Gene detail

Detail information of Am05G036650.1 Annotation

Gene ID	Annotation
Am05G036650.1	chromatin remodeling 24

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G036650.1	mRNA	Chr05	170404860	170414464	-

Sequences

CDS:

>Am05G036650.1
ATGGCGAACAAAAGCGGAAAGAAAGCTGTGAGTCTCAACGACAGCCACTATCGCTTCCTTCAAGACCTTTCCGCCCCTCCCAAACTCAAACCCTCAGATGAAGACCAAACTCCGATTCAACGCCGAAGGGACCAACCACAAGAAGACGAAACTATTCCTCAGTTTTCTGCAATCACCGACTACGATTCTCAAACTCCCAAACCCAAACCCTCAGATGAAGACCAAACTCCGATTCAACGCCGAATCAACCAACCACAAGAAGAGGATACTATTCCTCAGTTTTCTGCAATCACCGACTTCGATTCTCAAACTCTTAAACTCAAACCCTCAGATGAAGATCAAACTCCGATTCAACGCCGAATCAACCAACCACAAGAAGACGATACTATTCCTCAGTTTTCTGCAATCACCGACTTCGATTCTCCAATCGGGCAAAATTCGCCGGAGAATCGCGAACCCGTCAAGGTAGAAGAACCTCCTCATCCTCATCGTGAACCTGTCAAGGTAGAAGAACCTCCTCATCCTTATCCTCCACCCAAGAAAGTTCTTCAGATATTGGATAATTCGTCTCCTAAAGAGGAAAAGAAGACGAAGGTGAAGGTGCAAGGCCGACGCCGCCTGTGTAAGGTGGCGTTCGCCGACGCCGGCAAAAACGTTGGGGTTGATGAGTCTATGTTTGATGAACTCGTTGACCTTGATACCCCTACTCCAGCACCGAAGAATGTGAAAGGGATTAAGGAGAGTGGGGGTAGGAGTGAAATTAGGGATATTTTGAATGATTTGAGTTCAAAGTTTGAGTTGTTATCGGTAGAGAGGAAGCCAGTGCCAAAGCCAGTTGAGTGCTTGGTAGGAGGGAAAGAAACTAGAGGAGATGAGGGCTCAGAGTTTGGCAGTGCTGGGTCTTCGTTTTCTCCTCAACAGGTTCCTCATGATAGCTTGCCGAAGGATACTAAGAATGATGATGGTGGTGATGGGTATGACTCGGAGAATTCTGTTCAGGAGTTGGATCATTATGAGCCTGAGAATGATGGTTCTATAACTTTGACTGGCCCCAAATCAACATACAAGTTGCCGGGTAAAATAGGGAAAATGTTATATCCTCATCAGCGGGAAGGATTGAAGTGGCTCTGGTCGTTGCATTGTCTGGGTAAAGGTGGAATTTTGGGAGATGACATGGGTCTGGGAAAAACAATGCAGATGTGTGGTTTTTTAGCTGGGTTGTTTCATTCCCGTTTGATTAGAAGGGCATTGATTGTGGCTCCCAAAACGCTATTGCCTCATTGGATCAAAGAATTATCCGCGGTTGGTCTATCTGAAAAGACTAGAGAATACTTTGGAACTTCCATGAAAGCAAGAGAGTATGAACTTCAGTACATTCTTCAGGACAAAGGTGTTCTTCTCACCACATATGACATTGTCCGGAATAATACAAAGTCCTTACAGGGGCGTAGTTATTTCGACGATGACGAAAGTGAAGATGCCCCTACTTGGGACTACATGATACTTGATGAGGGGCACCTTATAAAGAATCCTAGCACCCAGAGAGCTAAAAGTTTGCTCGAGGTACCGAGTGCTTATCGCATTATCATTAGCGGTACACCGTTGCAAAATAATCTCAAGGAGTTGTGGGCTTTGTTTAATTTCTGCTGCCCTGAGTTGCTTGGTGACCATAAATGGTTCAAAGAAAAATTTGAATCACCTATACTTCGTGGAACTGATAAAAAAGCTTCTGACAGAGAGAGGCGTATTGGCTCAGCTGTAGCAAAGGAGCTAAGAGATCGTATTCAGCCTTATTTTTTGAGGCGTTTGAAGAGTGAGGTTTTCAATCAAGATGAGGAGAAATCAACTGCAAAACTTTCTCAAAAACGAGAAATCATAGTGTGGCTTCGATTGACCAGTATTCAGCGGTATTATTATGAGGCATTTTTGAAGAGTGAGATTGTTCTCTCAGCATTTGATGGTTCACCACTGGCTGCCCTTACGATTTTGAAGAAAATATGTGATCATCCACTTTTACTGACTAAGCGGGCAGCTGAGGATGTTTTGGAAGGGATGGACTCAATGCTAAAGCCAGAGGAGGTTAATGTTGCCGAAAAATTGGCAAAGCACATAGCAGATGTTACAGAAACAGTCAAGTTTGAAGACAAGCATGATGTATCATGCAAAATTTCCTTTATCATGTCATTATTGGATAATTTGATCCCTGAAGGGCATAATGTACTTATCTTTTCTCAGACTCGCAAGATGCTTAATCTTATTCAGGAATGCCTCACATCCAAAGGTTATGACTTTTTACGAATTGATGGCACAACCAAAGCTAGTGATAGATTAAAGATTGTTGATGATTTCCAAGAAGGTGCTGTAGCTCCAATTTTTCTCTTGACATCTCAGGTTGGTGGTTTAGGACTGACACTTACAAGAGCAGATCGTGTAATTGTAGTTGATCCTGCTTGGAACCCAAGTACTGATAATCAGAGTGTTGACCGTGCATATCGCATTGGTCAAATGAAAGATGTTCTTGTGTATAGATTGATGACATGCGGGACTGTTGAAGAAAAGATCTACAGGAAGCAGGTATATAAAGGAGGATTATTTAAAACAGCTACTGAACAAAAAGAGCAAACTAGGTATTTTAGCCAGCAGGATCTGCGGGAGCTTTTCAGCTTACCAAAAGAAGGATTTGATGTATCTGTTACTCAACGACAATTGGATGAGGAGCATGATTGTCAACATACAATGGATGACTCTTTCAAAGCCCACATAGATTTCCTGAAAAGTCAAGGAATAGCTGGAGTTAGTCACCACAGTTTACTGTTTTCCAAGACAGAACCAGTTCAAGCTGCTCCTGAGGATGAGGAAGTAATAAGGAATCATATGACTAACTACATTGGAACTTCGTCATCTTCTTCACATGATCATATTGCTGAGGGAGCCGAGTCTGCTTATAATCCTAAGGATGTTAATTTAAACAAAAAAGGCTCTTCTCCAAGCAGTGATGGTAAATTGACAGAGTCAGAAATCAAGGATAAAATTAGTAGGCTCTCTCAAACGCTCTCAAACAGGGTGATGATTTCTAGATTACCTGACAAGGGCGAGAAACTACAGAAACGAATGGAAGAGCTGAATTTAGAGCTCGCTAAACTGAGGATGGAACAAAGAAACATAATTGATTTGGATGATATTACCAGTGACTTTCAAAGAGTATTGAATGTATAG

