| Gene ID | Annotation |
|---|---|
| Am05G035020.1 | Pectin lyase-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G035020.1 | mRNA | Chr05 | 165627556 | 165629656 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00295.20 | Glyco_hydro_28 | 139 | 425 | 1.40E-37 |
| PF12708.10 | Pectate_lyase_3 | 50 | 105 | 6.00E-09 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH28 |
| GO term | Description | Category |
|---|---|---|
| GO:0004650 | polygalacturonase activity | Molecular Function |
| GO:0005975 | carbohydrate metabolic process | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| GO:0047911 | galacturan 1,4-alpha-galacturonidase activity | Molecular Function |
| GO:0016829 | lyase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011050 | Pectin lyase fold/virulence factor |
| IPR012334 | Pectin lyase fold |
| IPR024535 | Pectate lyase superfamily protein |
| IPR000743 | Glycoside hydrolase, family 28 |
| trEMBL term | Description |
|---|---|
| A0A371FX73 | _ |
| SwissProt term | Description |
|---|---|
| PGLR_VITVI | Probable polygalacturonase |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G61490 | Pectin lyase-like superfamily protein |
| Medicago sativa L. | MsG0780039739.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g03350.1 | polygalacturonase, putative, expressed |
| Cucumis sativus L. | Csa000331 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000100s00008379.1 | _ |
| Codonopsis lanceolata | Cl_chr03_51700T | _ |
| Arachis hypogaea L. | AH13G33400.1 | Probable polygalacturonase like |