Gene detail

Detail information of Am05G034470.1 Annotation

Gene ID	Annotation
Am05G034470.1	glycosyl hydrolase 9C2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G034470.1	mRNA	Chr05	164426041	164431704	-

Sequences

CDS:

>Am05G034470.1
ATGGAAAAGTTCACCAAACTCATTTGCATGCTTCCCTTGCTTTTTCTTCTGTGGCCATCTTTTGCTTTGGCTGGCCATGACTATAACCAAGCCCTGAGTAAGAGCATTTTGTTTTTTGAAGCTCAAAGATCTGGTAATCTTCCTCCTAACCAGAGAGTTTCATGGAGATCCCATTCTGGTCTTCAAGATGGTAAAGCAAGCGGGGTGGATCTAGTTGGTGGTTACTATGATGCAGGGGACAATGTAAAGTTTGGGTTACCCATGGCATTTACCGTGACGATGATGTCTTGGAGCATCATAGAATACGGTAAAAGTTTGGCTGCTAACGGTGAGCTTGGTCATGCCATGAACGCCGTTAAGTGGGGTACTGATTACTTCATTAAAGCCCACCCTCAACCCAACGTTCTCTACGGAGAGGTAGGAGATGGAAAGACTGACCATAACTGTTGGCAAAGACCGGAGGACATGACAACTGACCGTCGCGCTTACAGGATTGATCAAAACAATCCCGGGTCGGATCTTGCCGGAGAAACGGCCGCCGCTATGGCCGCAGCCTCTATTGTCTTCCGCCGCTCTAACCCTACCTATTCTAAGGAACTCCTCCGCCATGCCTACGAGTTATTTGATTTTGCGGATAAATACAGAGGCAAATATGACAGCAGCATTACAGTTGCACAGAAGTTTTACAGATCTATCAGTGGCTACAATGATGAATTGCTCTGGGCTGCAGCTTGGTTGTATCAAGCATCTAACAATCAGTATTACTTGGATTACCTTGGTAGAAATGGCGACTCCATGGGTGGAACTGGTTGGTCCATGACTGAATTTGGTTGGGATGTCAAATATGCTGGTGTTCAGACATTAGTTGCCAAGTTCTTAATGCAAGGCAAAGCTGGGATTCATGCACCAGTATTTGAGAAATATCACCAAAAGGCTGAGAATTTCATGTGTTCATGCCTTGGAAAGAGTACTCGCAATGTCCAGAAGACACCTGGTGGCCTCATTTTCCGACAAAGATGGAACAACCTGCAGTTTGTCACAAGTGCTTCCTTTTTAGCCACTGTCTATTCTGACTACCTTACTTCTTCTGGTAGAAACTTGCAATGCAATTCAGGCATTGTCCCTCCAGCTCAGCTTCTCTCCCTTGCAAAGTCTCAGATTGATTACATTCTTGGGGACAATCCAAGAGCTACAAGTTACATGGTGGGATATGGAAACAATTTCCCTCAAAGAGTTCACCATAGAGGTGCATCCATTGTTTCCATCAAAGTTAACCCTTCATTTGTTAGTTGCCGTGGAGGATATGCTACTTGGTTTAGTAGCAAAAAAGGCAACACTAATCTACTTACTGGTGCTATTGTTGGTGGACCTGATGCATATGATGACTTTGCTGATGAAAGAGATAACTATGAACAAACTGAACCAGCAACCTACAACAATGCTCCTCTCATCGGTATTCTAGCACGTCTCAGTGGAGGTCACGGCGGCTATAGCCAGCTCCTTCCAGTTGTTGATGCATCTCCTAAGCCTGTTGTCACCAAGCCTCAACATTCCTTCAAACCCAAGACAACTCCTTCCCCAGCTTCATGGTCAGGTCCAATTTCTGTTGAACAGAAAATGACAGCTTCTTGGGTTACAAATGGAAGAACTTATTATAGATACTCAACAGTGGTAACTAACAAATCTACCAAGAGTCTTAAGTCTCTCAATCTTTCAATATCCAAACTTTATGGACCAATCTGGGGAGTAACAAAGTCTGGTGATTCATACACATTCCCATCATGGCTCAGCTCATTATCAGCTGGTAAAAGTCTTGAATTTGTCTACATCCATTCTGCCTCTCCAGCAGATGTCTCCGTGGCGAACTACTTATTGGCTTGA

