Gene detail

Detail information of Am05G037140.1 Annotation

Gene ID	Annotation
Am05G037140.1	Transducin/WD40 repeat-like superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G037140.1	mRNA	Chr05	171726584	171733489	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM05G037140.1
ATGAAGCCTCAGGTATGTCACTTGCCATAAGACAAACAACATTTGCGACTTCCTCTTCTTCATCTGTATCACCATCAGTATCTGTGTTGCATTCATGACTTACTTTTGTTTGTACTTGGATTTTAGCTTTGGACAATTTACTTTGAGATGACCCGGTTTGTTGCATTCAAAACATTTTGGTTGATCATCTCTTTTCTCATAACTGTCTTCTTTGTTGTACCCAGATTTCTTTGAATAGTCACCCTTTCCAAGCTTGTTGAGTCTCATGAATTTTTTGAATTTCTTGGCAAACATAGACATGTCTTCATCATCAGATTCTTCATTAGACCCAACCTCTTTCCTTATCACCTTAGGAGTTTTAGCAGCAAGAGCAAGAGACTTTCTTTCTTTGACCACTTCTTTTTCTTGAGCCTTCTTAGCGGTCAACACCGCCTCAAATGCAAGAAGTGACCCAATCAAGTCTTCTTGAGGTAAAGTGCCAATATCTTTGGCTTCAGTGATAGCACAAGTCTTAGGAAAGAATTCACTAGTCAAGGATGCAAGAATCTTCCCATTCAAATATTTTGTTGAATATTTCTTCCCAAGAGCTCTCAAGTTATTCACTATTAAATTTAATATTTGGTGCATAGCAGCAACAGATTCACCTTCCTTCATTTTGAAAGCTTCATACTCAGAAGTGAGAATTCTAATTTTTGTATCATTCACTTGACTTGTACCAACATGAGTCGCTTCCAAACAGTCCCAAATTTCTTTAGCTGTCTGACAACCTTTTACCCTTCCATACTCTTCTTCACATAAAGATAGGTGAAGAATATTAATTGCTTTGGCATTTAGAGATATTTTTTCTAACTCAGATTTTCTCAGCTCACTCAAGTCAATGGCATAGATATCTTCAATAGAAACTTCCTCAGCTTTACCAGTAGCTTGAGATTTAGTAGTATCTCCGTCAACAGCAACACCAGGTTTAGTGATCTTGATTCTCATAGGAATGAGTGGTCCATCAACAATGATCCTCCATAAAGTGAAATCTATAGCCTGCACATGACATTTCATTCGACTACTCCAATAGTCATAGTTAGTCTCATCAAACAGGGGTGGCCTATTGAAGGACATCCCCTCTTTCATAAATGAACCCATGATCAAAAATAAATAAATAAATAAAATAAAATTGCGAGATGTTAAGCTCCATATGCAATTTCTAGCTCTGATACCAATTGTTGGACTATATGATAACCTTAGAGGGGGGTGAATAAGGTTATACGCTAAAATTGAATTCTTTTTTGTTTTCAAAAATTAACGATGCACACTTAAGTCAAAATGCGGAAAATAGGACTTAACTATATGCAGTACCTAAGCAAGCTATACCTATGACAGAACCAGTTATAGTGATATTTTACGCTAACCACACTATTATCAAATTTAACGATAAACAGATTGTGATATTGAACGCAGCACAATGAAATCAAATATAACGATAAACAAATATAAACAAAAACAAAGTAAAGAGAAGGGAAAGAGATACACCGTGATTTTTACGAGGTTCGGGATAAAAGCCCTACGTCATCGGCCTCCGGCTTTGCAACCTTTGGACTTGCGAATAACCACTATATGAGAAGAATTTCTTCAACGTTTTACAAGCAAGCAACTTCCCTATAGCTACCACACCACTCTCAATTTTCCCAAATTGAGAACCCAAGCTCCCCGCTAAGGATTTCACTACCAATCCAATCTCCCCAATTGAACGACCCAAGATCACTTCGCAGGATTTCACAACAACCAAGTAGTAGATGAATACAACAGAGAAACTATGATCCAATCACTCAAGCAATATAACAGTATAGTAGTTGAGAGAGATGTGTGATTTGGATTTTACGATGAAGAACTTGAAGAAAAAATATGACGGTGAGAGTTCTTTTCTTCTTTTTGATTTTTGAGATGTGCGTGTGTTCTCTCTTCCTTCGTGAAAAAAAAACCTAAGTGCCTATTTATAGGGTTTGTAGAAATATGACCGTTGAGGCAATTTTTCACGTAAAATAGATGAGTAGTGAATCGATTCCTTGCTTGAAACAAATGGAATGTAAATCGATTATTTACTCAAAAATATGACCGTTGAAAGCTTCTAAAAAGAGATGAATCGATTATGTGCTTAAATAGGAGTGTATAGAAATCGATTCATTGCTTGAGAAATAGGAAGGTTGAAATCGATTTATGGCTTTAAAAGATAAGGAAGAAATCGATTTTGCTCTTCACAATAGCAAGTGAAGAATCAATTTCTTGCCTGTGGGAAACAGGTGAGGAATCGATTCCTGGCTTTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCAATTTTTCCATTTAAAAACACAAGCCCGTCAATCAATTGTTTTCTTTCCAAAACATATTCATTTTAAAAACCCATAGGCTAGAAATCAATTTCTAGCTTTGTGAAGGAAGCCACAAATTGATTTCTAACTTGAATAATTAGGCTAGAAATCGATTTTCAACTTATAAACACAAAGTCATCAATCGATTCTTAGCTTTACCATTTTCTCATGCTACGTGCCTACCTATTAGGATTTTATATAAAAGATTTTTCTAAGCTTTTAACACAACAGTTATATTTTGAAAAATCATCTCTCAACTACTAAAAGTTATAGAACTGAAGTGATAGGATCTTACATGGTGTCCTATCAAAAGAAGATTAACAAATAGTTATTGAACTCTAGAGTAGCTTCTCCTCCAAACCGCTACACTTTAATATCCTTCATGTCCTGTAGTTTTGTTCAACCGTAAGTGTGGAAAGCAAAAAGGGGGTGAGGATAGAATTAGCCTTAGTTTTTTTACCATAGGACGGGCTAGCATTAATCTGGCCCAGCCTTTCTGATGAGAGAGATGGAGGCGGAGAAAGGGTTTTGGCTACCTCCCTCCCGGTAGTGAAGAAGTGAAGAGGGTCGAATCGAAGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00400.35	WD40	9	46	2.10E-39
PF00400.35	WD40	93	130	2.10E-39
PF00400.35	WD40	263	298	2.10E-39

