATCGATTGTTTTCTTTCCAAAACATATTCCTTTGAAAAACCCATAGGCTAGAAATCGATTTCTAGCTTTGTGAAGGAAGCCACAAATCGACTTCTAGCTTGAATAATTAGGCTAGAAATCGATTTTCAACTTATAAACACAAAGTCATCAATCGATTCTTAGCTTTACTATTTTCTCATGCTACGTGCCTACCTATTAGGCTTTTATATAAAAGATTTTTCTAAGCTTTTAACACAACAGTTATATTTTAAAAAATCATCTCTCAACTACTAAAAGTTATAGAACTGAAGTGATAGGATCTTACATTGTGTCCTATCCAAAGCAGATTAACAAATAGTTCTTGAACTCTAGAGTAGCTTCTCCTCCAAACCGCTACACTTTAAAATATCCTGCTATTTGATTCATGAAGATATCGTGCTCTTTGATTCATGCCCTGTACTCTTGTTCAACTTTAACCATTAGTAGACAAATATAACTTATCATACAAAACAAAGAGTGTTTGACCTTGGTTCAACAATTTTAACATGTCTGTGAACTAAATATTCTCTTGTTTATGCAGAAATAAGAAAATGTTTGTCTATTTTTTTTTTTTGCATTTTCTTTAGTTGTTTAATGAACCGAGCAAATTTTAGGAGGTGATTTTGAGTTGCCCCCTTCTTCTCTCTATGTTCAACCTTGTGTTCTCTGCGTGTGCTACTGGTTTTCTGGTATCCAGAAATCACCTTTGAAGAAGATGATAACTAGAGACTAATTTGACCTAAACATGTAACGACAAATATGTCTTTTCCTTAAAAAAAACCAAAAAAGTTAAATGAGATAGTAATTTTGACAGAAAAATGACAATAAGTGTCACTTAACGTGACACACAGGTGGTTAACGTGCCACGTAAGTGATGTTTACCGACGATCTTAACTTTGGATGGTCTGTCTCTATTTGAAAACAGAGACTAATGTGTCCCTTAAAAATTTATCAGGAACCAACATGTCCCATAGTAAAATTATCAGAAACCAATTTAGGCATTTTTTTAAATAAAGACAAACTTGTTTTTTAGAAAAAACACACACTATTCTTGTTTATCAAGAAATATTCATTCACATCTAGTAAGTTTTATTTTATTTTATTTTATTTTTTTGGATGAGATGGATCGGGTATCTTCCAGCTTAACCAATGTATTGGTTTCGAATACAGACTCGGGAATGCAAGAGAGTTAAATTTCTTGAGGGAGAGCTTTGCCGCTCATTGTGGTCCTACCCGCTCGAGGGATTAACTTCTACAGTTGAGGGCAGAGGATACCGGTTCACACAAAAAAATGACACAAACATGCCACTATTTTATTATATTAAATAAAAAATTTAGTATATATTTTTTTGGTATATACCAGGGTATCCACCGCCGAACGCAGTGACTAATCCCCTCACTGAATTGGAGACACTTCGAAGGGTGGGACAGCTGACCCAGGGATTTAAAGCTGCTCCATACCCAAAGGGAGGATCGAACCCTCGACACTTGGTTAAGAGATGATGAGCCCCAACCGCTCGACCACGCCCCGTATAAAATTTAGTATATATGTGTTTCCCGTCAAAATAAATAGATAGATATATGTGTTTATTAACAAAAAAATTTGATGTGTTATTTAAGTGGAATATAGAAGCAAGTGTAGTTTCCCGTTTTTTCCGATAGTGATTCGGGTAAAGGTTAAAACCCGCACCCATTAAAACGGGCCGGATTTTTGAAGTGTGAAGCGAGAAAATAGAGCGAGTGAGTGAGTGATGCAAAAAGAAGCCAGCTAGGGTTTTAGCTAGCACAGAACCACGCAGTCATCGAAAGTTTTTTGGGAAGAGGGGTTTTAGAATCCGATTTCATTTCATCCTCTTCTTCTCTATCTCTCTCTGATTTCTCTAACA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01459.25	Porin_3	27	300	5.10E-81

Gene family

Gene family	Subfamily
Transporter family	MPT

Gene Ontology

GO term	Description	Category
GO:0030150	protein import into mitochondrial matrix	Biological Process
GO:0005741	mitochondrial outer membrane	Cellular Component
GO:0008320	protein transmembrane transporter activity	Molecular Function
GO:0098798	mitochondrial protein-containing complex	Cellular Component
GO:0098796	membrane protein complex	Cellular Component

InterPro

InterPro term	Description
IPR037930	Tom40
IPR023614	Porin domain superfamily
IPR027246	Eukaryotic porin/Tom40

trEMBL

trEMBL term	Description
A0AAN9R507	_

SwissProt

SwissProt term	Description
TO401_ARATH	Mitochondrial import receptor subunit TOM40-1

KEGG

KO	Description	Enzyme
K11518	mitochondrial import receptor subunit TOM40

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G20000	translocase of the outer mitochondrial membrane 40
Medicago sativa L.	MsG0480023969.01.T01	_
Oryza sativa L.	LOC_Os03g20750.1	outer mitochondrial membrane porin, putative, expressed
Cucumis sativus L.	Csa002943	_
Glycyrrhiza uralensis Fisch.	Glyur000500s00018161.2	_
Codonopsis lanceolata	Cl_chr06_31850T	_
Arachis hypogaea L.	AH03G43460.1	Mitochondrial import receptor subunit TOM40-1 like

Expression pattern