| Gene ID | Annotation |
|---|---|
| Am05G032150.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am05G032150.1 | mRNA | Chr05 | 158818540 | 158822230 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 209 | 253 | 3.50E-138 |
| PF13041.9 | PPR_2 | 244 | 290 | 3.50E-138 |
| PF13041.9 | PPR_2 | 279 | 328 | 3.50E-138 |
| PF13041.9 | PPR_2 | 314 | 363 | 3.50E-138 |
| PF13041.9 | PPR_2 | 349 | 398 | 3.50E-138 |
| PF13041.9 | PPR_2 | 391 | 432 | 3.50E-138 |
| PF13041.9 | PPR_2 | 525 | 573 | 3.50E-138 |
| PF13041.9 | PPR_2 | 560 | 595 | 3.50E-138 |
| PF13041.9 | PPR_2 | 594 | 640 | 3.50E-138 |
| PF13041.9 | PPR_2 | 665 | 701 | 3.50E-138 |
| PF12854.10 | PPR_1 | 276 | 308 | 1.00E-112 |
| PF12854.10 | PPR_1 | 311 | 343 | 1.00E-112 |
| PF12854.10 | PPR_1 | 345 | 377 | 1.00E-112 |
| PF12854.10 | PPR_1 | 381 | 412 | 1.00E-112 |
| PF12854.10 | PPR_1 | 416 | 445 | 1.00E-112 |
| PF12854.10 | PPR_1 | 556 | 588 | 1.00E-112 |
| PF01535.23 | PPR | 282 | 312 | 9.70E-109 |
| PF01535.23 | PPR | 317 | 347 | 9.70E-109 |
| PF01535.23 | PPR | 352 | 381 | 9.70E-109 |
| PF01535.23 | PPR | 387 | 417 | 9.70E-109 |
| PF01535.23 | PPR | 422 | 451 | 9.70E-109 |
| PF01535.23 | PPR | 528 | 557 | 9.70E-109 |
| PF01535.23 | PPR | 562 | 591 | 9.70E-109 |
| PF01535.23 | PPR | 598 | 627 | 9.70E-109 |
| PF01535.23 | PPR | 633 | 661 | 9.70E-109 |
| PF13812.9 | PPR_3 | 267 | 326 | 4.60E-70 |
| PF13812.9 | PPR_3 | 339 | 395 | 4.60E-70 |
| PF13812.9 | PPR_3 | 374 | 429 | 4.60E-70 |
| PF13812.9 | PPR_3 | 450 | 494 | 4.60E-70 |
| PF13812.9 | PPR_3 | 513 | 569 | 4.60E-70 |
| PF13812.9 | PPR_3 | 548 | 604 | 4.60E-70 |
| PF17177.7 | PPR_long | 262 | 365 | 2.40E-34 |
| PF17177.7 | PPR_long | 369 | 480 | 2.40E-34 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
| GO term | Description | Category |
|---|---|---|
| GO:0009507 | chloroplast | Cellular Component |
| GO:0090615 | mitochondrial mRNA processing | Biological Process |
| GO:0036002 | pre-mRNA binding | Molecular Function |
| GO:0005739 | mitochondrion | Cellular Component |
| GO:0004519 | endonuclease activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A1S2YHR9 | _ |
| SwissProt term | Description |
|---|---|
| PP143_ARATH | Putative pentatricopeptide repeat-containing protein At2g02150 |
| KO | Description | Enzyme |
|---|---|---|
| K17710 | pentatricopeptide repeat domain-containing protein 1 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G02150 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0480022851.01.T01 | _ |
| Oryza sativa L. | LOC_Os06g36910.1 | pentatricopeptide, putative, expressed |
| Cucumis sativus L. | Csa019995 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000234s00015079.1 | _ |
| Codonopsis lanceolata | Cl_chr02_32070T | _ |
| Arachis hypogaea L. | AH13G50280.1 | Putative pentatricopeptide repeat-containing protein At2g02150 like |