Gene detail

Detail information of Am05G038910.1 Annotation

Gene ID	Annotation
Am05G038910.1	NSP (nuclear shuttle protein)-interacting GTPase

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G038910.1	mRNA	Chr05	175261141	175270122	-

Sequences

CDS:

>Am05G038910.1
ATGACAAGTCGATTAAAGGAAGATGAGAAAAATGAACGAATAATTCGAGGTCTTCTCAAACTTACGCCGAATCGAAGATGTATTAACTGCAACAGTGCGGGACCACAATATGTATGCACAAATTTCTGGACGTTTGTTTGCACAAACTGTAGTGGAATACACCGAGAGTTTACTCATCGAGTAAAATCAATTTCCATGGCTAAATTTACCGCACAAGAAGTTACTGCACTTCGAGAAGGAGGAAATCAGCTTGCAAAAGAAATATATTTTAAAGAATGGGATCCACAACGTCATTCTTTACCTGATCGCAGTAATGTTGACAGGCTCCGGGACTTTATTAAGCATGTTTATGTGGATAGGAGATTCACCGGTGAGAGGTCGTATGACAAACCTCCAAGAGTAAAGGGTGAAAGGGATGATTTCCATGAAGACAAGAGGTTGGAGACATATCAGGGAGGACGTAAAAGCCCTCCGTATGAAGACACATATGAACGTCGTTACAGTGACGGGTCTAGTTCTGGTGGAAGAAGTCCTGAGTATGATCAAGAAAGGAAATACAGTGATTATAAGAGAAGCCCCGGTCGTCCTCCAATAATCAATGATTGGCGGCGTGAGGATAGATTTGGGGATGGACGGAAATTTGAAGATCATAGAGTATCTGATGGAGATAATAAGGTGGAAAGCCAATCTCCTGAACGGGCCAACGATCTGGATTCTTCAAGCCCACCTGTGGTTCGACCTGTTAGAGATATTTTGGGAGAAAATGTAGTACCTCTTCGAATTAGTGAACCCCCCAAGGCGAACAGTAGACAAGCTACTAATGGCTCAACACTCACACAGAGAACGTCATCTTCCAGTAGCTTGGCATCCAGCAATGGAACCCCAGCAGAAGTTCAGCTGGGGACTACTAAGAGCCTTATTGATTTTGATGATGATCCCGAACCACCTATTGCTCCAGCAGTTCCTCAAGTCCAACAAACAACTGCGGCTCAACTTGTGAGTCCAACAAATTTTGGTGATAACAACTGGGCCTCTTTTGATGTTGCTCCTGAGGTAAAAGCATTTCAGGGTCCTTCAAATGTAAATCCACTTGAATCCATGCTGTCCCAATTGTCAGTTCCAGCATTCGTACCTGCTCAAGTTTCTGGAGCCCAAGGGTCTGTGGCAGGATCAGCTCTTACTGCTACTGCTGCTGGAGCTCCAACTGTGAGCAGCTTCTCGACATTCCCAGCCAGTGTTACTTCATTAACTTCTGGATCAACAATGTCATCACCTCACAATAATGTGGGCCCATGGGCTAGTTTGCAGCATCAGGAACCTTTCTTCAGAGCTACTGTTAGTCAGCCTACTATTCAACAATCTATACCACCGGGAGATTTGAGTAATCAGGGGCATCCAAGCATACCAATGCCAGTGCCACACTTATCAAAGGTTGTCAATGAGGATAAATCCAGTGTTGTTTCCCAACCTTCGACTGTAGACATAAAACCAATTGGAAGAAATGAACTTCCTGAGGATCTATTCACTGTGAAGTATTCATCCTTTCCCACTACAGTCCCAGGTTGGCAATTGGGTGCACCACCTGGCATGGGTATCTCAGTTCAATATAATAATTTGGCGCCCGTGCCAAATTTTCCACAACTGTCAAAATCAACAAATCCATTTGATGTGAGCAATGAACCACCTCCAGTTCAAGCCCCAACTTTTCCTTCCATGTCATCTCTGCAAGGTGCTTTGCCTAGTGTAACACCTTCAGCTACAGCGCACCCTTCAAACATGGGCAATCTACCTCTTTCCTGGAATCCACCCTTGTCAGCATCATACGCGTCAATGCTTCCTATACAAGCACAAACTCTTGCCTCAGCAATGGGACCAAGGGGATGCATGGAACAACAAATTCCAACCAATGTGCCAATCCTAAGGCATCAAGAAATTGGTATTTCTGGTACCGAGGGAACTGCTTTTGGCTTCTCTAATTTAGATCAGCAGCTGACTGGTAGCTTATCAACCTCTACTACCTCAAACCCCTTTCCTGCAGGAGGGAATCCATTCGGATGA

