Gene detail

Detail information of Am05G038090.1 Annotation

Gene ID	Annotation
Am05G038090.1	leucine-rich repeat transmembrane protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G038090.1	mRNA	Chr05	173402980	173411436	-

Sequences

CDS:

>Am05G038090.1
ATGGACTTCTTATTTGCGCTATTGCTACTGGCTTGCTTGTGTTCTTTTGTGTTGCCTGATTCGCAAGGAGATGCACTGTATGCACTGAAGTTATCACTCAATGCTTCAGCTAGCCAGCTTAATGACTGGAATGATAATCAAGTGAATCCTTGTACTTGGTCACGTGTATACTGTGACACAAGCTACAATGTTATTCAAGTTTCACTGGCAATGATGGGATTCACAGGACACTTGACCCCAAGAATAGCTGCTCTAAAAAATATCACAACTCTGTCTTTGCAAGGGAATGGCATCACTGGTGGCATACCAAAAGAGTTAGGAAACCTGACAAGCTTGACCAGTTTGGATTTGGGAAACAACAGATTAACTGGTGAAATACCATCTTCCCTCGGTAACCTCAAAAAGCTCCAATTCTTGACATTGAGTCAAAACAATCTCAGTGGGACAATTCCTGAATCACTTGCCAGTCTTTCAGGCTTGACCAATATCCTGCTCGATTCCAATAATCTTAGTGGCCAAATTCCGGAGCGCTTATTTGGAGTTCCTAAATTCAATTTCAGTGGAAATAAGTTGTATTGTGGTGTGAATTATCGGCAACCTTGTGCTTCAAATAATGCAGATCAAGGTTCATCACATAAACCAAAAACTGGCCTCATAATTGGAATTATCATAGGGTCAGTAGTTATCCTTTTTATTGGGGGTACGCTGTTCTTTTGGTGCAAGTTTAGGCACAAGGGCTACAGGAGTGAAGTTTTTGTAGATGTTGCAGGTGAAGTTGATCGGAGAATTGCATTTGGTCAACTAAAAAGATTTGCATGGAGAGAACTGCAAATTGCTACCGATAACTTCAGTGAGAAAAATGTTTTAGGACAGGGAGGCTTTGGAAAGGTATATAAAGGTGTTCTTGCTGATAACTCAAAAGTTGCTGTCAAAAGATTAACTGATTATGAAAGCCCGGGGGGAGATGCAGCCTTCCAGCGTGAAGTTGAGATGATAAGTGTAGCTGTGCATAGGAACCTGTTACGGCTGATTGGGTTTTGTACTACTCCAACTGAGCGCCTCTTAGTTTACCCATTCATGCAGAACTTAAGTGTTGCATATCGTCTACGAGAAATCAAACCCGGGGAATCTGTTTTGGATTGGCCTACAAGAAAACGAGTGGCTTTAGGAACAGCCCGTGGTCTAGAATATCTTCACGAGCATTGCAATCCTAAGATTATTCATCGGGATGTGAAGGCAGCTAATGTATTACTAGATGAAGATTTTGAGGCAGTGGTTGGCGACTTTGGTTTGGCAAAGCTGGTAGATATTCGAAAGACTAATGTGACAACTCAAGTTCGCGGGACAATGGGCCACATAGCTCCTGAATATTTGTCGACTGGAAAGTCTTCAGAAAGGACTGATGTGTTTGGTTATGGGATTATGCTTTTGGAGATTGTTACAGGTCAAAGGGCAATTGACTTTTCACGTTTGGAAGAGGAAGATGATGTGCTACTGCTTGACCATGTTAAGAAATTAGAACGAGAGAAAAGACTAGATGCTATTGTTGATCGCAACCTAAATAAAAATTACAACAAACAAGAGGTTGAAACAATGATAAAAGTTGCTTTGCTCTGCACTCAAGCAACGCCAGAGGAACGTCCACTGATGTCGGAGGTTGTAAGAATGCTAGAAGGAGAAGGGTTGGCTGAAAGGTGGGAGGAATGGCAGCATGTGGAGGTCCATCGGAGGCAAGAATATGAGAGATTACAAAGAAGATTCGACTGGGGAGAAGATTCGATTCATAATCAAGATGCCATTGAGTTGTCAGGTGGGAGATGA

