Gene detail

Detail information of Am05G033260.1 Annotation

Gene ID	Annotation
Am05G033260.1	6-phosphogluconate dehydrogenase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G033260.1	mRNA	Chr05	161560992	161562210	+

Sequences

CDS:

>Am05G033260.1
ATGCCACTCCCTATCCTTCATCTCCGTTCACTTTACCGTCGTATCCGTATCAGCCACTCTCACACTCGTCTTCTCAGCTTCATGGCCACCGCCGAGCCCATTAACCCATCAAACACCCGCGTGGGTTGGATCGGCACCGGCGTAATGGGCCAGTCCATGTGCGCCCACCTAATCCGAGCCGGTTACTCCCTCACCGTCTTTAACCGCACACTTTCGAAAGCCCAACCACTCCTCGACATCGGAGCTCACCTCGCCAACTCCCCTCACGCCGTTGCCTCCCAATCTGACGTCGTTTTCTCCATCGTCGGTTACCCCTCCGACGTTCGCTCCGTCCTCCTCGATCCCACCTCCGGCGCTCTCGCCGGGCTCCGGCAAGGAGGCATCCTCGTCGACATGACTACATCAGAACCCTCCCTCGCCATCGAAATCGCCGCCGCTGCATCCTCCAAAGGCTCCCACTCCATCGATGCCCCTGTCTCCGGCGGTGACCGCGGCGCAAAGAACGGAACCCTAGCAATCTTCGCCGGTGGAGATGAATCAATTGTCAAGAAATTAGAGCCGTTGTTTTCTCCGTTGGGGAAAGTGAACTACATGGGTAGTAGCGGGAAAGGGCAATTCGCGAAACTTGCAAATCAGATAACAATAGGGTCAACGATGGTGGGGTTAGTAGAAGGGATGGTGTATGCTCACAAGGCGGGTCTTGACGTTGGGTTATACCTTGACGCTATATCGACGGGTGCAGCGGGTTCAAAGTCGCTTGATTTGTATGGGAAGAGGATATTGAAGAAGGATTTTGAAGCTGGATTTTTTGTGAATCATTTTGTGAAGGATTTGGGGATTTGTTTGAAGGAGTGTCAGAATATGGGTATTGCTTTGCCTGGGTTAGCACTTGCTCAACAGCTTTATGTTTCGCTTAAGGCTCATGGTGAAGGTAATTTGGGTACTCAGGCACTTATTTTGGTTCTAGAGCGACTCAACAATGTTTCTATTCCACCAGCTCTTGCTTGA

Protein:

Promoter(3k):

