Gene detail

Detail information of Am05G039370.1 Annotation

Gene ID	Annotation
Am05G039370.1	MMS ZWEI homologue 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G039370.1	mRNA	Chr05	176646141	176651420	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM05G039370.1
TGTCTTCTGGGTTCTTGGTCTAATTCATCTTACTCTGGTATTCTTATCTCAATTAACAGTCTCATGCTGGAAAAGTTGTAGAAAGGCACTGGTATGAGAAGAACAAGCATATATTTCCTGCTTCAAGATGGGAGGTACTGTCTTTCTTTCTTCCATAGTTCATATGCTGATCTTCATCTTCTTCTGCCTCATAACGTAGTATATTTATACAGGTTTTTGATAAATCAATAGAATCTTTTGAACTGGCATATTTATTATAACAGTCTGCTCAGTTTAGAGTGCTTATGTTGTTTAGCAGCTTAATACATAGCTTCTGATTTGATCAATTGTTTTAATCTTCTATTGCAGATATATGATCCAACGAGGAAATGGGAACGTTACACCATCCACGGGGATTGAGTTGAGCTGATTATGCCTCAAGTCACACCTTGATGGTGTTAGTTTGTTATAATGATTATATTATTATATTACAGTTTTGTTTGGTTGGCTGGGCATCTGAAAGTTTAGTCTTTATGATGCACCGAAAGGTTTAACTGATACCTGAGGGCAACCTTCTTCATTTTGATTGCCTTTCCAATGATCTTGTGATAATAGAATTGGAACAATCTTTGATGGATCCAGATTCACTGAAGTTATTTATGCTGTTGGAACATATCTGACGGATTGATCTAGATCACACAGTCAACATTTTAAGTTTGTTAAATCAGGTTAATATAGTATATAGTTGGAATGTAGACTATCAGATCTTTAATTGGATGGTCCAGATCGACTGCAACATGACTGCAGGACTTTTTACTGTCTTTGACAGATTTAGATCTGGTGCATTCAGCTGTTTCTATCTCTTTGTATTGGCATATAAAATGTTTTTTTCTTTTGAAAAATTAAATCAAGGGTAGTACAGAATCAGCCAATCAAGGGTTATGGAATAGGTGACTGCACTGACTGTATAATGTGGTTATGGTTACTGTTTTGTTTAATATTTTATTCTGCTAATAGATACACATACACTTGTGGTAGCAAGCTTGTTTGAAAAGAGTGATCATGCAAGCACACAAGAAACACGTTCATCCAAACTCAAAATTCGTATGGTACAACACACATTAGTAGTTTCACTAATGAAGCACCTATCGTAAAAACACATCTTGTGAGAAGAAAGTCAATAGGGGAAGTTAGAAGAGAGAAATAGCGAGGGTAGTGTGATATATGTTTGGTATGAAAGAAATTAAAGAGAAAAGTGATTTTTTTTCTCGTTTGTTAAATAGTAAGTAATAGCACTAATCGGCTAAATTGGTAGAAGACCGACAACAAGGGATTAGGGAGGTCATAGTTTTCTTAATTCTCCATAGGGACTTCTTGGGAACATCCCCGTATTTGGAAGATCATTTCATTGCTCTTGGTTTTCGTGGTAGAATAGGTAATGTTTCTTGGGTCAAGCATGCAAGGAACCATGGATTCACACTAATTTTTTTCCACCTGTATCTCGAATGGTGGAGTCCTTTTAAGATCCCGAGATTAGCCATCTTATGGTAGTGATGGCTTTTGCATGTTTTGGTGGTGCAAAAGTGTTTATAATTGGGAGAAATCTTTTACTTTACAAGCCGAATATGTAGGTTTGAAATAGGTCTAATTTAAATTTTAAGATGCTATTAGAGATTATACAAGATTCTTGGGCCACCAGCTAATGAGCCACTTGGGTCGTACTCTAATTGTCCAGTTTTCTATGGTTGAGTTAAGTCCATTTTAAATTATGAGACAAACGATGTTTTTAACTCTAAATATTATGATTATTTTTCAAATTATTTCATTTCAAATCATAAAACTATGCCATACTTGTTCCTTGAGATGTCAAATTGAGCTGTCCGACCTAGTCCAATAGGTCAAAAAGCAAAAGCAGGATGAATTGGGCCTGCCCAGTTATATATTGGGCCATGTTTATGCATTCCATCCCAGCTCAAAAAACTCGAGTAGTAGCAGGCTCGACCTAATCCATTTTTAACAAAGGAAACTAAAAAGTGTTAAAAAAAATAAAAGCCGTGCTCAGCGTGGTCCATAGGCCAACAGGGCAAAACAACCCAATGCCTTTATTTAGCAAGTCGAATCTAGAACACTTGGCCTTTTGGCCAAAATTAAGATCTCTACACTTCTACGTGTTACATTACATTAAGGTAATACAATGCTTAGTTTAAGGAGTTGAAATTTCAATTTAGTATGGTCATTTGCTTACCGCAGTTTTTGTAGTTTTTGTGGTGAAAATAACACCAACACTTTGAATTGTTTCACACCCATTTCTAATGATTGATTTGATAAGAAAAATAGTACTACAAGAGATATAGACATAGATGCAGTAAATAGTACTCCACCCGTTTTCATTTTATAAGTAAATGGTTGTTGGACGCATCTTTTAAGAAAGTGATAAAATTAAAAAAAAATAGAGGCAAAATCCTAAATTACCCCGACATTCCTTATATTTTTGGGTAAACTCGGGTACCCGACATTCCTTATATTAAAAGTTTTGAAAAAAGAAAACGTAAATATTTAATGGGGGCAATTTGGATAAATTAACTAAGAATAACTTTAATTTACTTATATTTAATAAAATATTTAGGTTTTTGCTTATATATAAAAACCGGGGTGTAATTTTTTTTTACCTTAAATGACAATTAATGTCGGACCGAGTTAATAGATATTTAGAGTTTTTTTGATAGATAGATATTTAGAGTTTGAAAATGAATATCATTAACCCATTTACTACGCTTCCATAAAAAAGAAATCATCTGGTACGTTGGCTATAATCTAATTTACTGTGCCGTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTATAAACAGCAACTTCGACTTAAGCCACAATAGTCTTTATTACGATCACGCTTTCGTCTTTCTTCCTCTCTCTTTCTGCCTAACTGTGATTTTCTCTCTCTAATATTCCAAAACCCTAGCCCTTCCAATTCATCCTCAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00179.29	UQ_con	41	133	1.90E-15