Protein:

Promoter(3k):

>AM05G038910.1
CCCAGAGCTCTTTTTCAAGAAAGGTGGAAAATGAATTTTCTAATCTGTTTTTCAAGTGCAACTCGAAACTGTTTATGTAGGCTTTAAGAAAATAGCTGTTAGAGACATAGGCTCCAGCAATCAATAGCCAGTTAAAAACCGTTTTAAAATCAATTGTAATCAAAAGGTTTAACTCTGCGGTTACGGAATAAATGGGTTTAAAAGAAAAGGAGCCGTTGGAAGGAACTGACAGTTACAAAATAGAGGAAATTAAGTTTCAGTTTTTCGACCAAATCATTTCACCAGTCAGTTCGACCAAATCATTTCACCAGTCAGTTCGACCAAAACTGGGAAGGACATCTGTAACTCATTTCGATCAAAACTGAGAAGGATATTCTGTGTCGAAAATATTTGTCCTTGTCGAAATGTTATTGTTTCACAAAAATCATTTAGAAATTTTGAAATATCACAAAATTTACAACACAATCATATAGATTAATTTGAATTTACAAAAGATCACTATTGAAAGAGTCGCTTGGAAATGACCAACTATTTTTGGTGTTTCCTTATGCGCCATTTGAAAAGATAAAAACTCCCTTGTCTTTCCTCAGCATACTGAGACGAGTACTCATATTCTTCAGAGAATTATAAATCAAGTGCACTAGATTGGTAAGGAGTTTTCTTATCCTCTTGCGTTTATAGTTGACCATACCTATAAATCCAACTTACATTGGTAGCCTCCTTTGAGTGGCTATGTTAAAACTAATACTGATTGACCATATTCCTCTTGTGGCGGCGTCATTATAGATGATGAGGATCATTTTTTGAAAAGTTTCGCCTGTAAACTAACGCTTAGTAATGCTTTATTCGCAAAGTTTTGGGGCTTCCTCATCGACTCAAAACTTGGATTTCACTCATGTCATCCTTGAAACAGATTCATGATAGAATCGCTCATTCTCCACACCTTCATCATTTGCTAGACGAGGTAATTCAACTTCCTTAGTTTTCTTGGCTGTTTGGTGTCTATCAATCACATTCTCATGGAAACTAATTTGTATGTTTTAGACATTCCCCCCGGTCTTTGTATTAGCTCTACAAGGGTAGTCTGCCAAATTTAATTTGCACGTGTTAGATGTCCCCCCTCCATAGTCTTTATCTTTCTTTTGTTAGCAATCAATAAAAGGGGTAGGTTGCTCCCAATGTGTCGTTGTGTAAGCTTGTTAGCCATCCTTATTTTGTTTTTATATAAAAATGGATTAATTTTTATATATGACAATAAAAATGAAGCCTTCTACTAAAAAGGAAGTCGATGATGCTCTACTTAGTTTTCTTTTAGTAGAAGGCTTCATTTTTGTTCTCATATATAAAAATTAATCCATTTTTATAAGTTAAAATATTATTATAAAGTTAAAATTTAAAAATAACAGCTTAAAAACAAAAAAATAAAGCTAGTTATTATTTTTTATATTTTAAGTTAAAAACTACTTTCAAATGCATTCTATTGTAATATTTTTAATATTATCAGTTAACTCTTATTTTTTTTTGCTATTATTATTATTATTATTATTAACTTTTATTTTTTTATAACCCAAACAATCAAGTTAAGGACTAAAAATATTTCTTAAAATATGTCACTTTATTATTTTTTATATCATTTACCTATTTATTCCGGTCAAAAAATTCGTTTACCTATTTATTTGTTTCTTACAATGTTATCATTCTCCGTTTTTATTTATTTATCTCTCTCTCTCTATATATATATATATATATATATTATGAATGTTTATATGAGTAGCTATTAGAGTAATATTTTTCACTGGTTTGTGAACCATTCATAACAAAAATGAGTTCTCTACCTTAATGACGGAAAAATACACTTATTTTTAGGTGATTTTAATCATAAAAAAGAAGAGATAACGAAGAAAAATATGGAGGAAAAAGATAATAGAAAAAAAATGAGAGATAAAAGTTTCAGTTTATTGAAATTTATATATACCAATAGTGAACTTTTATCGTTGATAGAAGCATGCCATAATAGAAATTTCAAATTAGAATAGACATTTGTCAAAAAAAAAGGAAATTAGAATAGACTTTTTTTTAACCAATACTGTTGTTGGTCTAGTGGCTTAGTCTATTCTAAAATATAGGTGTTCGACTCGGTGCTCCCGGATTCGATTCCCGGTTCGTCCTAAGCAAATACAAGAAAATTAGCAAAGACTAGACGACGTCACACCCACCATGTACGATGAACGGCCTTTTTTTTGACAAGATATGAACGGTCTTAACATTACAAATAAAATATTAACCGTCAAATAAATTGTTATTCAAATCAAACTTTCCTTTACTATTCTCTCTCTTTTCTCGCCGTTTCTTCACTCTTTCGCGGTGTTTGGCTTAAACATCTATCATATATAGCTGTACAAAGCCGTAATTTACCAACTCAGAAAGATCTGCTACTCTCTCTCTCTCTTTCTGGTTGCGGTGGTCAGTGTGGTGGATCTCTTTTGTTGACCGTCATCGTCAGCTTAAGAAAAAAGCTGCACAATTCGAAGGCACAAAAACACTTTTTCTTCATCTGCTGCAAAATCAGGTCTCTTCTCATTTCACTCTATCGTCAACTTTTCTCTTTTTGTAACTTTTAGGGTTCAAAACAATTTCGACTTCAAAAGATCACCTGCACGCTTTCTTCATCTCCTTAGGCAAGTGTTTGATCCTCAGATCTGGTGTTTTTGCTTTCTTGTTCAATTCGCGTGCTGCTTGCATTGGTCGCCCGTCCAGTTACTGCGATAATCGTTGCCAGAACTCAAAGTTCATGTTTTTTTTTTATTATTTCTTGTTCCGGCACATTCTAGAATCTAGGCGCATTGTGTGGAGCTGAACGCGGTTGATCATGATTTCGGATGAAAGCATTAGAAGTTTTAGTTCATTTCTCTGTTGCTTTTGGAGCAATCTGATTAAGTTTTGATAGTGAATTGTCAATTGCTGATACTCTGTGTTGTGATGTGTGTAACAGAAGCAGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01412.21	ArfGap	13	124	3.70E-26

