Gene detail

Detail information of Am05G032250.1 Annotation

Gene ID	Annotation
Am05G032250.1	Leucine-rich repeat transmembrane protein kinase

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am05G032250.1	mRNA	Chr05	159161282	159165166	-

Sequences

CDS:

>Am05G032250.1
ATGAGGATTTCAACACTAGCACTAGTTTTGTTCCTTGTGTGCTTTTCTTCTATGTTGCTAATTGGTGAGGGTAACTTAGATAAAGATACAACTTTGAAAATGCTTTTGGAAGTGAAAAGGTCATTTCTTGAAGACCCACAAAATGTTTTGAGTGATTGGTCAGAGAACAACACTGACTATTGCAGTTGGAGAGGAGTGTCATGTGACTCGGTACAAGTGGTGGGTCTCGACCTTGCTGACTCGTCCCTCACTGGGTCAATTTCACCTTCACTCGGTCGTTTGCAAAACTTGGTCCACCTTGATCTCTCTTCAAATAGTCTCACAGGTTCTATTCCACCGAATCTCTCTACCCTTGTTTCTTTGGAATCCTTACTTCTTTTCTCTAACCAACTCACTGGTTCAATTCCCATTGAGTTGGGCTCGCTCACGAGTCTCCAAGTCATGCGACTCGGTAATAATGAACTAACGGGTATGATTCCCGCATCTCTTGGGAACCTTTTTAATTTAGTTACTCTTGGTCTTGCTTCAAGTGGACTCACTGGGTCGATTCCACGTGAGCTCGGGCAACTCAATTTCATGGAGAATTTAATTCTGGATGAAAACGAGTTGATAGGTCTGATTCCGCCCGAGTTGGGGAACTGCTCAAGCCTCACCAATTTCACTGCATCCAACAACAAACTCAACGGCTCAATTCCGAGCGAACTGAGTCAACTCAAGAATATACACCTTTTCAACCTTGGCAATAACAGTTTATCAGGGGAGATTCCGAGTCAACTCGGTGAAATGAGCTCACTCATTTACCTTAATTTCATGGGAAACCAACTTGAGGGTATAATTCCACCGTCTTTATCTCAACTGAGTAATCTTCAAATTCTTGACTTGTCCATGAATAATCTCAGTGGAGGAATTCCAAAGGAGTTTGGCAACATGGGTCAACTAAATTACATGGTTCTTTCTAGTAACGACCTCAATAGTGTGATACCAAAAACTATATGTTCCAATGCAACAAATTTGGAACATTTGATGTTATCAGATAGTGGACTTTATGGTCAGGTTCCAGTTGAGTTGAGTCAATGTCATTCACTAAAACAACTTGATTTGTCAAACAATTCACTCATCGGGTTCATACCTCTTCAGCTGTATGAGTTGATTGGGTTAACTGATCTCTCTCTCAACAATAACAGTTTGGTTGGTTCTATATCTCCTTTTATAGGTAACCTCAGTAACTTAAAAACACTTGCTTTGTATCACAATAATTTGCAAGGTGCTTTGCCTAGAGAGATTGGAATGCTTGCCAAGTTGGAAATTTTATATCTTTATGATAATCAATTATTTGGGGCTATACCTTTAGAGATTGGTAACTGTTCTAGCTTGCAGATGATTGATTTCTTTGGAAACCGTTTCAGTGGGGAGATTCCCATTACTATTGGAAAGCTAAAAGAGTTGAATTTCATTCATCTTAGACAGAATGAGCTTGTGGGTGAGATTCCTTCCACTCTGGGTAAATGTCATAAGCTGAATATCTTGGATTTGGCTGATAATCAGCTTTCTGGTGCAATTCCTGCAACATTTGGATTCCTCAAGTCATTGCAGCAGCTCATGCTCTACAACAATTCTCTTGAAGGTAATCTTCCTCACCAACTGATATATGTAGCAAACTTGACAAGAGTGAATCTTTCAAAGAATAGATTGAATGGTAGTATAGCTGCATTGTGTAGCTCTCGATCCTTTCTTTCTTTTGATGTTACCAACAATGAGTTTGACGGTGAAATTCCGCCTCAACTGGGAAACTCACACTCTCTTCAGAGGCTAAGATTAGGTAACAACAAATTTTCCGGTGAAATTCCTAGGACGTTGGGAAAAATCCACGAGTTGTCGTTGTTAGACCTCTCTGGAAATTCGCTTACCGGTCCAATACCAGAAGAGCTTTCTTTGTGTAAAAAACTGACTTACATTGATCTAAGCAGTAATTTTCATTTTGGGGAAGTACCATCGTGGCTTGGAAGTTTGCCTCAGTTAGGAGAGCTTAAGCTCTCTTCCAACAACTTTTCTAGACCTCTTCCATTAGGCCTATTCAAATGTTCCAATTTACTTGTTCTTTCACTGAATGACAACTCATTCAATGGAAGTCTCCCAGCTAATATTGGTGATCTTGCATATCTTAATGTTCTTAGACTTGACCACAATAAGTTCTCTGGACCAATCCCTCAGGAGATAGGTAAGTTGAGCAAGCTTTATGAGCTCCAACTCTCAAGGAATAACTTCAATGGTGAGGTGCCAAATGAGATAGGAAAACTTCAAAATCTCCAAATCATTTTAGACACCAGTTACAACAATCTCTCAGGTCATATCCCACCTTCTCTTGGGACTCTTTCAAAATTAGAAGCACTTGATCTTTCACACAATCAACTTATTGGGGAAATCCCTCCACAAGTTGGTGAAATGACCAGCTTGGGAAAGCTTGATCTCTCTTACAACAACCTTCAGGGAAAGTTGGACAAGCGATTCTCTCGCTGGCCAAACGTGGCTTTTGAAGGAAATATACATCTTTGCGGAAGCCCTCTTGATCGCTGCGACGGTGAACATACTTCAGACAGACAACAACCAAGGTTAAGTGAGTCATCAGTAGTGATAATATCCGTTATTTCAACTTTAGGTGCAGTCGCGCTATTGATACTTTCTGTGAGACTCTTCTGCAAAAACAAGAAAGAGTTCTTAAGGCAAGACAACAAAGTAACTTATCTCTACTCTTCCTCTTCATCACAAGCACAAAGACGACCGCTTTTCCACCTTAATGCTACGGGAAAGAGAGATTTCAAGTGGGAAGATATCATGGATGCGACGAACAATCTAAATGATGACTTCATGATTGGTTCAGGAGGTTCAGGAAAAATCTACAAAGCGGAATTGGCCACTGGAGAGATTATTGCTGTTAAGAAAATTTCATCAAAAGATGAACTTCTTTTGAACAAAAGCTTTGTAAGAGAAGTTAAGACATTGGGGAGGATAAGGCATAGACATCTGGTGAAACTAATAGGATTTTGTAACAATAGAAATAAAGGAGCAGAGTGGAATTTGCTGATATATGAGTACATGGAAAATGGAAGTCTATGGGATTGGCTTCATGGGAAACCAGTCAATGTGAGCAAAATAAGGAACAACCTTGATTGGGAAACAAGGTTCAAAATTGTTGTGGGATTAGCTCAAGGAGTTGAATACCTACATCATGATTGTGTGCCAAAGATTATTCACAGGGACATTAAATCAAGCAACATATTGCTAGATTCCAAAATGGAAGCACACTTGGGAGATTTTGGATTAGCAAAAGAACTCATTGAGAATCATGAATCTGCTACCGCTACTGAGTCCAATTCTTGTTTTGTAGGGTCATATGGCTACATGGCTCCAGAATATGCATTCTCTCTAGGGGCAACAGAAAAAAGTGATGTTTACAGTATGGGAATAGTGCTTATGGAACTTGTCAGTGGTAAATTGCCAACAAGTGATACTTTTGGAGCAGAGATGGACATGGTGAGATGGGTAGAGATGCATATTAATATGCATGGCTCTGCAAGTGAGAAATTGGTAGATTCTGAACTGAAACCTCTTTTACCCGGTGATGAATTTGCTGCAATCCAAGTGCTTGAGATAGCCTTGCAATGCACGAAAGCTACACCACAGGAGAGACCATCTTCAAGGAAAGTATGCGATCTTCTCCTCCATGTATTCAATAACAGAAAGATGGGTTTTGAGAAGATGAATGTGGATCGTTGTAAGTAA

