Gene detail

Detail information of Am05G034360.1 Annotation

Gene ID	Annotation
Am05G034360.1	UDP-D-glucose/UDP-D-galactose 4-epimerase 5

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G034360.1	mRNA	Chr05	164251965	164255984	-

Sequences

CDS:

>Am05G034360.1
ATGCCAACGCAAACCGTTCTGGTTACCGGCGGAGCCGGTTACATCGGTAGCCATACCGTCCTTCAGCTTCTGCTCGGCGGTTACAAGGCCGTTATCGTTGACAACCTCGACAATTCTTCTGAAACCGCCGTTTACAGAGTCAAAGAACTCGCCGGAAAATTTGCTGATAACCTTTCATTTCATAAGATTGATCTCCGGGACAGAGACACACTCGAGAAAATTTTTTCTTCAACAAAGTTTGATGCTGTAATACATTTTGCTGGATTGAAAGCTGTGGGTGAAAGTGTGCAAAAACCGCTACTCTACTATGACAACAACTTGATTGGCACAATTGTTCTACTTGAAGTCATGGCTGCTCATGGATGCACTAAGCTTGTGTTCTCTTCTTCGGCCACTGTCTATGGTTGGCCAAAGGAGGTCCCTTGTACTGAAGAGTTCCCTTTGTCAGCAGCAAATCCATATGGACGAACCAAGCTTATCATTGAAGAAATTTGTCGCGATATTTACCGTTCAGGACCAGAATGGAAAATAATTCTGTTGAGATACTTCAATCCAGTTGGTGCACATCCAAGTGGTTACATTGGTGAAGATCCTCGTGGAATTCCCAACAATCTCATGCCGTTTGTTCAGCAAGTAGCAGTTGGTAGACGCCCTGCATTGACAGTTTATGGAGCAGATTATAAAACAAGTGATGGCACCGGAGTTCGCGATTACATTCATGTAGTTGATTTAGCAGAGGGGCACATTGCTGCGTTGCGCAAACTAGATGATCCTAAAATAGGTTGTGAGGTTTATAACTTGGGAACTGGAAAGGGAACATCTGTTTTGGAGATGGTTAAAGCTTTTGAAGAGGCCTCAGGAAAGAAAATTCAACTTGTAATGGCTGATAGGAGACCTGGAGATGCTGAAGTTGTTTATGCATCAACAGAGAAAGCAGAAAGAGAACTTAAGTGGACAGCTAAATTTGGTGTCGATGAAATGTGTCGCGATCAATGGAATTGGGCTAGCAAAAACCCTTATGGCTATGGTGAATCTGAAGATTGA

Protein:

Promoter(3k):

>AM05G034360.1
AACATTGATTATCAAAAAAAAAAACATTCGTAATTTTACAAGATTCATGTTGTCCGATGTGTAATGATAATTTTGAAGGCAAAATATCTCCCGAGGTCTCTTAACTTATTTTCAGATAACGAATAGGTCCCTTAACTTTTTTTTTGTAACGATTAAGTCCCTTGAGTTTTAAAAATGTTGCACCATTGCCCTTTTTAACGTTTTGTTACTAACACCATTAAATAGTCTTTTATAATTGACTGTTTGACTGCTGAGTTGGCATGAACGTGGATTAAATTATGATTTTTATATTCTATTAAAAAATAAAAAAAAAATCTGGTTGAAAGTCAAAAGCCCTATAAATGCTTCCCTATCAGGTTCATTCCCAAATTCCATTCTCGTTCATCAGCATCATTCCCAAATTCCATCAATGCTTCCCTATCATGTTTATTCAATGCAATTTCCTTATCATGTTCATTCCAGCTGTGTCCTGCCAACTCAACAGTTAAACAGTCAACAAAGAGATTGATTAACGGAGTTAAACAAAAACTGTTAAAAAAGGCAACGGCGCAACATTTTTAAAACTTAAGGGACTTAATCGTTATAAAAAAAGTTAAGTGACCTATTCGTTTTCTGAAAATAAGTTAATGGACCTCGAGAGATATTTTGCCTAATTTTGAAACATTGGCACATTTATTTTTTGAATGTCCTTTTGCACGGAAATGAATTGACGTGTCTTCCAAGAGAAGGGATCTAATTATGACTTTGTTATCAACAATATCAAACATATTTCTTGGAGTTGATTTGCTGGAGGATTGGGAAGGAATTGTAGTATGACGGTATCCTAGTGGTGGAATAACCCATTGGTTTGTGTAAATTAACAGAGTCTAATAGACTCTCTTGTATTGGGTTGGAGCACCCCTATCGGGAAAAAACGAGAATTTATATGATTTCTCTTGCGAGTTAGAATCATCTCAAATACTTGTTGTGTCAAGTAGGAGTGACACATACAAAAAGATTATAACATTTATTATTTTATTGTATGTGTCACTTTCTCTCTTTCTTACACAAACAAGTACTTGAGAGGAAACTAACTCCCCGCATATAGGACTAGAAGATTAACATTAGCCCCTAATACGAAGGATGAAACAATTAACATTGGGAACGTTTCCAACACCGTGAAACCAAACAACAAGAATTAAAACACCATATTCTAGGTGCAAATAACATTACAAACAAAGATTAAAACACCATAACATGTGTGTGGATTCTCTTTATTTCCTCTCCATTTATTCTCTCAATTACTTTTTTTACTATAGTTTTAGGGTGTTTTAGGTGTATAAAAAAATACTTGCACCCCATTTAATGCTATATTATTATTTTTATTTTCTCAAAACTATAGTATTAGAAGTAATGGAAAACATAATTAATGGAGAGAATCTTTACTCCCAAGAGGTGCAAAAACTAGACCCGATGTCAATGTAAGATTACTTGAGGAAGAAGTCTAATAACATTAAGACTATCTAAATGAACCTAAGTAATTAAACTAAAAGAAGTAGCTTCACTCCAAGGAATACCAAAGCTAAGGAGGGAAAAAGAAAAGGAAAAACTATAATGAGAAAAAGGGACCCTATTTTGTGCAAACGAAAATGGGCTCAATGGTGGTGGTGAGCAAAGGACGACAAACAACAAAGTTTAGGTGACAAGATGATCAATTCACATGACATAAATGACATAGGTTCTATTTGAGTTAGAGGTTTCGTACACGTTAAATGAATCTAAGTAATTAAACTAAAGGGAGTAGCTTCAACTCCAAGGAATACGAAACCAAGGAATAAGGAGGGGGAAATGCAAAAAAAAAAAGACTATAATGAGAAAATGGGAACCCTATTTTGCGCAGACGAAAATGGGCTCAACGGTGATGGCGACCAAAGGACTACAAACAACTAAGTTTAGGCGACAAAAGACACAGTTCACGTGGCATAAATGACATAGGTTTTCTTTGTGTGATAGATTGCGTACATGTTAATGTGAAAACTTTAAAGTTTCGTATGTGATCTAAACTTTAGGCACTATTTTCTAAAGAATGCATTGTATTATGCATTAAATCGAGGAACAAAGTTATTAATGTTTTTTTATAACAAGATTTATTTTTTTGCTCAAAAATATAATAACAATTCCGTTTTTTTATTACCATTTAATGTCATTTAACAGACAATATTCTTCCGTGGAAAAAACAAGAAGATTCTTCTTAGTGTCAAGAAAAACCAATCGTTTCCTAAAAAAAAAAAAAGAATCGTACCCTAACTTTAAATGGCACGAATCATTTATTCCATCTTTAAGGATCATGTTTGGAAGAATAATTCAAATCCTACCAAAAAAAAGTACATTTCAAATTAAAGAATAATGTCACCAAAGTAGTAACAATACAACTAACTAATGAAATTAAAACAGCTTATGCCCTTAAATTTTATAATGTTACAACAACAACCACTCAACTAACAAACAAAAACTCCACCTAGAGAGTGTAACTGTCATTAACCTGTTTTTAATTAACCAATCATTGATAAAAAATTGCCCCAAAAGAAAGAACCAATGATTCATTCACACATTAAAAGAGAGACTCATTAGAAAATAGAATTTCCAGGTGACTGCTGTAGAAAGATTAAGGAAATGCAAAGACGAAATCAAGAATAGACTCACTGGAAATCCACGTGAATGATCTGGAGCAATCAACCATAAATAAATAAATAAAATAATCAGAAAAAGAAACACATGAAATTTCGGTAAAGAAAACAAAAGAAAGCAAAGTATAAGTAGAAGTAATATATATGACTTTATGAACGTGTCACAAAATTCTCCGAAAACGTCGTAGCGCGTAACAAACTCTCGCTTTTACACTGACACCTACAAAAGTAAAACACACCTCCACCCTTTTCTCTGTTTCTGTTACAATTTCAAAGCCATCGTTATACTTTTCCTGGCTTTTCTTTCTTTCTTTCTCGTGAAAACGCTTCAATT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF16363.8	GDP_Man_Dehyd	7	330	2.50E-70
PF01370.24	Epimerase	6	268	2.00E-55
PF01073.22	3Beta_HSD	7	163	1.80E-16
PF02719.18	Polysacc_synt_2	6	131	7.90E-14
PF04321.20	RmlD_sub_bind	5	167	1.40E-11
PF00106.28	adh_short	4	95	2.10E-06

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0016020	membrane	Cellular Component
GO:0019320	hexose catabolic process	Biological Process
GO:0003723	RNA binding	Molecular Function
GO:0006364	rRNA processing	Biological Process
GO:0006720	isoprenoid metabolic process	Biological Process

InterPro

InterPro term	Description
IPR005886	UDP-glucose 4-epimerase
IPR036291	NAD(P)-binding domain superfamily
IPR016040	NAD(P)-binding domain

trEMBL

trEMBL term	Description
A0AAN9R9B7	_

SwissProt

SwissProt term	Description
GALE2_CYATE	UDP-glucose 4-epimerase GEPI48

KEGG

KO	Description	Enzyme
K01784	UDP-glucose 4-epimerase	[EC: 5.1.3.2]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G10960	UDP-D-glucose/UDP-D-galactose 4-epimerase 5
Medicago sativa L.	MsG0580024334.01.T01	_
Oryza sativa L.	LOC_Os05g51670.1	NAD dependent epimerase/dehydratase family protein, putative, expressed
Cucumis sativus L.	Csa012774	_
Glycyrrhiza uralensis Fisch.	Glyur000036s00004655.2	_
Codonopsis lanceolata	Cl_chr03_54720T	_
Arachis hypogaea L.	AH15G06720.1	UDP-glucose 4-epimerase GEPI48 like

Expression pattern