| Gene ID | Annotation |
|---|---|
| Am05G033840.1 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G033840.1 | mRNA | Chr05 | 162928622 | 162937086 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13234.9 | rRNA_proc-arch | 525 | 774 | 9.10E-69 |
| PF08148.15 | DSHCT | 801 | 971 | 4.10E-46 |
| PF00270.32 | DEAD | 77 | 223 | 4.30E-18 |
| PF00271.34 | Helicase_C | 368 | 469 | 1.60E-08 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0070013 | intracellular organelle lumen | Cellular Component |
| GO:0016787 | hydrolase activity | Molecular Function |
| GO:0010093 | specification of floral organ identity | Biological Process |
| GO:0060149 | negative regulation of post-transcriptional gene silencing | Biological Process |
| GO:0006397 | mRNA processing | Biological Process |
| InterPro term | Description |
|---|---|
| IPR025696 | rRNA-processing arch domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR016438 | ATP-dependent RNA helicase SKI2-like |
| IPR012961 | ATP-dependent RNA helicase Ski2/MTR4, C-terminal |
| trEMBL term | Description |
|---|---|
| A0AAN9MPY2 | _ |
| SwissProt term | Description |
|---|---|
| HEN2_ARATH | DExH-box ATP-dependent RNA helicase DExH10 |
| KO | Description | Enzyme |
|---|---|---|
| K12598 | ATP-dependent RNA helicase DOB1 | [EC: 5.6.2.6] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G06990 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
| Medicago sativa L. | MsG0480023744.01.T01 | _ |
| Oryza sativa L. | _ | _ |
| Cucumis sativus L. | Csa012239 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000846s00019250.1 | _ |
| Codonopsis lanceolata | Cl_chr03_09450T | _ |
| Arachis hypogaea L. | AH03G26470.1 | Protein HUA ENHANCER 2 like |