Protein:

Promoter(3k):

>AM05G034470.1
TGGGTCTACGATTTCTTTTTTTTTTAAAATCTGCCGGTAAGGTCATTTCCAGCGGATAGTTAAAAGAACCGCCAATTTTGAATTTCGAAAATCCGCCGGAAATGCGTAAAAATCCGCCGGAAATGACAACCCAACTAAAATCTGCCGGAAACGTCATTTCCGGCGGATTGTTTTGAAAAAAGCGGGGGATTTGATTTTTGAAAATCCCCCGGAAATCCTTGAAAATCCACCGGAAATCACCTGACCCCCTAAAATCCGCCGGATTTGATTTCCCACACCCCTCCCTCTCAAACCCCTCACACCCCCTCACACCCACCAAAAACACACCCAGCCAAAACCCTCTCCCTCTCCCTCACTCTCTTTGACTTCTCCCTCTCCCAAACCCACTCAATCTTCGATTTTAGCCTTCAAACTCATTTTCGAAACATAAGGTACACGATTTCTAACCCTCATTTACTTGCATTTTGCTTGATTTGCTGTGTTTTATCATTTTTTCACTTTTGCATTTTCGCGAAGCATTCGGTTGACGACAACCGAATGCTCTTGGGGACGAAGCAAAATGGACCCATTCGATTGAGCTCAACCGAATACGCCCGGTTGAGTTCAATCGAATCATACTGATACTGATTGTGTTTGATATGTTCGGTTGCAGGTATGATCCAATTCGTTACCCTCATTGAACGAAATGCTGGGAGGATTTCCATTCCAAATGAGATTTGGAGACTAGAGTTGCCTTGTTCCTTTTATTTTGTTTTGGAAGTTGGCCCTTGTATTCGTGGTGTCAACAACATGCGCTATGACAACATCCTTACTAATACGCATGCCATCTGCCAAGCGTATGGGGGGGTGTTGAGAGTGTGGAAGCCTCGTTAACATACTATCAGACTGGGAGCTTCAAGGTCACCAGGATTATGCCGGCGGTTGCCTCTGATTGGAGAGGGAGTGACAGTGATACTGCGAGTGATGCTGGATCCGGCTCTGTTGTTACCCAGTTGTAGTTTTTTACTGTTATTTTGTTTATCAACAATTGTAATTGAACGTCACTGATTTAGTAATGAATAAATATTAGGTTGATTATTTTTTGGTTTAAAGTACCGTTTAAATCATGAATATAATTCGGTAATTCAAACTAATGATTAATAAATTAATAAATGATTAATAAAAAAGTTAACTATAGGAGCAGGAATGAAAGACATCATTAAATCAAAAGAGATAGAGAGAGATGTTCTAGCAACTTTCAGCAGAAGGGGAGAATCTGATTTACTAAATCAATATAGAGTATAGACATATTCAAACACAAACAACATATTTTGCATATCACAATTATTGTAATTTCCTTGATGAAACATTTCATAAGTCACTTTTCCATCTCAATTCTCAATCAACTAAATGATTTGGCACACTTCTAACATGACAATCTCAATAGAAGTCAGTAATTCAAAATGGAGTATATAGACAAAGTCAGCCAAGTTTCAGATTTACATGTGAGAAAAACCAACTGATCTATACGAACGAGAAGTCTAACACTTGAAAAAGTTAATGATTTCAATTTTAACTAGACATCACATAAGAAACCAAAATCACTTCACCTTTACTAGTTGCTTGTTGCACGGAAAGTGTGATTTCAAAACACTAATTTCATTTCAGGAAAGGTTATAATTCAATTCAAAGGAGATGGATAGAATGAAATTATATTCATTCAAAACAGAGTCTGGTGGAAGGAAGGTCAATTCTAAAACACATAACAAAAGAGAAAAACACAATCAAAATAAATGGAAGCTTTTTATCCTATAAAATCATACAAACAGTCCTACATAACTAAATCACAATGTACAAAGACAAATAACAAAAACCCTTTCAGAACAGAGTACTTGAAGAAGGAGAAGCAAACGGCGGTTCGTGTGGAGTATGCGAGAACCCTTTCTGGCGAACCCTAACAGCAGCAGAGAGATAGGTCGAGAACCCTAACAGTGTGCGAGAACCCTTTGATGGAAGAGAGATAGGTATAGAACCCTTTCCAACCGATTAGTGTGCGGGAACCCTAACAGTGTGCGAACCCTTAGTAGCATGGCGGTCGACGGAGGAGACAGTGACGGCGAGAATACCTTTCGTGACCGCGAGAATACGAAATTGACGGCGACAGTGCGTGATTGACGGTGGTGCGATAAGAAGAAAGTATTTTTCAGAGTGGTATACGGTGGCTGAGCGAGATTGAAGGGGAGAGTTCGTGAGGTGAGAGTTGTGCATGAGATGTGCAGTTTCAGAAGATGGAGAGCGTGATCAGAGACTTGTGTGTGAGAGAGCGTGAGAGTGATTAATTTTTGTAAAACCTAATAATTTTGTTTTTTTAATTTCATTTAAATTACTATGGTGGGCCCACCGTATGTATTGCTGTATTTTGGCTAAATTATTTGGCCGAATATCATTATCGATAACAAAAGCCTCTAAAAGGCCCTGAAAAACCGTCCAGTGTCCACTGCTAAAGGCTAAAATTACAATAGTGACAATCACACACCAATCTCCATTCCATAAGTCAAACTATTTCCCCAATATTTTTATTTAACCTGGGCAGTAATTTCAATTGGACCAAATATTTTAAAAGCTCACCGACTCCAACCTGTAAGGCCACATGCTTTTGTTCCTCACTCATTCAAAAACGTTTGTTGCCACTTCAAAAAATCCAAAAAATACAAACAAATTATAATTATCATTTAATTAAAATCACTGTCAATTTCCGGGTTCTTGATACCTTCCCTTTCCCACTCTCGTTAATATATAGAGAGCCTCGAGCTCCTCAGTTTCCAATCCCCGTACTTCACTTCACTCTCTCTTTCTTCTCTGTCACACACTCTCTTTTCTGAAACTTCTGTATTTCCGCAAGGATTCTCTCCTTAATTACCGGGATTATCCGAAGTTTCAGCTGCTCATACTCATCGACATTGCCAATTTTTCTTTTCCCTTCACTACATTGAACACATTACAACGTGCTAGTAGTCTTCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00759.22	Glyco_hydro_9	28	487	3.30E-149
PF09478.13	CBM49	534	611	4.80E-28