Protein:

>Am05G032250.1
MRISTLALVLFLVCFSSMLLIGEGNLDKDTTLKMLLEVKRSFLEDPQNVLSDWSENNTDYCSWRGVSCDSVQVVGLDLADSSLTGSISPSLGRLQNLVHLDLSSNSLTGSIPPNLSTLVSLESLLLFSNQLTGSIPIELGSLTSLQVMRLGNNELTGMIPASLGNLFNLVTLGLASSGLTGSIPRELGQLNFMENLILDENELIGLIPPELGNCSSLTNFTASNNKLNGSIPSELSQLKNIHLFNLGNNSLSGEIPSQLGEMSSLIYLNFMGNQLEGIIPPSLSQLSNLQILDLSMNNLSGGIPKEFGNMGQLNYMVLSSNDLNSVIPKTICSNATNLEHLMLSDSGLYGQVPVELSQCHSLKQLDLSNNSLIGFIPLQLYELIGLTDLSLNNNSLVGSISPFIGNLSNLKTLALYHNNLQGALPREIGMLAKLEILYLYDNQLFGAIPLEIGNCSSLQMIDFFGNRFSGEIPITIGKLKELNFIHLRQNELVGEIPSTLGKCHKLNILDLADNQLSGAIPATFGFLKSLQQLMLYNNSLEGNLPHQLIYVANLTRVNLSKNRLNGSIAALCSSRSFLSFDVTNNEFDGEIPPQLGNSHSLQRLRLGNNKFSGEIPRTLGKIHELSLLDLSGNSLTGPIPEELSLCKKLTYIDLSSNFHFGEVPSWLGSLPQLGELKLSSNNFSRPLPLGLFKCSNLLVLSLNDNSFNGSLPANIGDLAYLNVLRLDHNKFSGPIPQEIGKLSKLYELQLSRNNFNGEVPNEIGKLQNLQIILDTSYNNLSGHIPPSLGTLSKLEALDLSHNQLIGEIPPQVGEMTSLGKLDLSYNNLQGKLDKRFSRWPNVAFEGNIHLCGSPLDRCDGEHTSDRQQPRLSESSVVIISVISTLGAVALLILSVRLFCKNKKEFLRQDNKVTYLYSSSSSQAQRRPLFHLNATGKRDFKWEDIMDATNNLNDDFMIGSGGSGKIYKAELATGEIIAVKKISSKDELLLNKSFVREVKTLGRIRHRHLVKLIGFCNNRNKGAEWNLLIYEYMENGSLWDWLHGKPVNVSKIRNNLDWETRFKIVVGLAQGVEYLHHDCVPKIIHRDIKSSNILLDSKMEAHLGDFGLAKELIENHESATATESNSCFVGSYGYMAPEYAFSLGATEKSDVYSMGIVLMELVSGKLPTSDTFGAEMDMVRWVEMHINMHGSASEKLVDSELKPLLPGDEFAAIQVLEIALQCTKATPQERPSSRKVCDLLLHVFNNRKMGFEKMNVDRCK*

Promoter(3k):

