| Gene ID | Annotation |
|---|---|
| Am05G036160.1 | RING/U-box superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G036160.1 | mRNA | Chr05 | 168841041 | 168848058 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF17979.4 | zf-CRD | 253 | 416 | 1.70E-48 |
| PF00097.28 | zf-C3HC4 | 135 | 179 | 3.30E-08 |
| PF13639.9 | zf-RING_2 | 134 | 180 | 6.60E-08 |
| PF13923.9 | zf-C3HC4_2 | 134 | 179 | 1.10E-07 |
| PF13445.9 | zf-RING_UBOX | 135 | 177 | 2.70E-06 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | RING |
| GO term | Description | Category |
|---|---|---|
| GO:0005634 | nucleus | Cellular Component |
| GO:0016567 | protein ubiquitination | Biological Process |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0016874 | ligase activity | Molecular Function |
| GO:0140657 | ATP-dependent activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR018957 | Zinc finger, C3HC4 RING-type |
| IPR040909 | E3 ubiquitin-protein ligase CHFR, cysteine rich domain with multizinc binding |
| trEMBL term | Description |
|---|---|
| A0A1S2YG56 | _ |
| SwissProt term | Description |
|---|---|
| CHFR_PONAB | E3 ubiquitin-protein ligase CHFR |
| KO | Description | Enzyme |
|---|---|---|
| K10644 | E3 ubiquitin-protein ligase CHFR | [EC: 2.3.2.27] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G47570 | RING/U-box superfamily protein |
| Medicago sativa L. | MsG0480023535.01.T02 | _ |
| Oryza sativa L. | LOC_Os11g07450.2 | zinc finger, C3HC4 type domain containing protein, expressed |
| Cucumis sativus L. | Csa016008 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000252s00012664.1 | _ |
| Codonopsis lanceolata | Cl_chr03_56090T | _ |
| Arachis hypogaea L. | AH03G31750.1 | E3 ubiquitin-protein ligase CHFR like |