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	CBM49

Gene Ontology

GO term	Description	Category
GO:0030245	cellulose catabolic process	Biological Process
GO:0008810	cellulase activity	Molecular Function
GO:0005576	extracellular region	Cellular Component
GO:0030246	carbohydrate binding	Molecular Function

InterPro

InterPro term	Description
IPR012341	Six-hairpin glycosidase-like superfamily
IPR008928	Six-hairpin glycosidase superfamily
IPR033126	Glycosyl hydrolases family 9, Asp/Glu active sites
IPR018221	Glycoside hydrolase family 9, His active site
IPR001701	Glycoside hydrolase family 9
IPR008965	CBM2/CBM3, carbohydrate-binding domain superfamily
IPR019028	Carbohydrate binding domain CBM49

trEMBL

trEMBL term	Description
A0A1S2YFP2	_

SwissProt

SwissProt term	Description
GUN6_ARATH	Endoglucanase 6

KEGG

KO	Description	Enzyme
K01179	endoglucanase	[EC: 3.2.1.4]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G64390	glycosyl hydrolase 9C2
Medicago sativa L.	MsG0480023682.01.T01	_
Oryza sativa L.	LOC_Os01g12070.1	endoglucanase precursor, putative, expressed
Cucumis sativus L.	Csa020346	_
Glycyrrhiza uralensis Fisch.	Glyur000036s00004643.1	_
Codonopsis lanceolata	Cl_chr03_54440T	_
Arachis hypogaea L.	AH03G28640.1	Endoglucanase 6 like

Expression pattern