>AM05G032250.1
AAGGAATAATTTGCAAGGAGATGCTAGCAGTTTTTAACTTAATAGTACTAGCTAGTAAACTACTTACATATCTCTTAAATTTATATGGACTTGTTAAAAAAAAATTGCTAAAGTTATTGCTTAACTATATCGAGAGATTGGATGAATCTAAAACAATACTGTATCAGCAAATGCTTAGCAGTTAGCAGTTGATATCTATAGCAGTAATCTAAAGAATTATGCATTGCCTTATCCTACGAAGTATTTTTACATGCATGAAAATTTCTTTACAATTTTTCTTAGCCAAGCAGAAACTTATACCTAGTTTTGATGCAGGTTCATGCGTCATTCCTCCTGATTCGGTACTCTTATTTGATGTGGAGTTTGTTAGCAAAGCTTGATTTACTAGTCAAATTGCCTTCCTTTCTCATGGAGATTGGAGCATAGATTAATATTGTTTTGTCCCTTTTGATTTACATGTTCAATGGCTGTGATATTATCCAATGCAAAGTGATCATAATTTCAGCATTGTAATCCATAGAGGAGCAATAGGTTAGCTGTTTGTCACAAACTTGGTCCTGTACTTATGCACTGACAGTCACAACGGTGGTATTCATTTCTGTGTTACTAAGGTAATGGCACCTGCATGTGTAGACACAAAATTTTGTAAATAATTACTCGTACCCATGTCGTTATCCATTAAATGGATGGATAATTATCCATCCTATCTATCTATTGTGAATCATTTGTGAGTAGTGTCCATAGGGTATAATACCGGGGGCCAACTAGGAAATAATATAAAAGGGTTCACACTATATAAGCAGTCGCAGATGCTCATACAGAGAAGCCAGGCATTATTATAATATATCCACCTAAGTGTAGTAGGATAAATACGAACAAAAGGCCATTAAAAATGAAGGTGTATATGCTCAGACAAGTCTTAATATAAGATGCTGTCATTGTAAGGGTAATTTAGTTTATGATGGATATAAGCCCGTGAAATATAGGATAGGTTTTGAAGGTAAAGAGGGTCCTCATTTGTATCAGTAATTAATGTTTATAAAATCAAATAAAATAGAATTGAAATGCTATATGATCATCTATCATGTTATTTATCTTTTTAAAAATCTCAGACACATATCAGCTTAAAGATTTTGCCTTTCAAAATCCTCAAAGAATCTTGATCCCATGTTGGTTTTCTAAGTACAGCCAATACAGAGAAGGGTTAATTTTCTATCAGATTCTCTGTTTTCTAACATCAACTTATGTTCCAGTGAAAGGACACAAAGTGTTTTCCTCATAGTTATCTCAACATTCTTTATTCTTCATTTATTGTTGTTACTTGTTTTCATTTTGGCTAATTTAGTTAGAATTGGATATGTATTTTATTAATCCCTATAAGGATAAATATCTAATATCACAACCCGTACTTGGTGGGTGGTACAAAAGTTTTCTACACTCGTATACTAAAAAATTTGAAATTCAACAAGGTTAAAATTGACTTACCCATCCCAATTTGTTGGAACTGTTGTGTGGGAATTGAAAAAATCTTACATTAGATAGACTAAGCACTTCTATAGTGTTTATAAATGGGAATCTCATCTATTGGGTTGGGCCCCAAGGGGTACCCAATTTTGTGGATGGGAGAGGACATACACAAAATGACCACCACACACGCGCGCGCACCGCTGCCGTCCGGCCAGGCTGAGTGGTGCACTTATTTTTTTCAGAATTTTTTTTATTATCTGTTTGACCGTTGACTATTAACTAAGCCATTTGTAACGGTTTTGCATTGAATTTGTAACAAATATTTTTTCCATTAATCTTCCAACGGTTTTGTCTCCCCTTAGAGCTGTTGGCTTTTAATTCCTTGCCAATGGATTCACTCTCAAAAGCCTATAAAAGGAGACATTCCCCTCACTTGCAAAACACACCAAGCTTGACGATAAAGCATCTCTCCTCAAGTTTTTTTCTCATCTCTCTAAACTTCTTTGTTCTTCTCTAGAAAGCTTGAAGCATTTCCAAGCTAAAGAGTGATTTTCATAACCATATTGAGGGTGTATATCTTAGAGCGAATTTTCACGGTGCAGTGAACTTTCGTAGCATATTGAGGGTACTTAAGAGTGTCTATTGTGACACATCTCTCTTTCTTGGGAACCTACTCGAATTAACACAATTAGATTAAACATTTCTAGTTAGCTTGCGACAGGTTTGGAACAATGGACACAAACAAACCAGGATAACATTAATTAGCAAAATTTTCATCATTTATTAGGACAACAGTTCCATTATTGAGTGGCTAAACGACTAAAAACCAGAAGGCCAGGCTTTTGGAGTTGGCAAAAGGGTTTTGTGCAACTAATTAGAAATAAGAAAAAGCAACAAAAGGACATTAGATTTGGTAACTCAAAACAAAAAGTTTGACGTGAAATATATAGAATTCAATTGAATATATTGGTCCCCCTTGTTATTGTATTAACATGTTATACATTATAAAACAGAAACAGAAGGAGGGTTTGTTGAAACTAACTTCACCATGCATGCTTGCGTGGGAATGATAATATACTCCTTTGACTTTGTATTGTATTAAAAAGGGATATTGAACTGCTCACTTTTTCACTACTACTCTCTCAATTTATGTTCAGCTAGCTACGACACTCAATAAGGGAAACCCACTACAACTATCTATGGATCACCCACCTACTGTTTTATTGCTTATGCATACATGCAAGTACTTATTTTCCTTATATATCCAATGCTGTTGACTTTCTCAAATATCTCATTTGCTCATCTCTCATACGCATGCAGCAGGTACTCAGATTACTACAGACTCATCTGATCTCCAATGCATGCATGTGCATCATCCTATTTGCTCTGCTATCACATTTACACACTCACTTCAAGATCACCATAAAAGCACACCTATCCCATGCAATATCTCTATATCTTCACCATTAGCAACAATTCTCAGTTCAACTTGAACCCAAGAGAATCCTGTTGCAAAGTTGAGTCTTTTCTATA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF13855.9	LRR_8	265	323	4.10E-50
PF13855.9	LRR_8	385	444	4.10E-50
PF13855.9	LRR_8	505	564	4.10E-50
PF13855.9	LRR_8	600	657	4.10E-50
PF00069.28	Pkinase	956	1236	9.50E-47
PF07714.20	PK_Tyr_Ser-Thr	956	1237	1.30E-41
PF08263.15	LRRNT_2	34	69	2.40E-11

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.12.4:RLK-Pelle_LRR-XI-1

Gene Ontology

GO term	Description	Category
GO:0071944	cell periphery	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0000165	MAPK cascade	Biological Process
GO:0033612	receptor serine/threonine kinase binding	Molecular Function
GO:0032440	2-alkenal reductase [NAD(P)+] activity	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR003591	Leucine-rich repeat, typical subtype
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A8B8KHL0	_

SwissProt

SwissProt term	Description
GSO1_ARATH	LRR receptor-like serine/threonine-protein kinase GSO1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G20140	Leucine-rich repeat transmembrane protein kinase
Medicago sativa L.	MsG0280008066.01.T01	_
Oryza sativa L.	LOC_Os07g31500.1	leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed
Cucumis sativus L.	Csa014398	_
Glycyrrhiza uralensis Fisch.	Glyur000234s00015068.1	_
Codonopsis lanceolata	Cl_chr02_45300T	_
Arachis hypogaea L.	AH03G47470.1	LRR receptor-like serine/threonine-protein kinase GSO1 like

Expression pattern