Protein:

>Am05G036650.1
MANKSGKKAVSLNDSHYRFLQDLSAPPKLKPSDEDQTPIQRRRDQPQEDETIPQFSAITDYDSQTPKPKPSDEDQTPIQRRINQPQEEDTIPQFSAITDFDSQTLKLKPSDEDQTPIQRRINQPQEDDTIPQFSAITDFDSPIGQNSPENREPVKVEEPPHPHREPVKVEEPPHPYPPPKKVLQILDNSSPKEEKKTKVKVQGRRRLCKVAFADAGKNVGVDESMFDELVDLDTPTPAPKNVKGIKESGGRSEIRDILNDLSSKFELLSVERKPVPKPVECLVGGKETRGDEGSEFGSAGSSFSPQQVPHDSLPKDTKNDDGGDGYDSENSVQELDHYEPENDGSITLTGPKSTYKLPGKIGKMLYPHQREGLKWLWSLHCLGKGGILGDDMGLGKTMQMCGFLAGLFHSRLIRRALIVAPKTLLPHWIKELSAVGLSEKTREYFGTSMKAREYELQYILQDKGVLLTTYDIVRNNTKSLQGRSYFDDDESEDAPTWDYMILDEGHLIKNPSTQRAKSLLEVPSAYRIIISGTPLQNNLKELWALFNFCCPELLGDHKWFKEKFESPILRGTDKKASDRERRIGSAVAKELRDRIQPYFLRRLKSEVFNQDEEKSTAKLSQKREIIVWLRLTSIQRYYYEAFLKSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDSMLKPEEVNVAEKLAKHIADVTETVKFEDKHDVSCKISFIMSLLDNLIPEGHNVLIFSQTRKMLNLIQECLTSKGYDFLRIDGTTKASDRLKIVDDFQEGAVAPIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSTDNQSVDRAYRIGQMKDVLVYRLMTCGTVEEKIYRKQVYKGGLFKTATEQKEQTRYFSQQDLRELFSLPKEGFDVSVTQRQLDEEHDCQHTMDDSFKAHIDFLKSQGIAGVSHHSLLFSKTEPVQAAPEDEEVIRNHMTNYIGTSSSSSHDHIAEGAESAYNPKDVNLNKKGSSPSSDGKLTESEIKDKISRLSQTLSNRVMISRLPDKGEKLQKRMEELNLELAKLRMEQRNIIDLDDITSDFQRVLNV*