Gene family

Gene family	Subfamily
Ubiquitin Family	DWD

Gene Ontology

GO term	Description	Category
GO:0071013	catalytic step 2 spliceosome	Cellular Component
GO:0000398	mRNA splicing, via spliceosome	Biological Process
GO:0016301	kinase activity	Molecular Function
GO:0005737	cytoplasm	Cellular Component

InterPro

InterPro term	Description
IPR036322	WD40-repeat-containing domain superfamily
IPR015943	WD40/YVTN repeat-like-containing domain superfamily
IPR001680	WD40 repeat
IPR020472	G-protein beta WD-40 repeat

trEMBL

trEMBL term	Description
A0A1S2YFB9	_

SwissProt

SwissProt term	Description
WDR83_HUMAN	WD repeat domain-containing protein 83

KEGG

KO	Description	Enzyme
K13124	mitogen-activated protein kinase organizer 1

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G64730	Transducin/WD40 repeat-like superfamily protein
Medicago sativa L.	MsG0480023420.01.T01	_
Oryza sativa L.	LOC_Os02g33860.1	WD domain, G-beta repeat domain containing protein, expressed
Cucumis sativus L.	Csa010071	_
Glycyrrhiza uralensis Fisch.	Glyur000048s00002281.1	_
Codonopsis lanceolata	Cl_chr04_32810T	_
Arachis hypogaea L.	AH13G37220.1	WD repeat domain-containing protein 83 like

Expression pattern