Gene family

Gene family	Subfamily
Ubiquitin Family	UEV

Gene Ontology

GO term	Description	Category
GO:0070534	protein K63-linked ubiquitination	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0016746	acyltransferase activity	Molecular Function
GO:0006301	postreplication repair	Biological Process
GO:0004839	ubiquitin activating enzyme activity	Molecular Function

InterPro

InterPro term	Description
IPR016135	Ubiquitin-conjugating enzyme/RWD-like
IPR000608	Ubiquitin-conjugating enzyme E2

trEMBL

trEMBL term	Description
A0AAN9MP42	_

SwissProt

SwissProt term	Description
UEV1B_ARATH	Ubiquitin-conjugating enzyme E2 variant 1B

KEGG

KO	Description	Enzyme
K10704	ubiquitin-conjugating enzyme E2 variant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G70660	MMS ZWEI homologue 2
Medicago sativa L.	MsG0480023928.01.T01	_
Oryza sativa L.	LOC_Os03g50440.1	ubiquitin-conjugating enzyme, putative, expressed
Cucumis sativus L.	Csa010748	_
Glycyrrhiza uralensis Fisch.	Glyur001406s00030096.1	_
Codonopsis lanceolata	Cl_chr01_31700T	_
Arachis hypogaea L.	AH13G45770.1	Ubiquitin-conjugating enzyme E2 variant 1B like

Expression pattern