Gene detail

Detail information of Am05G038670.1 Annotation

Gene ID	Annotation
Am05G038670.1	CDK-activating kinase 1AT

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G038670.1	mRNA	Chr05	174638595	174641897	+

Sequences

CDS:

>Am05G038670.1
ATGGCGACAGAGAGAGATACAGAGAGGGAGCGTGCACCCAAGAGTTGGAGCATCCACACCCGATCCGAAATCATCACCAAGTACCAGGTCATGGACCGTATCGGCTCCGGTGCTTACGCCGACGTCTACCGTGGCCGTCGTCTCTCCGACGACCTAACGGTTGCTCTTAAGGAAATTCACGACTACCAATCTGCATTCCGAGAAATCGAGGCGTTGCAGATGCTGCAGGGCTCTCCAAACGTCGTCGTCTTGCACGAGTACTTCTGGCGCGAAGATGAGGACGCCGTTCTCGTTCTCGAGTATCTCCCCACTGACTTGGCCACCGTCATCGCCGACGCCGCCAAGGAATGTCTCCCTCTCCCTGTTGGTGAGATGAAGCGTTGGATGATTCAGATTCTCTCCGGCCTTGACGCCTGTCATCGGAGTATGATCGTCCATCGTGACTTGAAACCCTCTAATCTCTTGATTTCCGATCGTGGTATTCTCAAATTGGCTGATTTTGGACAGGCAAGGATACTCACAGAACCTGGATTTGATGCTTCCGAGGAGAACCCACCGCCATTTGAGCATGATGCTTGTAATAACGAAAATTCAGTTGATCATCTCGAATCTTTTCCTCAGACAGACAATTTAAGCCAATTGGGATGTGGAAGTCAAGGGCAGGGACCCATTTTTCATGAGGACTATTTTAGTGTTTTAGATGAGCTAAAAACAAAGAGCTCTGCAGATGACATTGATAAGGATACATCTTGTCTTGCAACGTGCACAACAAGTGACATGGATAACGATCCTATGGGAACTTCTTTTAGTTACGAAGCAATGGAGGGAGAAGATAAAGAACATGGTTGTCTCACGTCATGTGTTGGAACTCGTTGGTTCAGGGCTCCTGAGTTGCTTTATGGATCCACAAGTTATGGTTTAGAGATTGATCTCTGGTCACTTGGATGTATTTTTGCTGAGCTCTTAACTCTGAAGCCCTTATTTCCGGGAACGGCTGATATTGATCAGCTCAGCAGGATTATTAATGTTTTGGGCAACCTTGATGAGAGAGCTTGGTCCGGTTGTTCAAAACTTCCTGATTATGGAATAATCTCCTTTAGCAAGGTAGAAAACCCTCCTGGCCTTGAGGCCTGCCTGCCAAACTGCTCACCCGATGAAATTTCTCTAGTAAAAAGTCTGGTTTGTTATGACCCGGACAGGAGGGCTACAACAATGGAACTTCTCCACGACAAGTACTTTAATGAAGAACCTCTTCCAGTTCCTGTTTCTGAGTTGCGAGTTCCTTCGACCAGAAAAAGAGAAGATGAGGACTCTGTTGGTGGGTGGCATGATTACAATGACATGGGTTCTGATTCTGATTTTGATGACTTTGGCCCTATGAATATCACCAGAACTGGTACCGGTTTCTCCATACAGTTTCCTTGA

Protein:

Promoter(3k):