Promoter(3k):

>AM05G036650.1
AATTTTTTAATTTAAAATATTTTAATTTCTCTCTCTTTTTGTCATTAATGTTGGGTTATCTCTCTCTTCGCATAATTAATATAATTTTCCTCTCTTTAAAAAGAATCAATATTAACATTTGTTTTTATATTATATTTATTGATTATTAATTTAATTTTTGGACTAATGATTAGTTATTTTTTATATCGATAGGTGCATTAAAAAAATGTCATTTCAGTTTATAGGCTCCATCAGAGTCTGACTCCTCTCCATTAGGAGAGGAAATGGCAATCTGCATTACTTTTGACATGCACATGACACGTGGTGGTAAACAAATTAAACAGCTCAGATTAAAAATTTAAAATTAAAGTTAAAATACATCATTTCAATTTCATTAGCGCAGGGTTGTCAAAGGTCTCATCTTCTCCGACCTCTACCCAAGACCATCTACTGCCCCACCGTGCCTCAAACACCCTGTCGTCTGTCCTTGCACCTCCATGTCTGTCGTTCTCACACCATGAAGTTGTACGACCAACATCATTAGAAGTTTGTTTCCAATGTTTGCAATTAATGAATTAGTTAGATTCTCAAAAAGAAATTCAAAGAACTTCACAAACCAAGCTTTACCCTTTTCTCTATTATTCATTAAATTAGAATATTCTAAAATTGAATTAAATGTTTTAGGAGATGAGTGTCCATTGAAGAAGTATCTAGAAGATGCTTCAAAATATGGAAAATCACACCTCTAATATAACAAAAATCATGGGGAAGATTGAAAGCTTTTTAGCTATATCACATAACAACAAAATTTGGAAAATATTTCAAAATTCAGAAATACCCACATCTAATTTTAGTGCGAATCAAAGGGGGATAGAAACAATGAAGATGGCGTCACGGAAGAGACTTGACGACAAAGCAGTGCAGCGACGGCGACCTTACGGACCAGCGACCTAACTCAAGCAGGCATGGCGACTGCGGGTGGCCTTACCTAGAATTCAAGAGAGATGAGTTCAAGAACATGATACCGAGAGATTTTTTCCACGTTTGTTTTCAGAAAAAAATTGAATAACTTTGATAGTTCTGAGCCGTGGGATTTGTTTACCACCACATGTCATGTGCATGTCAAAAGTAATGGAGATTTACATTTCCTCTCCTAACGGAGGGGATCCGGACTCGCTCCATCAAGAGTACTTTTTGGTCTAAATAAAAATGTTAAAAAATATAATAAAATTGAACTTTGTTTGTCTAAACTGTTGTTAACTTTTTTTTCCACACAGTTAAAATACACGCTATCTTTTCTTACTTTTACCATTATAGATTTATTCAATAAAAATTGTCTTCCAATCTAAACAAAACCAAATGTCTTTCTTATTTCTAAGTGTATCAACCAAGGACAAAAATAAAACAAAAAAATGTTTTTACTCGGTTAGAGTTTATCTCGGAAATTTAAAATTTCAGAAAATGGGAAAAGAAAACGTGAATTTTATTATTCGAGGACACTAATAGTGTGACATTTTTTTAAAGAATTTTTTTAACGAAGCTTGAAAATTCTGGAATGTAACATATTTTTTAAAATTTTAATTTGTAATATGTGATATTAGCATAATTGGCTATAAAAAAGAAATAGAAGTCTTTTATTTATTTCTAAAATTAATGCAGAGAGAGAAAGCATTAAATTATATTAGAATTTTCAAATATAAAAAAGTACGTAGAATATTAAATTACATGTATGTCTGTCACATTAAGTTGTTTCTAAGTGAAAAAAGAGTTATGTTTTGCCACGCGCTTTCTTTAATGATGACCATATGTGTGATTGTACCAAATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAGGCATTACGGAACATGTCTAAGAGACTAACATCTAAGAATTTGGGCCTTAAGATACATTCTAAAATGTATTTTTAATAATTCATAAAACCTAATTTTATTAATTTTGAAAAGTAAAAGAAATAAGATAGATCAAATATACATGAAAGAGATTTAATAAGTGATTCATTATAATTTTGTAAAAAAATAAGTGATTAATTGCAATACTCATAAACGTCTCTCACATAAAAATTAAATTAGTCATTTAACTTATATTCATTATGAAAATAATTTATATAATATAACTTTTTAATTAGTTGTTTTTTTAGAAAAAGTACTTAAATAACTCTTAATCAAAAAGTCTTTGAGTGTTGATAATTAAATAATTAAATCAAATTAGAAAAACATATTATTTAGTCTTTATTATGCATAATATGTGAAAAACATTAATTACAAAAAAAGATATTAAAGACTAAATTGCTGTAGAAGTGATACATGAAATAGCAATTAATGAGATTCATTCTCAAATGTTATATATATAGAATATAGATATAGATAGATATAGATTAATAGATAGATAGTTTTTTTTGGTCAAAAAATAGATAGATAGATTTTGACTCGAGAAAAATGTGTTTATTTTGAGAAAATAATTTTTTTAGATTCTTAATATAACAATATTATTTTGCTTACACAATCGTTTTATCCTTTTAATTTTTTTCCAAAAACTAAAAAAATAACTTGTTATCATTTTCAAATTGTTTCAAGTATTAATTAACATTAAATAAAAGTAATATAAAATGACAACTTAATAATCGGAAAAACAAAACTATTTTCTTAAACTAAACATGAAAACTTTCCATTATATTATATTTTCATTTTTGGAAATATTTCATTATTTTTTTATTTGATTGTCAGAATTAAATTCGGATTAAATATTTTCAGCGGAATGACCTTTATTTTTTGAAAAACAAAATGAAACAACCCTAGTAGTAGTGAAATTAAACCAAAGCATAAATGGCTTTTCAGCTTCTGTGACCTGAAAGCAAAATTCAAATTGAGCAAAGAAAGCGGGAAGCTAAGGACTGAGGAGTTCCATCATCACTCATCAGTGGTACAATAAGAGCATAAGCATTGTCCTCCATTTCTGTTTCTCACGCACAACTCATCAATGCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00176.26	SNF2-rel_dom	368	672	1.90E-54
PF00271.34	Helicase_C	722	834	8.10E-19
PF04851.18	ResIII	383	534	2.40E-07
PF13872.9	AAA_34	384	516	3.50E-06

