| Gene ID | Annotation |
|---|---|
| Am05G037280.1 | Small nuclear ribonucleoprotein family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G037280.1 | mRNA | Chr05 | 171985650 | 171988260 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01423.25 | LSM | 11 | 74 | 1.00E-15 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0005685 | U1 snRNP | Cellular Component |
| GO:0071011 | precatalytic spliceosome | Cellular Component |
| GO:0071013 | catalytic step 2 spliceosome | Cellular Component |
| GO:0097526 | spliceosomal tri-snRNP complex | Cellular Component |
| GO:0005829 | cytosol | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR034099 | Small nuclear ribonucleoprotein Sm D3 |
| IPR001163 | Sm domain, eukaryotic/archaea-type |
| IPR047575 | Sm domain |
| IPR010920 | LSM domain superfamily |
| IPR027141 | Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3 |
| trEMBL term | Description |
|---|---|
| A0A4D6L8N8 | _ |
| SwissProt term | Description |
|---|---|
| SMD3B_ARATH | Small nuclear ribonucleoprotein SmD3b |
| KO | Description | Enzyme |
|---|---|---|
| K11088 | small nuclear ribonucleoprotein D3 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G20580 | Small nuclear ribonucleoprotein family protein |
| Medicago sativa L. | MsG0480023399.01.T01 | _ |
| Oryza sativa L. | LOC_Os02g01250.1 | LSM domain containing protein, expressed |
| Cucumis sativus L. | Csa014899 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000048s00002260.1 | _ |
| Codonopsis lanceolata | Cl_chr01_29500T | _ |
| Arachis hypogaea L. | AH12G22890.1 | Small nuclear ribonucleoprotein SmD3b like |