>AM05G038670.1
TTGATTGTCCTAGGTTCTTGAACAAGGCTTGCATGATCAAGAGCAAAGAAAAAGATCTAGACTCTTATGGGATGCCAAATGACCCATGGAGTTTATGTACAGTAAGACAAGTAGAAGAATTAAAAGCAGTTATCAAGGTCCTTCCACTTTGGTCCACTGGCATCACAATAGCCATTACAATAAGCCAACAATCATTTTCAGTAGTCCAAGCAAGCACAATGAACAGAATAGTGCACAATTTTGAAATTCCACCAACAAGTTTTGGTGCCTTTGGAATCCTCACATTAACCATATGGGTGTGCCTTTATGACCGCATAATAGTTCCCTTATTTTCAAAGTACACCAAAAAAGGAAAAGGACTCACACTAAAGCAAAGAATGGGAATTGGAATAGCACTCTCATGTTTAGCCACAGCAATAGCAGCATTAGTAGAGAGAAAAAGAAGAAATGAAGCAATAATTGAAGGGTTTATAAATAATCCTAAAGGGGTAGTGAACATGTCAGCAATGTGGCTAGTTCCTCAACATTGTTTAGTTGGTTTAGCTGAGGCTTTAAATGTCATTGGACAAATTGAGTTTTATTATTCTCAGTTTCCTAAAACTATGTCTAGTATTGCTGTAGCACTTTTTCCTCTTGGTTTTGGTGTAGGGAATTTGATTGCTAGTCTTATTGTGAAGGTTGTTAAAGATGGGACACATAGAGGAGGAGAAGTTAGTTGGCTATCTTCAAATATCAACCAAGGGCACTATGATTATTACTATTGGATTCTCACTATTCTGAGTTTGGTTAATTTGTTTTACTTCTTCTTTTGTAGTTGGGCTTATGGGAGTATTGAAGATATAAAAATTTGGGATGATGTGGCTGACACAAAATATGAGGAGGGCAAGATCTAGTTTAAATCAAACAAAGGGGTTCTTAATTGTGTATTTTTCTATGATTATTGTATTGCTAAGCTTCTTTCTTTTCCTTGGTAGTAACAAGTTTGCCTTTGCTTGGTTACAAGGTGGCAAATAGTTTTTTTATTTTTTATTTTTTATTTTTTATGTTAGAAATGGATGAATGCTTATAAAACTTGTACATAGACAAGGGTCAGCAGGAATCACTGTCAGGGTGATCCAATTGAGAAAGAAAACCATGAACGTATAGTTTTTTTTATAGTTCAAAAAAATACTTCAAAGTTAAATTTAAGCTATTTTAAAATAGGTTAAGTTAATTTTTATTCTGAAAATCAAGTTAATCAAATTTAAAAATTATGGAACAACTTTTGAGGTTTATAATTTAGAGTTTTTTTTGTTCCTTAGTATAAACCGTTGGGGATAGAGGAAAGGTAAAGGGAAAAGTGGAGCACTCCAGATTTGAACTCGTGTTTCAACGCTTTCGATGTCCATATAAAACATAGGCTAAATAGCACTTTTGGTCCTTTATCTTTGCTCCAAATTTCACTTTGGTCCTTTCACTTTGGTCCGTTTTATTTATAATAACGTGAGGGACCAAAATGAAACGAAAATGAAAGATAAAGGACCAAAACGGACCCAAAAAAAGATAAATGACCAAAGTGAAACAAAAATGAAAGATAAAGGACCAAAACGGACCAAAAAAAAGATAAAGGACCAAAGTGAAATTTGGAGCAAAGATAAAGGACCAAAAGTGCTATTTAGCCTAAAACATACTTATGTTTTACCACTCGCCTCCTAACTTATGTTGATGTTCATTTTTTGTCCCTAAAATTTAAAAAATATCTTTTATTGTCTCCAATGTCTTAAAATACTACAATTAGTCATCTTTAATTTATTTTAGTCCCTCTAATGCATATTTTTCTATTTTAGCACGTGTAAAGCTTTATTTATAGTCAATTAGTCTTTTCCGCGATAGCATGGTCTAGTGGTAAAACACACGTAAGCGCTATGTGTATCTTAGGAGGTATACTCCACTTCTCCCTCCCCATCCCCACCTCTTGACCGTTTGTACTACGAACCCCAAAAAATACTCCATTGGTCCATGCATATGATAGAAAATAAAATAAAAGAAACAGGACTAAAATGTGAAAAAGTATATTATAAAAACTAAATCAAAATAACAAAGACCAATTGTAACATATTTCAAGATATTGGAGGAGAAAAAAATTCTTTTTAAACTTCAAGGAACATAATCAAGAAAGGCAAGCTTCATTCATAGAAATTTTGTGGAGCATTTGTAAAGCAAGGAATGATAAACTTTGAGAGAATAAGCTTCACCCTGTTACCCTGTTGCTTGAATCGCATTAGAACACCATGATAATTTATATATTATTCTATGGATTACATACAATAGATTATTCTTCTTTTAATATTAGATTATATATTATTTTATGGATTTAATTTATATATATTGTCGATGTATAAATATTTCACACCATCTGAGTCACTTCATAAACATCTGATATGTTATCTATACCATGAATTGTAATTGATTGTGAGTGTAAAAGAATTTACACGAAATATGCGTAGCTATTAAACTCTTTTCTATTATATATTTTAAATAAATTAATAAATAATAATATGATATATTTTATGTATAAATGACAAAACTACTCTTATGATAAAATCATATTATTTTTAAAATTTAATTTTAATATCAAGTTTTTTTAATGTTTTTTATTTTAATATTTTTAACTATAAATGGGAAAGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAAATTTAAATTATATTGTAAAGAAATTATTTTCTTATTTGATAGTTTTTTTTTTGACAACTTATTCCATAGCATTTGATAGTATTATTTTCTAGTCATACTTAGGAAATAGGATATGATTTTGTCAAAGAAAAGAAATAGGATATGATTTATTTATTTTTACAATAATATGATACTACTTATTCGTTGTTCGATAAAGATTAGATGAGCTAAAAGAAAAAGGCAAGCAGAGGCACTAAGATTGTGACGTTGGTGAGGCGGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	28	176	1.00E-55
PF00069.28	Pkinase	281	413	1.00E-55
PF07714.20	PK_Tyr_Ser-Thr	30	173	1.50E-18

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.5.2:CMGC_CDK-CCRK

Gene Ontology

GO term	Description	Category
GO:0051301	cell division	Biological Process
GO:0097472	cyclin-dependent protein kinase activity	Molecular Function
GO:0106310	protein serine kinase activity	Molecular Function
GO:0003924	GTPase activity	Molecular Function
GO:0005525	GTP binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
A0A1S2YF97	_

SwissProt

SwissProt term	Description
CDKF1_ARATH	Cyclin-dependent kinase F-1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G28980	CDK-activating kinase 1AT
Medicago sativa L.	MsG0480023839.01.T01	_
Oryza sativa L.	LOC_Os06g22820.1	cyclin-dependent kinase F-1, putative, expressed
Cucumis sativus L.	Csa006577	_
Glycyrrhiza uralensis Fisch.	Glyur000357s00018131.1	_
Codonopsis lanceolata	Cl_chr05_05290T	_
Arachis hypogaea L.	AH12G02370.1	Cyclin-dependent kinase F-1 like

Expression pattern