Gene family

Gene family	Subfamily
Transcription Factors Family	Others
Epigenetic Regulators	CHR24
Transcription Factors Family	SNF2

Gene Ontology

GO term	Description	Category
GO:0004386	helicase activity	Molecular Function
GO:0015616	DNA translocase activity	Molecular Function
GO:0005524	ATP binding	Molecular Function
GO:0016787	hydrolase activity	Molecular Function
GO:0004674	protein serine/threonine kinase activity	Molecular Function

InterPro

InterPro term	Description
IPR038718	SNF2-like, N-terminal domain superfamily
IPR000330	SNF2, N-terminal
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR001650	Helicase, C-terminal
IPR014001	Helicase superfamily 1/2, ATP-binding domain

trEMBL

trEMBL term	Description
A0AAN9SK85	_

SwissProt

SwissProt term	Description
CHR24_ARATH	Protein CHROMATIN REMODELING 24

KEGG

KO	Description	Enzyme
K20093	DNA excision repair protein ERCC-6-like	[EC: 5.6.2.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G63950	chromatin remodeling 24
Medicago sativa L.	MsG0480023484.01.T01	_
Oryza sativa L.	ChrUn.fgenesh.mRNA.85	expressed protein
Cucumis sativus L.	Csa012016	_
Glycyrrhiza uralensis Fisch.	Glyur001287s00026986.1	_
Codonopsis lanceolata	Cl_chr03_56390T	_
Arachis hypogaea L.	AH13G36430.1	Protein CHROMATIN REMODELING 24 like

Expression pattern