Detail information of Am05G039520.1 Annotation
Gene IDAnnotation
Am05G039520.1 nucleoporin 155
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am05G039520.1mRNAChr05177165574177175004-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF08801.14Nucleoporin_N545435.00E-84
PF03177.17Nucleoporin_C87312922.00E-09
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0000972transcription-dependent tethering of RNA polymerase II gene DNA at nuclear peripheryBiological Process
GO:0050658RNA transportBiological Process
GO:0016020membraneCellular Component
GO:0072594establishment of protein localization to organelleBiological Process
GO:0006886intracellular protein transportBiological Process

InterPro
InterPro termDescription
IPR042538Nucleoporin, Nup155-like, C-terminal, subdomain 3
IPR042537Nucleoporin, Nup155-like, C-terminal, subdomain 2
IPR042533Nucleoporin, Nup155-like, C-terminal, subdomain 1
IPR004870Nucleoporin, Nup155-like
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminal
IPR007187Nucleoporin, Nup133/Nup155-like, C-terminal

trEMBL
trEMBL termDescription
A0A1S2YEP9 _

SwissProt
SwissProt termDescription
NU155_ARATHNuclear pore complex protein NUP155

KEGG
KODescriptionEnzyme
K14312nuclear pore complex protein Nup155

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G14850 nucleoporin 155
Medicago sativa L.MsG0480023940.01.T01 _
Oryza sativa L.LOC_Os06g20090.1NUP155, putative, expressed
Cucumis sativus L.Csa010560 _
Glycyrrhiza uralensis Fisch.Glyur000595s00018304.1 _
Codonopsis lanceolataCl_chr03_05910T _
Arachis hypogaea L.AH03G43270.1Nuclear pore complex protein NUP155 like

Expression pattern