Protein:

Promoter(3k):

>AM05G038090.1
TTATTATTATTTTTGCACAGATGACGATAGGCTAAATAAATAACAATAGCGACACAAAATAAAACGAGCATCAAACAAATCGTTACACGAGAGTGCCAGAGACGCGCGCGTCTAAAGCGATACATGACGCAACGAGAATACGAGTTTTTTTTGGATTTTAATTGATCAGACAAAATTAGGGTATGACACCCGCGAATGGCTTCCAACAAATTTTGTGATGTTTTTCGGCGAAAGATACTCTAACCTTCGTGCCATTTATATTTCTTAAATCTCCCTTTTCTCTCATCCTTCTTTTTCTCATAGGCACCATTTTCATCATATTTTTGCCTAAAGTTAGATTTTGTTTGAAAATAAAACCCAGATAGCGGATAAGCTATTGGATAGCTCATAAACTAGCTTATAGCGAATAACTGATGGTGGATGAGCTAGCAGATTAAATTTAAAGTGTTTGGTAAAATTAACGGTTGAACTAGCTTATAGATGTAAAATAATATAAATGGACATTTGTATATAATGTCAAAAGATGAGAGAGAATATTCATTTAATGGATGATAAATGAGGGATTTAATTAAAATAATAAGGGTAAAAATTGAAGAAAATATGAAACACTATAAGCTATACACTAAAATGCTACTTCTAGTAGCATTTTAAAAATGCTATAAGCTAGTGAAAAATGCTATAAGCTAGTCATGTCAAACACCTACAACGAGCTTATCCGCTATAAGCTAACAGATTGACTAATTTATAGCATTTTTTCGAACGAAACTTGAAGTAACGTTTGAGCTTTTAGCATATATCGTTTTACTTTTTCTCTAATTTCTACCTTTATTATTTTCATTAAATTCATCATTTATCCTCTACTACATGAATATTCTCTCATTTTGAAACATTATTTATGAAGTTTCATTTATGTAAATTTATATTGATAACCGAGTTCAATCGATAATTTTACCAAATATTTTAAATTAAATTCATTAACTTATTTGCTGTCGATCAATTATGAGCTTATCCACTCATCGAAAAAAAAACCATGAGTTTATCCGCCGTAAGCTATTTTTTTTACCAAAGAGAAGCATAGTAGCATTACTTCATTTTGAAATAATAAATCAACAATTTAAAAAATGTACCGGTTCTTCTAAAAAAAAAGAACTCTATCTGTTTTCATATATAAGCAAATTGCGGCTACACACGTGTTTTAAGAAAAGCTTGAAAAAGAAATATTGTTCCTAAAATGCCCATATTTATTCTTGCATTGATAAAAACAAAAGTAGTGTAATAATTTTTTTTTTTCATTAAAAATAGTAAAAAAAGTATAATAAATAGGGGTAAAATTAAAATATTAAATAAAAAAACTTTGACTTGCTTATATTTAATATTTAATAAAAAAAAAGTGGGTATTTTTGCTTATTATAACAAAGGGAATACCGGCTATCTTTTTAACGTGCACTTTTCACACTGATTCCCAAATTTATCCTGATATTTAAAATGGATGGCCTTTTCTCCAACTTCCAACCAGGCAACCAACCATAGAAGCAAGAGCGAGACCGCAGTCCAATCGAAGAGAGAGAGAGAGAGTGGGCCAATAATCTAATCATATTCATCGCAACTTGCTGTTCACTCTTTTTTTAATTGCAATTCTCTTTGGCGTAACCAAACAATAGATTAGAAATTCGTCAGTTCCGTTCAGTCTGGTAAAGTAGCAAAACAACAATATCACTTTTTTTTTATTATTATTACAAAAAAACAAAAATAAGCAAAGTAAAAGAAAGGAAGAAGAAAAGGCATAATAGATAGAATAGAAGGTTCGCCCACTCTGCCAGCTATCTCATTCTCATCTCACCGTAATGTTGTTGTATGTAATCTGAGTCTCTCTCCTTCTTCATCTCTGCAACTTGCTTTATCTATCAGCTACTAAACGCGATTCTTCTACCTGATTCCGATTTTTAGTTTATTAAGTGTTGGTTGGTGTTCTGCTTTTTTGACCCCTACGCATTATTAGTTTTTTACTGTCTACTTGATTAGATCCCCCCTTTCTGTTCCCTGATTTTGCCTTAATTCAATTGAAGTTTCTGGAATTTTTCTTTCTCTCTTTTTGGTTGAATAGTAGTGTTTCTTCTGTAGCTTATCCAAAAAAAAAAGCAACAGTGTTTTCTGTTAAGAAGCTTATTTGTGAATGTTTAGTTTATACGAACTTCTATTGCCTTCAATTGAACTCCGAATGCGGTTTTTTCTTATTGTTTATGAATAAATCCTGCAAGATTCTTTGGGTGGGAGTGGGATTTGGCGGTGCTTTTTTCCTTCTTCTCGGATATATCGAAATTGGCAACAACAATAAGAATGAAAGCACATTTGGTGATTTACAATTATTTCTGTACATTATTTTTTCTGGTTGTTAGATTGAGACTGATTGAGTTTTTTTAGATCACCTTTCCTCACATTAATTAGATTTTTAGCTTGATCAGAACAGAATGAAATAGAAAGGGTTCCCTTATGCTCTCCTTAAAACATGTTCCGGTTTGTTCTCTTTTTAAAGTGCAACAAACATAGAAATGAGTACATGTCCTTTTCTTTTGTGTCCCATTTTAAGACGGACCAAGATTTGCTGCAGTCAAGGGTTTTTGTAGTCACTGCTATCAAGAGACCATGAGCCGTAAAAATTGGGGAAAATGGAATTAGAGAGAGATTGAGACAAATGAATGTAGAGAATCTGCATCCATTTAACACGTGTCTCGAAAACACACTATTCCTATTTCCTTAGATAGACTCAACTAAGCAACTGTATAGTTGATCATAAATACCTCATTGCAGTAAACTTGTTTTCACTGTTCTAGTAGTTTGTTTCGTATTGTTTATCTTTAATATTGTATTTATTGTTAATTGTTAATATTCAATTTTCCAGCTTAATGGCTATGTTGATTCGGCACTGCAGTGTTGGAGATTGCTTGTGTGCTATTTGATTATCACAGTCATTGTGTCAGTGGTTGATGCCAACCAGTATAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	284	555	1.30E-43
PF07714.20	PK_Tyr_Ser-Thr	286	557	9.60E-42
PF12799.10	LRR_4	86	124	2.50E-10
PF12799.10	LRR_4	110	150	2.50E-10
PF13855.9	LRR_8	111	170	3.30E-10
PF08263.15	LRRNT_2	19	59	3.70E-10

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.12.2:RLK-Pelle_LRR-II

Gene Ontology

GO term	Description	Category
GO:0016020	membrane	Cellular Component
GO:0006952	defense response	Biological Process
GO:0051707	response to other organism	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0106310	protein serine kinase activity	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0AAN9MV62	_

SwissProt

SwissProt term	Description
Y5129_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At5g10290

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G10290	leucine-rich repeat transmembrane protein kinase family protein
Medicago sativa L.	MsG0480023308.01.T01	_
Oryza sativa L.	LOC_Os03g49620.5	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
Cucumis sativus L.	Csa016628	_
Glycyrrhiza uralensis Fisch.	Glyur000779s00022837.1	_
Codonopsis lanceolata	Cl_chr01_37590T	_
Arachis hypogaea L.	AH13G47710.2	Probable LRR receptor-like serine/threonine-protein kinase At5g10290 like

Expression pattern