| Gene ID | Annotation |
|---|---|
| Am05G032550.1 | chromatin remodeling 4 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G032550.1 | mRNA | Chr05 | 159954797 | 159971568 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00176.26 | SNF2-rel_dom | 773 | 1048 | 9.80E-66 |
| PF00385.27 | Chromo | 664 | 710 | 1.40E-16 |
| PF00271.34 | Helicase_C | 1075 | 1185 | 1.80E-16 |
| PF04851.18 | ResIII | 755 | 926 | 1.60E-11 |
| PF00628.32 | PHD | 84 | 126 | 1.70E-09 |
| PF06465.16 | DUF1087 | 1372 | 1408 | 3.70E-07 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Others |
| Ubiquitin Family | PHD |
| Epigenetic Regulators | CHR4 |
| Transcription Factors Family | PHD |
| Transcription Factors Family | SNF2 |
| GO term | Description | Category |
|---|---|---|
| GO:0032259 | methylation | Biological Process |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0003677 | DNA binding | Molecular Function |
| GO:0003700 | DNA-binding transcription factor activity | Molecular Function |
| GO:0008168 | methyltransferase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR019786 | Zinc finger, PHD-type, conserved site |
| IPR001965 | Zinc finger, PHD-type |
| IPR019787 | Zinc finger, PHD-finger |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR000330 | SNF2, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR009057 | Homeobox-like domain superfamily |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR009463 | Domain of unknown function DUF1087 |
| IPR016197 | Chromo-like domain superfamily |
| IPR000953 | Chromo/chromo shadow domain |
| IPR023780 | Chromo domain |
| trEMBL term | Description |
|---|---|
| A0AAN9MS45 | _ |
| SwissProt term | Description |
|---|---|
| CHR4_ARATH | Protein CHROMATIN REMODELING 4 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G44800 | chromatin remodeling 4 |
| Medicago sativa L. | MsG0480022801.01.T01 | _ |
| Oryza sativa L. | ChrUn.fgenesh.mRNA.85 | expressed protein |
| Cucumis sativus L. | Csa014880 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000261s00014351.1 | _ |
| Codonopsis lanceolata | Cl_chr01_56080T | _ |
| Arachis hypogaea L. | AH03G46970.2 | Protein CHROMATIN REMODELING 4 like |