>AM05G033260.1
ATTACACACAACACGGTCAAGTCTCTTCTTATAAGTTGACCCTAGCCCAAGTGAAACAGTCACCTTTGAAGCCAAGGTCCATTAGATCACATCTATCAATGGTGTCTTGAAAGCAATTCTCACATATTTGGTCTCTGACAAGTGGAGGGCCAGTTCTCTCACTTTTTCTAAGAATAGCATTGAAATCACCAATTAATGCCCAAGGGCCATCAATATCAGCATGGAGCTCCTGAATATCATCCCAAAGAGTCTGTCTAGGTGCATAATGAGGACTTCCATACACAATGGTCCTAAACCAAGGATTAGAATTAGTGGAAATAACCTGCACATGAACAAATTGGTTAGTTTCCTTCATAATTCTGATGTTCCAGTTATTGTTATTCCATAGGAGCCAAATACCAATGGCCTGTCCCCTAGCATCTTTGATATAATGGTTATCAAACCCTATCCTCTTAGCAATTCTCTTTGCTATGGCACCACTAGTGTGAGTTTCAAGCAAAGCAACAAATGAAGCAGAATATTCCCTCTTCATGTCTTTAACCAGTCCTGCAAAGCCTTTGGAAGCTGTCCCACGACAATTCCAACGGATAAGATTCATAGAGAAGATTGAGGGTTATGAGGTTCTACTACCTCAGTGTCTTCCATAGGTTCTTGAATACCCATATTCTCCCACACAGGTTCTTCAACAATCTGCATGGAGACATTCTTGCAATGCAAGCTATCATTACCCCTAACATCATTGTCTTTAGCTGCCTGAAGTGCTGCTGCCCTGAGTTTGTCATTCTCATCAAGCTTCCCAAGAGCAGTTCTGATTGAGTTTTCACTCCTAAACCTGTTTAGGAGGTTCTCACCATGGGACTTGTACATACTCTTCATATATTCCAACATCTCCTCTTCTTTTTTCTTTCTTTCCTCACTTCCACTGTGATTACTAGAAGAAGGATGTTTTCCTCGTCCACATCAATAACTATATAAGGGAAAGGTTTAACAACCTTCTTACCCTTGATATTGCCAAGTTTGACCACTCCAATATCTTTCTTTGCAATCCCCTTGCCAGGTTTTGTGACACCTCTACCTTTGGTGTGAATTTGAGGGTTCTTTCCTCTAGTAGAATTTCTGACCTTGGGCTTAGACCACCTTCTAGTGTTCTCAACAATCTCTGGAGCTATAGTCAGCTCTTTCTCAGTAGGATTCTGTTTCTCCACCCATATAGGTGTCTCCTTGGGCATATCGGTTTGAGAACCCTGTCTTCTAGTGGATCCTTGCGAATTAGCTTCCTTTTGTTTGGTGACAGTAGGTTTCACAGAGTTCCCTTTACCTGCATTTTTAGTTTTCTTTTTAAGGTTGTATTTAGGGATATTCCATGGCCCCATAGTGAGTTCTGCATCATTATTAGCCCCAACTCCAGTGAAATTTTCATAGACCCTTTGATCAGGTTGTTTGTCAGGCACAGTTGCCATAGGAGGTGAGTTGCAATTGGCCATATTTTGTTCACTCTGATCAGAATGTTGATTAGCAGCAGTAGACTCTTGTTTTTACTGAGTCTTAAACTCAGTTCCACTCACTTGAATGCATTGATCCTTTTTGTGGCCATATTTACCACAATTAAAACAAATAGAATGTACTCCCTCATATTCCAATAGAAGCTTAATCCCACAAGTATAGAAGTGTGAAGCCAAAGGTTTCTCTAGGTCAAGTTCAACACAAATTCTAGCAAACTTGCCTCTAGAATGTAATGAAGTTAATTGATCAATTTTCAGCATAGTACCTAGGGTAGCACCAAGTCTCTGCAGGAATGTTTCATTGCATAGTTCAAGAGGGAGTTTAGGAATTCTCACCCACACAGCAACCTTCTGCGTTATAGAGGCATTATGAGAGAAGAAAGGTCTCCATCTCTGCACTATTAGATAGTGGTCAGCAACTTTCCAAGGTCCATCAAACAAGGCATGTTTGTAGTCATCAATGGAGGAGAGATGAACCATGAAGAAATCTTCAGGAAGATCAATGACCTTCATCTTTCCATGTCTTACCCAATCCCTTCTCAACTTGTTTTCAAGGATCCCATAGTTGATTCTTTCCCCAGAACTTTAACAATCAGGGTGTTCTGTCAGGGTTTACCCCAACCTGCGAGCTCATCCTTTGACACATTAACAACTGGAATGCCCTGTTTCTGGTGTTGTGAAGAGTGGGCTTTCATCTCCTCAGCTAGGTTAACAGATTCGTTGTTGTTTTTCTTGTCAATACCAGCTTTTTCAATAAGCTCAGCCCAACACTCCTTTTCTAGGTTTAGATTAGGGCTTTGTTTGAGCAAAGCATCCTTGAAAGAACTAGAACCAATGTTGCTAGCCGTGTGCGCCTTAGGAATGTCTCGCGGATTCACCATTGGTGGCGTCTCTGAGGGCGCCTCAATTTGCGCCTCTGTCATGCTTTCTTCAGCTGTTATTACGTTTGAGATTTGCTCATGTGTCTTACACTTTTTGGTGCTTCTTTGCAGGGAATCTATTTCTTCCTCGGTGGTTGCCGTCACGTTAACGGGGGTGGGGGGTACTCATGCCCTAGCAGAGCGCTGAACCAGAGAGAGTTTGGAAATAAGTGTTTTGCAAGATGTGTATAGCTGCTTTTTCCTTTCCTTTCCTTTCCCTCCAGCCTTCTTACCAAACATACGCTAAATGTAAATTCCGTTTCCATCCCATCCCATCATAGCTCGAACATACATCGCCCAAGAAGACAAGATAATCGGACGCGAAAATTAACCATAAATATATTACTCCCTCTGTCTCATATTATATGTCGTTTTGGGTCATTTCACACATATTAAGAAAAGTAGTTAATTTTGTATGAGAAAGAGAAATTGTGAGTTAGTTTACCAAATTAACATTCATTAATGACATTGAAAAAATAAATTAGTAGAATTATGAAAGAGATATTAAATAATAAAATGTATGATAGGAAAAAAAGAAATAATGTTTGATGGAGCATGTGGCAAATAAAAGAAGAGGA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03446.18	NAD_binding_2	40	196	2.20E-44
PF14833.9	NAD_binding_11	202	321	2.90E-32
PF01488.23	Shikimate_DH	37	102	1.70E-06

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0050661	NADP binding	Molecular Function
GO:0051287	NAD binding	Molecular Function
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Molecular Function

InterPro

InterPro term	Description
IPR036291	NAD(P)-binding domain superfamily
IPR008927	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
IPR006115	6-phosphogluconate dehydrogenase, NADP-binding
IPR013328	6-phosphogluconate dehydrogenase, domain 2
IPR015815	3-hydroxyisobutyrate dehydrogenase-related
IPR029154	3-hydroxyisobutyrate dehydrogenase-like, NAD-binding domain

trEMBL

trEMBL term	Description
A0A072TUY6	_

SwissProt

SwissProt term	Description
3HID1_ARATH	Probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial

KEGG

KO	Description	Enzyme
K00020	3-hydroxyisobutyrate dehydrogenase	[EC: 1.1.1.31]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G29120	6-phosphogluconate dehydrogenase family protein
Medicago sativa L.	MsG0080048654.01.T01	_
Oryza sativa L.	LOC_Os01g53910.1	dehydrogenase, putative, expressed
Cucumis sativus L.	Csa009179	_
Glycyrrhiza uralensis Fisch.	Glyur000324s00015429.1	_
Codonopsis lanceolata	Cl_chr08_33990T	_
Arachis hypogaea L.	AH03G20010.1	Probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial like

Expression pattern