Gene detail

Detail information of Am05G039630.1 Annotation

Gene ID	Annotation
Am05G039630.1	vacuolar iron transporter 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G039630.1	mRNA	Chr05	177296112	177297487	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM05G039630.1
TAGATTTTACTTGTCACAACTCTTCATATTCTTATAGGTGATTCGTGAACAAATGATTTTTTAGGCGAAATTGCTGATGCGGTTTATTAAGTTATTTGTTTATTGAGTTAGTGCATTATATATTTATTTTTTCAAATTGCTCATTTAAATTTTAAAACGTTAACAATATTTTTTTGACCAAGAAACGTTAACAATATTGATCATGCGTAATTTCCATCCAACTTAAAAAGGTTGCCATAACTCGAGAGGTACTTCCAAAACTTTGGTAGTTTTTGTATTTTATTTTTATTGGCATAATGGCAACATATATATTACAGCGTCGTAAGTCGTAACTCAAGATATATATGTCGAATCTGAGAATTGACCATCGACTTACGCTTGCCAAAATGTTGTCATCGTAATGATTTTTTCACAATTGAGTTGGTTCAACGTTTCATCCTATGTCAAACATTAAAATAAATATTAGGTTCTAGGAAAGGATCCATTAGTAATTTGAATTTCATTTGTATGAGGAATTGAGGATATTGTTGTATTTTATTGAAAATAAAAAGATATTTCAAAAGTGAGAAGTCTCACATTGCTTGGCTTTGGATTCGCCAAAGTCTTCATATACTAAAGCTTAAGGAGAGCTAGTAAACATGCAACTAGAAGGGACTCCCTCGCGCGCACAAGTAGGGACCAACATGGCTTGGATCGGTGCGAATCTTTCGATTCCCCCCCTGCGCGCTCGACTGCCTTTGTACTAATTTTATTAAATGAAATATTACTTTTATCAGCCTATCCGTATACGCCCAATCATGGGTCGAAATGTTTTATGAAACATTTTGTAAGGGAAAGCTCAGGTCGAAAAATTGCAAGTTGGTCGAACTGATTGGCAAAACAATCTGGTCGAAAACTGAAAGTTGGTCGAACAGACTGGTGAAAAGATTTGGTCGAAAACTGAAACTTAATCCCATTTATTTTGTAACTGTCAGTTTCTTCCAACGGCTTCTTCTCTCTCTTAAACATTTTGATTACAATTGATTTTCGAAACGGTTTTTGACTGGCTATTGATTGCTGGAGCCTATGTCTCTAACAGCTATTTTTCTTAAAGCCTATATAAACAATTTCGAGTTGCACTTGAAAACAGATCAGAAAATCCATTTTCCACATTTCCTGAAAAAGAGCTATGGGTTGCTCTCCTGTTAATATCCAGTTCTTCTTGCTAGTTCTGATACCTCTTTCGCTACTGCGATTGAGAAGACCCGGTTGTACCTCGGGGAATTTGCGCTGTAGAGGCGGATAAATTCTTCAGGGCAGTCGCAAGACGCCTCCGGTTGCTTATCTAACATTTGTGTTTGCAGGTTTAATTTCGACAGCATCAGTACAATTCGACAGCAGCTACTTCGACTTCGACAGTTTCTATTTCTGCACATTTAGTTCGCAGCAGTCCTTGCCACTCAATAGCATCAGTCGAAATTTTACTTCTGAAATTCGACTATAGAGTTTCGACTGCAGTCAGGATCATTCGACTACAGCCATATCAGCATTTTAGACGACAGATATATCCATTAATATTTGATTGATTTGATACAAAGGTTCTGTCTAGTTTCAAGTCTAATTACGAACAGGATAGTGATTACTTGCTAAAAGTCACATCAATATTCTCATCGGGTGTTCAAGAATTCGGTTTCACTGGATCCAACCTTGAAATATTTTAACTAAATAAATAAATCAGTTTTTCGAACTAAACTAGATCTAATCATTGAATCAAACTGCTTTACAGCAGCTAGACTAACAATGTATTTTTGCAGTTAATTTGGATAAACCTATCGAGTAATTAACACTTATGAAAAAAAACAGACGAATTAAAGTTTTAAACAACAATGCTCGCTTAAATCAAACAATAATGTTATGTGGACACACAAATTTTGACACAAATACAGTGTGTTTTGTGTTTCTGGGTATTTTCACAATTCGTGTATGTTGTATAAAATGAAAAAGTAAGTGAGAGATAGACACAAATATATAGTGTCACATGAGGGTGTCAATTATTATGTGTCCAAATAACACAACTCTAAATTAAAATCAATTTCTATCTCAATTTCTTAGGTTGTATTTTCTATAAGACCTAGTGCAACCGAGAAAATTGACATTAGATTGGATTTTTTTTTGGTTACTCGGGTAAGTTCCCTCTTCAAACTCTTTTAATTAGGGTGAAACAACAGCCGAACTATGACCAAGAATTACAGCATGTGTTGCTTATATATAGCAACTTATTCTACTCAATCATATATATATATATATATATATATAATATTGTCGACAAACTACTTAATGCTTTTGACCCCTAAATAATGAAGTTTTTGTTGACAACTTCCAGTGATCTGTATCAATTTTCCTGAAACCCAAATTAAGCAGTTATCAATTGCTGAGTTTTAATTTAAAGATGTAATTATCACTTGAAGTCTTCAATGAACCTTCACAAATGACACAAACATTAATAAATTAACAAGAGGCCCCAAACATGCAGAGCTAGATAGATATGCAAACTATTTTCTTTATTTGCTTGCTGTGCTTAAAGATGGCGTGTTGTATTATAGCTTCTTCTGAATCTGATAATTAAGGTCAGCAGGTATTATCTATGACATTAATTTCTAATATATATATATTGTAGCATGATAGCATCCAATAAGCGGTGATATGTGAGAGGAAGAAGAAACCAAACCTAATGCTATTTTAGTCAAGATACTGGAATATAACTTTGATCCATTAATTTAATATTTCCAGATACTCCTATCAACTGGTTAATTTGGTTAGTAAATTAATTATAAAATAATATGACGCGTGCTAACCACAAGTCTCTATTAGTTTATTAAACCCTAAAGTGAACGCAAAAGATACCGCTAGACTTTTGGGTATTATATATATGTGCATATTCACAGCACGAACAACAAAAACAATAAGGCTTTGTTTGGATTACAACCTCACGTACACATTAATTCTAAAACACTTGCAGAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01988.22	VIT1	32	242	1.40E-70

Gene family

Gene family	Subfamily
Transporter family	VIT

Gene Ontology

GO term	Description	Category
GO:0006880	intracellular sequestering of iron ion	Biological Process
GO:0071421	manganese ion transmembrane transport	Biological Process
GO:0034755	iron ion transmembrane transport	Biological Process
GO:0046872	metal ion binding	Molecular Function
GO:0042803	protein homodimerization activity	Molecular Function

InterPro

InterPro term	Description
IPR008217	Ccc1 family

trEMBL

trEMBL term	Description
A0A2Z6LH02	_

SwissProt

SwissProt term	Description
VIT1_ARATH	Vacuolar iron transporter 1

KEGG

KO	Description	Enzyme
K22736	vacuolar iron transporter family protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G01770	vacuolar iron transporter 1
Medicago sativa L.	MsG0480023952.01.T01	_
Oryza sativa L.	LOC_Os09g23300.1	integral membrane protein, putative, expressed
Cucumis sativus L.	Csa011350	_
Glycyrrhiza uralensis Fisch.	Glyur002759s00037154.1	_
Codonopsis lanceolata	Cl_chr01_31070T	_
Arachis hypogaea L.	AH03G43420.1	Vacuolar iron transporter 1 like

Expression pattern