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0009615	response to virus	Biological Process
GO:0005737	cytoplasm	Cellular Component
GO:0006913	nucleocytoplasmic transport	Biological Process
GO:0003924	GTPase activity	Molecular Function
GO:0005525	GTP binding	Molecular Function

InterPro

InterPro term	Description
IPR037278	ARFGAP/RecO-like zinc finger
IPR038508	ArfGAP domain superfamily
IPR001164	Arf GTPase activating protein
IPR044820	ADP-ribosylation factor GTPase-activating protein AGD14-like

trEMBL

trEMBL term	Description
A0A1S2Z0H6	_

SwissProt

SwissProt term	Description
AGD14_ARATH	Probable ADP-ribosylation factor GTPase-activating protein AGD14

KEGG

KO	Description	Enzyme
K15044	Arf-GAP domain and FG repeats-containing protein 1

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G13350	NSP (nuclear shuttle protein)-interacting GTPase
Medicago sativa L.	MsG0680032510.01.T01	_
Oryza sativa L.	LOC_Os02g11820.2	GTPase-activating protein, putative, expressed
Cucumis sativus L.	Csa006873	_
Glycyrrhiza uralensis Fisch.	Glyur000602s00018897.1	_
Codonopsis lanceolata	Cl_chr03_01500T	_
Arachis hypogaea L.	AH05G26770.2	Probable ADP-ribosylation factor GTPase-activating protein AGD14 like

Expression pattern